RNA–Protein interactions for RNA: ENST00000504786.5

GYPA-204, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-204ENST00000504786 NXF5Q9H1B4 397 aaKnown RBP3.56□□□□□ -1.84
GYPA-204ENST00000504786 VPS37BQ9H9H4 285 aa3.56□□□□□ -1.84
GYPA-204ENST00000504786 FN3KRPQ9HA64 309 aa3.56□□□□□ -1.84
GYPA-204ENST00000504786 TM9SF3Q9HD45 589 aa3.56□□□□□ -1.84
GYPA-204ENST00000504786 ZNF446Q9NWS9 450 aa3.56□□□□□ -1.84
GYPA-204ENST00000504786 AIPL1Q9NZN9 384 aa3.56□□□□□ -1.84
GYPA-204ENST00000504786 MLXQ9UH92 298 aa3.56□□□□□ -1.84
GYPA-204ENST00000504786 SPATA2Q9UM82 520 aa3.56□□□□□ -1.84
GYPA-204ENST00000504786 GMPPBQ9Y5P6 360 aa3.56□□□□□ -1.84
GYPA-204ENST00000504786 TRAV26-1A0A087WT03 109 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 A8MXK9 166 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 LCMT2O60294 686 aaKnown RBP3.55□□□□□ -1.84
GYPA-204ENST00000504786 LRATO95237 230 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 F10P00742 488 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 HCKP08631 526 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 HBQ1P09105 142 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 TOP1P11387 765 aaKnown RBP3.55□□□□□ -1.84
GYPA-204ENST00000504786 NCF2P19878 526 aaPredicted RBP3.55□□□□□ -1.84
GYPA-204ENST00000504786 PGCP20142 388 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 LMO2P25791 158 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 ATP5IP56385 69 aaPredicted RBP3.55□□□□□ -1.84
GYPA-204ENST00000504786 BEX3Q00994 111 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 ACY1Q03154 408 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 PEX6Q13608 980 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 CUL2Q13617 745 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 ELAVL3Q14576 367 aaKnown RBP3.55□□□□□ -1.84
GYPA-204ENST00000504786 GANABQ14697 944 aaKnown RBP3.55□□□□□ -1.84
GYPA-204ENST00000504786 OR8G2PQ6IF36 304 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 ARMCX5Q6P1M9 558 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 DOK6Q6PKX4 331 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 NANOGNBQ7Z5D8 188 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 ERICH1Q86X53 443 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 KRTAP7-1Q8IUC3 87 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 SLC22A9Q8IVM8 553 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 CRYGNQ8WXF5 182 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 NTNG2Q96CW9 530 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 PELI1Q96FA3 418 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 TPD52L3Q96J77 140 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 C7orf34Q96L11 122 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 C12orf66Q96MD2 445 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 RPRD1AQ96P16 312 aaPredicted RBP3.55□□□□□ -1.84
GYPA-204ENST00000504786 ATF6BQ99941 703 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 CHCHD5Q9BSY4 110 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 DUSP16Q9BY84 665 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 RCOR3Q9P2K3 495 aaPredicted RBP3.55□□□□□ -1.84
GYPA-204ENST00000504786 PCSK1NQ9UHG2 260 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 CDH9Q9ULB4 789 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 ALG6Q9Y672 507 aa3.55□□□□□ -1.84
GYPA-204ENST00000504786 ARHGEF35A5YM69 484 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 OR6C65A6NJZ3 312 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 FOXI3A8MTJ6 420 aaPredicted RBP3.54□□□□□ -1.84
GYPA-204ENST00000504786 OR7A17O14581 309 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 TRIM3O75382 744 aaPredicted RBP3.54□□□□□ -1.84
GYPA-204ENST00000504786 CIB2O75838 187 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 SNRPCP09234 159 aaKnown RBP3.54□□□□□ -1.84
GYPA-204ENST00000504786 PNMTP11086 282 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 AP3M2P53677 418 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 OTUD4Q01804 1114 aaKnown RBP3.54□□□□□ -1.84
GYPA-204ENST00000504786 CSTF1Q05048 431 aaKnown RBP3.54□□□□□ -1.84
GYPA-204ENST00000504786 MXD4Q14582 209 aaPredicted RBP3.54□□□□□ -1.84
GYPA-204ENST00000504786 CCL14Q16627 93 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 PCK2Q16822 640 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 KRT71Q3SY84 523 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 TMEM52BQ4KMG9 183 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 EMBQ6PCB8 327 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 APTXQ7Z2E3 356 aaKnown RBP3.54□□□□□ -1.84
GYPA-204ENST00000504786 MOB3BQ86TA1 216 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 MYPOPQ86VE0 399 aaPredicted RBP3.54□□□□□ -1.84
GYPA-204ENST00000504786 IFNEQ86WN2 208 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 LRRC75A-AS1Q8N1F1 130 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 BPIFB2Q8N4F0 458 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 PRSS33Q8NF86 280 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 OR4D5Q8NGN0 318 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 ZNF671Q8TAW3 534 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 FNDC8Q8TC99 324 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 MIPOL1Q8TD10 442 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 GTF3AQ92664 365 aaKnown RBP3.54□□□□□ -1.84
GYPA-204ENST00000504786 NT5C3BQ969T7 300 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 COQ2Q96H96 371 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 CCNL2Q96S94 520 aaPredicted RBP3.54□□□□□ -1.84
GYPA-204ENST00000504786 PLIN2Q99541 437 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 SLC6A7Q99884 636 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 OPRPNQ99935 248 aaPredicted RBP3.54□□□□□ -1.84
GYPA-204ENST00000504786 CCDC77Q9BR77 488 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 SLC39A3Q9BRY0 314 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 CCDC28BQ9BUN5 200 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 METTL7AQ9H8H3 244 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 JPT2Q9H910 190 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 MEPEQ9NQ76 525 aaPredicted RBP3.54□□□□□ -1.84
GYPA-204ENST00000504786 SLC17A5Q9NRA2 495 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 ELOVL2Q9NXB9 296 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 RABL2AQ9UBK7 228 aaPredicted RBP3.54□□□□□ -1.84
GYPA-204ENST00000504786 SEC14L3Q9UDX4 400 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 MUTYHQ9UIF7 546 aa3.54□□□□□ -1.84
GYPA-204ENST00000504786 FER1L5A0AVI2 2057 aa3.53□□□□□ -1.84
GYPA-204ENST00000504786 IGHV3OR16-12A0A075B7B8 117 aa3.53□□□□□ -1.84
GYPA-204ENST00000504786 A0A1B0GTH9 108 aa3.53□□□□□ -1.84
GYPA-204ENST00000504786 A0A1W2PNV4 684 aa3.53□□□□□ -1.84
GYPA-204ENST00000504786 HELTA6NFD8 242 aa3.53□□□□□ -1.84
GYPA-204ENST00000504786 NPIPA7E9PJI5 369 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms