RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 PSMB1P20618 241 aaKnown RBP14.88□□□□□ -0.03
SCLT1-208ENST00000506368 PAICSP22234 425 aaKnown RBP14.88□□□□□ -0.03
SCLT1-208ENST00000506368 RGS19P49795 217 aa14.88□□□□□ -0.03
SCLT1-208ENST00000506368 MECP2P51608 486 aaKnown RBP14.88□□□□□ -0.03
SCLT1-208ENST00000506368 CCR9P51686 369 aa14.88□□□□□ -0.03
SCLT1-208ENST00000506368 ZMYND11Q15326 602 aa14.88□□□□□ -0.03
SCLT1-208ENST00000506368 ETFDHQ16134 617 aa14.88□□□□□ -0.03
SCLT1-208ENST00000506368 ZNF791Q3KP31 576 aaPredicted RBP14.88□□□□□ -0.03
SCLT1-208ENST00000506368 C6orf120Q7Z4R8 191 aa14.88□□□□□ -0.03
SCLT1-208ENST00000506368 TMPRSS11BQ86T26 416 aa14.88□□□□□ -0.03
SCLT1-208ENST00000506368 RBM45Q8IUH3 476 aaKnown RBP14.88□□□□□ -0.03
SCLT1-208ENST00000506368 SLC44A3Q8N4M1 653 aa14.88□□□□□ -0.03
SCLT1-208ENST00000506368 ZNF527Q8NB42 609 aa14.88□□□□□ -0.03
SCLT1-208ENST00000506368 OR4F15Q8NGB8 312 aa14.88□□□□□ -0.03
SCLT1-208ENST00000506368 POF1BQ8WVV4 589 aa14.88□□□□□ -0.03
SCLT1-208ENST00000506368 ATOH1Q92858 354 aaPredicted RBP14.88□□□□□ -0.03
SCLT1-208ENST00000506368 ALG14Q96F25 216 aa14.88□□□□□ -0.03
SCLT1-208ENST00000506368 TREX2Q9BQ50 279 aaPredicted RBP14.88□□□□□ -0.03
SCLT1-208ENST00000506368 ZCCHC4Q9H5U6 513 aa14.88□□□□□ -0.03
SCLT1-208ENST00000506368 NDRG3Q9UGV2 375 aa14.88□□□□□ -0.03
SCLT1-208ENST00000506368 PCP4L1A6NKN8 68 aa14.87□□□□□ -0.03
SCLT1-208ENST00000506368 FAM25EA8MYX2 175 aa14.87□□□□□ -0.03
SCLT1-208ENST00000506368 SELENOFO60613 162 aa14.87□□□□□ -0.03
SCLT1-208ENST00000506368 GALR3O60755 368 aaPredicted RBP14.87□□□□□ -0.03
SCLT1-208ENST00000506368 KCNJ13O60928 360 aa14.87□□□□□ -0.03
SCLT1-208ENST00000506368 SERPINA3P01011 423 aa14.87□□□□□ -0.03
SCLT1-208ENST00000506368 ALDOBP05062 364 aa14.87□□□□□ -0.03
SCLT1-208ENST00000506368 IL3P08700 152 aa14.87□□□□□ -0.03
SCLT1-208ENST00000506368 CD3GP09693 182 aa14.87□□□□□ -0.03
SCLT1-208ENST00000506368 H2AFB1P0C5Y9 115 aa14.87□□□□□ -0.03
SCLT1-208ENST00000506368 CXCL2P19875 107 aa14.87□□□□□ -0.03
SCLT1-208ENST00000506368 FRKP42685 505 aaPredicted RBP14.87□□□□□ -0.03
SCLT1-208ENST00000506368 TRAM2Q15035 370 aa14.87□□□□□ -0.03
SCLT1-208ENST00000506368 MLC1Q15049 377 aa14.87□□□□□ -0.03
SCLT1-208ENST00000506368 PRAMEF8Q5VWM4 474 aa14.87□□□□□ -0.03
SCLT1-208ENST00000506368 PRAMEF7Q5VXH5 474 aa14.87□□□□□ -0.03
SCLT1-208ENST00000506368 TNFAIP8L2Q6P589 184 aaPredicted RBP14.87□□□□□ -0.03
SCLT1-208ENST00000506368 ZC3H14Q6PJT7 736 aaKnown RBP14.87□□□□□ -0.03
SCLT1-208ENST00000506368 PXKQ7Z7A4 578 aa14.87□□□□□ -0.03
SCLT1-208ENST00000506368 TSPAN33Q86UF1 283 aa14.87□□□□□ -0.03
SCLT1-208ENST00000506368 SORCS1Q8WY21 1168 aa14.87□□□□□ -0.03
SCLT1-208ENST00000506368 SMPDL3AQ92484 453 aa14.87□□□□□ -0.03
SCLT1-208ENST00000506368 TMEM159Q96B96 161 aa14.87□□□□□ -0.03
SCLT1-208ENST00000506368 TMEM169Q96HH4 297 aa14.87□□□□□ -0.03
SCLT1-208ENST00000506368 UTP23Q9BRU9 249 aaKnown RBP14.87□□□□□ -0.03
SCLT1-208ENST00000506368 EGLN3Q9H6Z9 239 aa14.87□□□□□ -0.03
SCLT1-208ENST00000506368 GPR52Q9Y2T5 361 aa14.87□□□□□ -0.03
SCLT1-208ENST00000506368 CCDC88CQ9P219 2028 aa14.87□□□□□ -0.03
SCLT1-208ENST00000506368 A0A0G2JK05 382 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 SYT5O00445 386 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 COCHO43405 550 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 SIGLEC6O43699 453 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 HRGP04196 525 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 FPR3P25089 353 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 OR1G1P47890 313 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 CCR6P51684 374 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 MANFP55145 182 aaKnown RBP14.86□□□□□ -0.03
SCLT1-208ENST00000506368 ERVK-21P61565 698 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 GK2Q14410 553 aaPredicted RBP14.86□□□□□ -0.03
SCLT1-208ENST00000506368 SLBPQ14493 270 aaKnown RBP eCLIP14.86□□□□□ -0.03
SCLT1-208ENST00000506368 ZSWIM7Q19AV6 140 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 PABPC1L2AQ5JQF8 200 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 GLDNQ6ZMI3 551 aaPredicted RBP14.86□□□□□ -0.03
SCLT1-208ENST00000506368 SHFQ7M4L6 423 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 NEIL2Q969S2 332 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 SIPA1Q96FS4 1042 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 GPA33Q99795 319 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 SARGQ9BW04 601 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 SLC25A32Q9H2D1 315 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 MCCC2Q9HCC0 563 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 OR6C2Q9NZP2 312 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 MGAT4CQ9UBM8 478 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 ZNF840PA6NDX5 716 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 H7C4K7 107 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 TBL1XO60907 577 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 TOXO94900 526 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 HPXP02790 462 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 LPLP06858 475 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 KLK1P06870 262 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 GABRA1P14867 456 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 RAB3BP20337 219 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 SHC1P29353 583 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 RORAP35398 523 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 CSKP41240 450 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 SPINT3P49223 89 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 MRPS10P82664 201 aaKnown RBP14.86□□□□□ -0.03
SCLT1-208ENST00000506368 PTSQ03393 145 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 HLXQ14774 488 aaPredicted RBP14.86□□□□□ -0.03
SCLT1-208ENST00000506368 SYTL3Q4VX76 610 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 MEIOBQ8N635 442 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 BEST4Q8NFU0 473 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 PIGXQ8TBF5 258 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 CXorf58Q96LI9 332 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 PINK1Q9BXM7 581 aa14.86□□□□□ -0.03
SCLT1-208ENST00000506368 TMEM121BQ9BXQ6 578 aaPredicted RBP14.86□□□□□ -0.03
SCLT1-208ENST00000506368 ARPC4-TTLL3A0A0A6YYG9 625 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 OR2M5A3KFT3 312 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 NEDD8-MDP1E9PL57 170 aa14.85□□□□□ -0.03
SCLT1-208ENST00000506368 DNASE2O00115 360 aaPredicted RBP14.85□□□□□ -0.03
SCLT1-208ENST00000506368 CREBL2O60519 120 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms