RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 BCAP29Q9UHQ4 241 aa7.56□□□□□ -1.2
CDC42SE2-208ENST00000505065 TEKT2Q9UIF3 430 aa7.56□□□□□ -1.2
CDC42SE2-208ENST00000505065 B3GNT3Q9Y2A9 372 aa7.56□□□□□ -1.2
CDC42SE2-208ENST00000505065 A0A087WZY1 265 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 ANKUB1A6NFN9 424 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 ZIC3O60481 467 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 PGM3O95394 542 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 LGI1O95970 557 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 EPS8Q12929 822 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 RNFT1Q5M7Z0 435 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 ZNF836Q6ZNA1 936 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 ZNF621Q6ZSS3 439 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 SLC39A3Q9BRY0 314 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 FANCFQ9NPI8 374 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 ZNF443Q9Y2A4 671 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 SLC35A3Q9Y2D2 325 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 KLF13Q9Y2Y9 288 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 IFT52Q9Y366 437 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 TRAV17A0A0B4J275 112 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 WWP2O00308 870 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 SUV39H1O43463 412 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 NME6O75414 186 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 ALPPP05187 535 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 GSNP06396 782 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 DBIP07108 87 aaKnown RBP7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 TNNI3P19429 210 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 ADH6P28332 368 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 MTPNP58546 118 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 CHRNEQ04844 493 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 PLCXD2Q0VAA5 305 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 CAPRIN1Q14444 709 aaKnown RBP7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 ZNHIT3Q15649 155 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 PLEKHN1Q494U1 663 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 MTX3Q5HYI7 312 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 POC1BQ8TC44 478 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 ASB15Q8WXK1 588 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 TM9SF4Q92544 642 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 ZG16BQ96DA0 208 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 ADGRG7Q96K78 797 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 EXD2Q9NVH0 621 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 PCDHGB4Q9UN71 923 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 USP22Q9UPT9 525 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 CPSF4O95639 269 aaKnown RBP7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 ITGA3P26006 1051 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 GUSBP1Q15486 140 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 SOWAHCQ53LP3 525 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 ABHD17BQ5VST6 288 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 WDR53Q7Z5U6 358 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 TMCO6Q96DC7 493 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 ASB9Q96DX5 294 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 C7orf34Q96L11 122 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 KLHDC3Q9BQ90 382 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 CADM1Q9BY67 442 aaKnown RBP7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 DCAF13Q9NV06 445 aaKnown RBP7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 BOD1L1Q8NFC6 3051 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 PKD1L2Q7Z442 2459 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 TCRBV3S1A0A5B6 114 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 SERINC4A6NH21 518 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 TPST2O60704 377 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 HCN1O60741 890 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 NPIPB7O75200 414 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 ELAVL4P26378 380 aaKnown RBP7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 CCL11P51671 97 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 KCNJ10P78508 379 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 KLRB1Q12918 225 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 BNIP2Q12982 314 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 PLPPR5Q32ZL2 321 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 LIN52Q52LA3 116 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 ZNF766Q5HY98 468 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 SLC22A10Q63ZE4 541 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 FAM156AQ8NDB6 213 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 CATSPER1Q8NEC5 780 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 OR6S1Q8NH40 331 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 GPR119Q8TDV5 335 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 THAP3Q8WTV1 239 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 MIB2Q96AX9 1013 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 C1GALT1C1Q96EU7 318 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 OSBPL11Q9BXB4 747 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 ALG2Q9H553 416 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 TIMMDC1Q9NPL8 285 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 LRFN1Q9P244 771 aa7.55□□□□□ -1.2
CDC42SE2-208ENST00000505065 GSC2O15499 205 aa7.54□□□□□ -1.2
CDC42SE2-208ENST00000505065 SUSD5O60279 629 aa7.54□□□□□ -1.2
CDC42SE2-208ENST00000505065 CRISP3P54108 245 aa7.54□□□□□ -1.2
CDC42SE2-208ENST00000505065 CDK6Q00534 326 aa7.54□□□□□ -1.2
CDC42SE2-208ENST00000505065 ZNF117Q03924 483 aa7.54□□□□□ -1.2
CDC42SE2-208ENST00000505065 LIPEQ05469 1076 aa7.54□□□□□ -1.2
CDC42SE2-208ENST00000505065 SCARB2Q14108 478 aa7.54□□□□□ -1.2
CDC42SE2-208ENST00000505065 BCL2A1Q16548 175 aa7.54□□□□□ -1.2
CDC42SE2-208ENST00000505065 NHLRC1Q6VVB1 395 aa7.54□□□□□ -1.2
CDC42SE2-208ENST00000505065 EID3Q8N140 333 aa7.54□□□□□ -1.2
CDC42SE2-208ENST00000505065 CDC26Q8NHZ8 85 aa7.54□□□□□ -1.2
CDC42SE2-208ENST00000505065 ADAMTS15Q8TE58 950 aa7.54□□□□□ -1.2
CDC42SE2-208ENST00000505065 DOK4Q8TEW6 326 aa7.54□□□□□ -1.2
CDC42SE2-208ENST00000505065 PRDM14Q9GZV8 571 aa7.54□□□□□ -1.2
CDC42SE2-208ENST00000505065 MAGIXQ9H6Y5 334 aa7.54□□□□□ -1.2
CDC42SE2-208ENST00000505065 ACTR3BQ9P1U1 418 aa7.54□□□□□ -1.2
CDC42SE2-208ENST00000505065 GMPR2Q9P2T1 348 aaKnown RBP7.54□□□□□ -1.2
CDC42SE2-208ENST00000505065 OIP5O43482 229 aa7.54□□□□□ -1.2
CDC42SE2-208ENST00000505065 SLC25A12O75746 678 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms