RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 SFTPBP07988 381 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 MELTFP08582 738 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 ITGA5P08648 1049 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 ADRA2AP08913 450 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 MYZAPP0CAP1 466 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 COX7A2P14406 83 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 ZNF12P17014 697 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 HK1P19367 917 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 HOXD3P31249 432 aaPredicted RBP2.83□□□□□ -1.96
TCOF1-208ENST00000506063 NTF4P34130 210 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 RPL22P35268 128 aaKnown RBP2.83□□□□□ -1.96
TCOF1-208ENST00000506063 CDKN2BP42772 138 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 MTNR1AP48039 350 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 MARCKSL1P49006 195 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 MMP16P51512 607 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 CLCN7P51798 805 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 EIF3EP60228 445 aaKnown RBP2.83□□□□□ -1.96
TCOF1-208ENST00000506063 LCN2P80188 198 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 HGFACQ04756 655 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 CDH17Q12864 832 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 ZNF154Q13106 437 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 NAE1Q13564 534 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 ACAP2Q15057 778 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 GABRA6Q16445 453 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 NNATQ16517 81 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 SGCBQ16585 318 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 ZNF239Q16600 458 aaKnown RBP2.83□□□□□ -1.96
TCOF1-208ENST00000506063 SLC9B1Q4ZJI4 515 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 FAM205BPQ63HN1 556 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 FRG2Q64ET8 278 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 PTRHD1Q6GMV3 140 aaKnown RBP2.83□□□□□ -1.96
TCOF1-208ENST00000506063 DARS2Q6PI48 645 aaKnown RBP2.83□□□□□ -1.96
TCOF1-208ENST00000506063 AGTRAPQ6RW13 159 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 MFSD7Q6UXD7 560 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 ZNF620Q6ZNG0 422 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 BBS12Q6ZW61 710 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 ST13P4Q8IZP2 240 aaPredicted RBP2.83□□□□□ -1.96
TCOF1-208ENST00000506063 LYG1Q8N1E2 194 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 TMEM86BQ8N661 226 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 C11orf44Q8N8P7 122 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 PRELID2Q8N945 189 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 TRPV3Q8NET8 790 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 Q8NFD4 153 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 TOR1AIP2Q8NFQ8 470 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 OR4L1Q8NH43 312 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 OR56A3Q8NH54 315 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 GSDMBQ8TAX9 411 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 LPGAT1Q92604 370 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 DYRK2Q92630 601 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 KRT35Q92764 455 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 C1GALT1C1Q96EU7 318 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 RCHY1Q96PM5 261 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 CITED4Q96RK1 184 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 NAP1L3Q99457 506 aaPredicted RBP2.83□□□□□ -1.96
TCOF1-208ENST00000506063 NDNQ99608 321 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 ASCL2Q99929 193 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 KLHDC3Q9BQ90 382 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 PSD2Q9BQI7 771 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 SLC30A2Q9BRI3 323 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 TBCDQ9BTW9 1192 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 FRMD8P1Q9BZ68 369 aaPredicted RBP2.83□□□□□ -1.96
TCOF1-208ENST00000506063 PRRG4Q9BZD6 226 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 MS4A7Q9GZW8 240 aaPredicted RBP2.83□□□□□ -1.96
TCOF1-208ENST00000506063 DSN1Q9H410 356 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 ACSS3Q9H6R3 686 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 CXorf36Q9H7Y0 433 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 SEC61A2Q9H9S3 476 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 EDA2RQ9HAV5 297 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 BCO1Q9HAY6 547 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 LYRM4Q9HD34 91 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 LZTFL1Q9NQ48 299 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.83□□□□□ -1.96
TCOF1-208ENST00000506063 PLA2G2EQ9NZK7 142 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 SEC14L4Q9UDX3 406 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 PURGQ9UJV8 347 aaKnown RBP2.83□□□□□ -1.96
TCOF1-208ENST00000506063 ADAMTS6Q9UKP5 1117 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 MCTS1Q9ULC4 181 aaKnown RBP2.83□□□□□ -1.96
TCOF1-208ENST00000506063 GUCA1BQ9UMX6 200 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 FOXJ3Q9UPW0 622 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 AAR2Q9Y312 384 aaKnown RBP2.83□□□□□ -1.96
TCOF1-208ENST00000506063 CAPN6Q9Y6Q1 641 aa2.83□□□□□ -1.96
TCOF1-208ENST00000506063 UQCRHLA0A096LP55 91 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 IGHV1-18A0A0C4DH31 117 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 ZNF816-ZNF321PA0A0X1KG74 233 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 HMX2A2RU54 273 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 MEGF11A6BM72 1044 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 OR6C70A6NIJ9 312 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 PGRMC1O00264 195 aaKnown RBP2.82□□□□□ -1.96
TCOF1-208ENST00000506063 TO15178 435 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 PPIHO43447 177 aaKnown RBP2.82□□□□□ -1.96
TCOF1-208ENST00000506063 ANGPTL7O43827 346 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 TSPAN2O60636 221 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 PRAMEF4O60810 478 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 IFNB1P01574 187 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 OPN1LWP04000 364 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 GBAP04062 536 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 YES1P07947 543 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 ALOX15P16050 662 aaPredicted RBP2.82□□□□□ -1.96
TCOF1-208ENST00000506063 SAT1P21673 171 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 ENPP1P22413 925 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms