RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 FNDC5Q8NAU1 212 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 GOT1L1Q8NHS2 421 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 FBXO30Q8TB52 745 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 FAM222BQ8WU58 562 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 OR5P2Q8WZ92 322 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 TUBGCP3Q96CW5 907 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 LRRC46Q96FV0 321 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 PGM2Q96G03 612 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 STACQ99469 402 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 SORT1Q99523 831 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 PIGQQ9BRB3 760 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 TBL1XR1Q9BZK7 514 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 ACBD3Q9H3P7 528 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 PIGUQ9H490 435 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 CXorf36Q9H7Y0 433 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 PTGES2Q9H7Z7 377 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 ZCCHC3Q9NUD5 404 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 ATAD3AQ9NVI7 634 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 GPATCH2Q9NW75 528 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 FBXO34Q9NWN3 711 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 CRIM1Q9NZV1 1036 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 EGFL7Q9UHF1 273 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 ZNF337Q9Y3M9 751 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 AKAP9Q99996 3911 aa8.19□□□□□ -1.1
PDLIM5-209ENST00000506632 A0A1W2PNV4 684 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 A0A1W2PQD3 144 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 WDR91A4D1P6 747 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 C7orf72A4D263 438 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 EEF1E1-BLOC1S5C9J1V9 151 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 H0YC42 278 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 EEF1E1O43324 174 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 TNFRSF21O75509 655 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 SNUPNO95149 360 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 ZWINTO95229 277 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 C6orf47O95873 294 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 CRHP06850 196 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 ALOX5P09917 674 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 TCEA1P23193 301 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 PSMA4P25789 261 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 CCT3P49368 545 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 PCYT1AP49585 367 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 SUCLG1P53597 346 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 TPD52P55327 224 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 CLDN8P56748 225 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 CLDN20P56880 219 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 EEF1A1P68104 462 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 POU6F2P78424 691 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 OCRLQ01968 901 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 MAD2L1Q13257 205 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 LASP1Q14847 261 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 DAZAP2Q15038 168 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 PDCD2Q16342 344 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 LSM12Q3MHD2 195 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 CEP85LQ5SZL2 805 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 EEF1A1P5Q5VTE0 462 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 RAET1LQ5VY80 246 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 CDC73Q6P1J9 531 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 FIGNL1Q6PIW4 674 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 SZRD1Q7Z422 152 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 GALNT10Q86SR1 603 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 TMEM200AQ86VY9 491 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 KIF18BQ86Y91 864 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 GRAMD2AQ8IUY3 354 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 LRRC34Q8IZ02 419 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 GCNT2Q8N0V5 402 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 METTL25Q8N6Q8 603 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 COX18Q8N8Q8 333 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 OR56A1Q8NGH5 318 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 PPP1R14CQ8TAE6 165 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 SFXN5Q8TD22 340 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 ACTRT2Q8TDY3 377 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 INTS12Q96CB8 462 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 OTUB1Q96FW1 271 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 PRPF18Q99633 342 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 KLHDC3Q9BQ90 382 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 YIPF4Q9BSR8 244 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 DUSP26Q9BV47 211 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 BTBD2Q9BX70 525 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 BHLHE41Q9C0J9 482 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 PIGMQ9H3S5 423 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 HHATLQ9HCP6 504 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 NEUROD4Q9HD90 331 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 UBQLN4Q9NRR5 601 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 RASSF1Q9NS23 344 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 NOP53Q9NZM5 478 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 EIF3LQ9Y262 564 aaKnown RBP8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 RAP2CQ9Y3L5 183 aa8.18□□□□□ -1.1
PDLIM5-209ENST00000506632 HRNRQ86YZ3 2850 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 A0A087WZY1 265 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 SLC22A20A6NK97 555 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 A6NNC1 897 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 A8MXE2 369 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 NPIPB9F8W1W9 429 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 ANKRD28O15084 1053 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 NDUFB5O43674 189 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 SCN2BO60939 215 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 SOX30O94993 753 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 MYZAPP0CAP1 466 aa8.17□□□□□ -1.1
PDLIM5-209ENST00000506632 ZNF17P17021 662 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms