RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	TSSK3	Q96PN8	268 aa		14.74	□□□□□ -0.05
DDR1-256	ENST00000505066	TACO1	Q9BSH4	297 aa	Known RBP	14.74	□□□□□ -0.05
DDR1-256	ENST00000505066	HOXD1	Q9GZZ0	328 aa		14.74	□□□□□ -0.05
DDR1-256	ENST00000505066	NGB	Q9NPG2	151 aa		14.74	□□□□□ -0.05
DDR1-256	ENST00000505066	ACSS1	Q9NUB1	689 aa	Predicted RBP	14.74	□□□□□ -0.05
DDR1-256	ENST00000505066	FAF1	Q9UNN5	650 aa	Predicted RBP	14.74	□□□□□ -0.05
DDR1-256	ENST00000505066	SNX8	Q9Y5X2	465 aa		14.74	□□□□□ -0.05
DDR1-256	ENST00000505066	IGLV3-32	A0A0A0MS00	114 aa		14.73	□□□□□ -0.05
DDR1-256	ENST00000505066		A0A1W2PPM1	405 aa		14.73	□□□□□ -0.05
DDR1-256	ENST00000505066	ALG1L2	C9J202	215 aa		14.73	□□□□□ -0.05
DDR1-256	ENST00000505066	TRIM13	O60858	407 aa		14.73	□□□□□ -0.05
DDR1-256	ENST00000505066	PSMG1	O95456	288 aa		14.73	□□□□□ -0.05
DDR1-256	ENST00000505066	NGFR	P08138	427 aa		14.73	□□□□□ -0.05
DDR1-256	ENST00000505066	PRPH2	P23942	346 aa		14.73	□□□□□ -0.05
DDR1-256	ENST00000505066	CLDN20	P56880	219 aa		14.73	□□□□□ -0.05
DDR1-256	ENST00000505066	RPL38	P63173	70 aa	Known RBP	14.73	□□□□□ -0.05
DDR1-256	ENST00000505066	LTB	Q06643	244 aa		14.73	□□□□□ -0.05
DDR1-256	ENST00000505066	BEX5	Q5H9J7	111 aa		14.73	□□□□□ -0.05
DDR1-256	ENST00000505066	CPTP	Q5TA50	214 aa		14.73	□□□□□ -0.05
DDR1-256	ENST00000505066	CLEC6A	Q6EIG7	209 aa		14.73	□□□□□ -0.05
DDR1-256	ENST00000505066	BHLHB9	Q6PI77	547 aa		14.73	□□□□□ -0.05
DDR1-256	ENST00000505066	PLEKHM3	Q6ZWE6	761 aa		14.73	□□□□□ -0.05
DDR1-256	ENST00000505066	PPP3R2	Q96LZ3	170 aa		14.73	□□□□□ -0.05
DDR1-256	ENST00000505066	ITPR3	Q14573	2671 aa		14.73	□□□□□ -0.05
DDR1-256	ENST00000505066	GXYLT2	A0PJZ3	443 aa		14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	GTPBP1	O00178	669 aa	Known RBP	14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	NKX2-2	O95096	273 aa		14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	FES	P07332	822 aa		14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	TUBB	P07437	444 aa		14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	FAM153B	P0C7A2	387 aa		14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	LINC00032	P0C843	101 aa		14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	SUCLG1	P53597	346 aa	Known RBP	14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	CARD18	P57730	90 aa		14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	RAC1	P63000	192 aa		14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	POU6F2	P78424	691 aa	Predicted RBP	14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	IFFO1	Q0D2I5	559 aa		14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	LSM12	Q3MHD2	195 aa	Known RBP	14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	FAM153C	Q494X1	144 aa		14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	TMEM201	Q5SNT2	666 aa		14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	HBM	Q6B0K9	141 aa		14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	FIGNL1	Q6PIW4	674 aa		14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	ZNF474	Q6S9Z5	364 aa	Predicted RBP	14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	ESPNL	Q6ZVH7	1005 aa		14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	EXOC3L1	Q86VI1	746 aa		14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	TDRP	Q86YL5	185 aa		14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	OR10D3	Q8NH80	312 aa		14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	OR2V1	Q8NHB1	315 aa		14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	B4GALNT2	Q8NHY0	566 aa		14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	TMEM171	Q8WVE6	324 aa		14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	GSX1	Q9H4S2	264 aa	Predicted RBP	14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	CXorf56	Q9H5V9	222 aa		14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	ZCCHC3	Q9NUD5	404 aa	Known RBP	14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	EMCN	Q9ULC0	261 aa		14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	PRRC2A	P48634	2157 aa	Known RBP	14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	CELSR1	Q9NYQ6	3014 aa		14.72	□□□□□ -0.05
DDR1-256	ENST00000505066	TLDC2	A0PJX2	215 aa		14.71	□□□□□ -0.05
DDR1-256	ENST00000505066		H0YC42	278 aa		14.71	□□□□□ -0.05
DDR1-256	ENST00000505066	TBX19	O60806	448 aa		14.71	□□□□□ -0.05
DDR1-256	ENST00000505066	OXSR1	O95747	527 aa	Predicted RBP	14.71	□□□□□ -0.05
DDR1-256	ENST00000505066	TPD52	P55327	224 aa	Predicted RBP	14.71	□□□□□ -0.05
DDR1-256	ENST00000505066	SLC18A2	Q05940	514 aa		14.71	□□□□□ -0.05
DDR1-256	ENST00000505066	ATP6AP1L	Q52LC2	224 aa		14.71	□□□□□ -0.05
DDR1-256	ENST00000505066	ANKRD34A	Q69YU3	496 aa		14.71	□□□□□ -0.05
DDR1-256	ENST00000505066	ANKRD26P1	Q6NSI1	321 aa		14.71	□□□□□ -0.05
DDR1-256	ENST00000505066	PRSS57	Q6UWY2	283 aa		14.71	□□□□□ -0.05
DDR1-256	ENST00000505066	GATS	Q8NAP1	163 aa		14.71	□□□□□ -0.05
DDR1-256	ENST00000505066	FBXO30	Q8TB52	745 aa		14.71	□□□□□ -0.05
DDR1-256	ENST00000505066	ADAMTS15	Q8TE58	950 aa		14.71	□□□□□ -0.05
DDR1-256	ENST00000505066	CIDEC	Q96AQ7	238 aa	Predicted RBP	14.71	□□□□□ -0.05
DDR1-256	ENST00000505066	SH3YL1	Q96HL8	342 aa	Predicted RBP	14.71	□□□□□ -0.05
DDR1-256	ENST00000505066	EGLN2	Q96KS0	407 aa		14.71	□□□□□ -0.05
DDR1-256	ENST00000505066	BTBD2	Q9BX70	525 aa		14.71	□□□□□ -0.05
DDR1-256	ENST00000505066	HDHD5	Q9BXW7	423 aa		14.71	□□□□□ -0.05
DDR1-256	ENST00000505066	DLL4	Q9NR61	685 aa		14.71	□□□□□ -0.05
DDR1-256	ENST00000505066	PLSCR4	Q9NRQ2	329 aa		14.71	□□□□□ -0.05
DDR1-256	ENST00000505066	FLRT3	Q9NZU0	649 aa		14.71	□□□□□ -0.05
DDR1-256	ENST00000505066	AKAP6	Q13023	2319 aa		14.71	□□□□□ -0.05
DDR1-256	ENST00000505066	ARHGAP21	Q5T5U3	1957 aa		14.71	□□□□□ -0.06
DDR1-256	ENST00000505066		A0A1W2PRB8	838 aa		14.7	□□□□□ -0.06
DDR1-256	ENST00000505066	CFLAR	O15519	480 aa		14.7	□□□□□ -0.06
DDR1-256	ENST00000505066	CXCL13	O43927	109 aa		14.7	□□□□□ -0.06
DDR1-256	ENST00000505066	TMCC2	O75069	709 aa		14.7	□□□□□ -0.06
DDR1-256	ENST00000505066	KCNK2	O95069	426 aa		14.7	□□□□□ -0.06
DDR1-256	ENST00000505066	PPP2R2B	Q00005	443 aa		14.7	□□□□□ -0.06
DDR1-256	ENST00000505066	RNPS1	Q15287	305 aa	Known RBP	14.7	□□□□□ -0.06
DDR1-256	ENST00000505066	FAM219B	Q5XKK7	198 aa		14.7	□□□□□ -0.06
DDR1-256	ENST00000505066	ALKBH2	Q6NS38	261 aa		14.7	□□□□□ -0.06
DDR1-256	ENST00000505066	MFSD12	Q6NUT3	480 aa		14.7	□□□□□ -0.06
DDR1-256	ENST00000505066	ZNF550	Q7Z398	422 aa		14.7	□□□□□ -0.06
DDR1-256	ENST00000505066	MTERF4	Q7Z6M4	381 aa	Known RBP	14.7	□□□□□ -0.06
DDR1-256	ENST00000505066	YTHDF3	Q7Z739	585 aa	Known RBP	14.7	□□□□□ -0.06
DDR1-256	ENST00000505066	C10orf107	Q8IVU9	208 aa		14.7	□□□□□ -0.06
DDR1-256	ENST00000505066	C4orf33	Q8N1A6	199 aa		14.7	□□□□□ -0.06
DDR1-256	ENST00000505066	STEAP2	Q8NFT2	490 aa		14.7	□□□□□ -0.06
DDR1-256	ENST00000505066	OR56A1	Q8NGH5	318 aa		14.7	□□□□□ -0.06
DDR1-256	ENST00000505066	CLHC1	Q8NHS4	586 aa		14.7	□□□□□ -0.06

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