RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 FNDC11Q9BVV2 318 aa9.37□□□□□ -0.91
DDX41-203ENST00000504781 ITPAQ9BY32 194 aa9.37□□□□□ -0.91
DDX41-203ENST00000504781 ZNF700Q9H0M5 742 aa9.37□□□□□ -0.91
DDX41-203ENST00000504781 FBXO34Q9NWN3 711 aa9.37□□□□□ -0.91
DDX41-203ENST00000504781 PDP1Q9P0J1 537 aaPredicted RBP9.37□□□□□ -0.91
DDX41-203ENST00000504781 PISDQ9UG56 409 aa9.37□□□□□ -0.91
DDX41-203ENST00000504781 A4GNTQ9UNA3 340 aa9.37□□□□□ -0.91
DDX41-203ENST00000504781 FARSAQ9Y285 508 aaKnown RBP9.37□□□□□ -0.91
DDX41-203ENST00000504781 DTX4Q9Y2E6 619 aa9.37□□□□□ -0.91
DDX41-203ENST00000504781 RAXQ9Y2V3 346 aa9.37□□□□□ -0.91
DDX41-203ENST00000504781 CHST2Q9Y4C5 530 aa9.37□□□□□ -0.91
DDX41-203ENST00000504781 ORC6Q9Y5N6 252 aa9.37□□□□□ -0.91
DDX41-203ENST00000504781 LYVE1Q9Y5Y7 322 aa9.37□□□□□ -0.91
DDX41-203ENST00000504781 U3KQV3 271 aa9.37□□□□□ -0.91
DDX41-203ENST00000504781 WDFY3Q8IZQ1 3526 aa9.37□□□□□ -0.91
DDX41-203ENST00000504781 CHD6Q8TD26 2715 aa9.37□□□□□ -0.91
DDX41-203ENST00000504781 A0A1W2PQ72 361 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 C9orf172C9J069 976 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 FFAR1O14842 300 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 TSPAN2O60636 221 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 UGT2B11O75310 529 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 CYP7B1O75881 506 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 ZFAND5O76080 213 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 IGKV1D-16P01601 117 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 H1F0P07305 194 aaKnown RBP9.36□□□□□ -0.91
DDX41-203ENST00000504781 NGFRP08138 427 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 ATXN8OSP0DMR3 200 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 CDH2P19022 906 aaPredicted RBP9.36□□□□□ -0.91
DDX41-203ENST00000504781 TCN2P20062 427 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 TBXA2RP21731 343 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 MMP11P24347 488 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 CD82P27701 267 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 KRT20P35900 424 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 NR0B1P51843 470 aaKnown RBP9.36□□□□□ -0.91
DDX41-203ENST00000504781 IST1P53990 364 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 NRG3P56975 720 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 SPIBQ01892 262 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 EBPQ15125 230 aaKnown RBP9.36□□□□□ -0.91
DDX41-203ENST00000504781 EXT1Q16394 746 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 MAPK14Q16539 360 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 SLC36A3Q495N2 470 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 DCST1Q5T197 706 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 KDM4DQ6B0I6 523 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 FAHD1Q6P587 224 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 PAPD4Q6PIY7 484 aaKnown RBP9.36□□□□□ -0.91
DDX41-203ENST00000504781 FAM198BQ6UWH4 519 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 SHISA6Q6ZSJ9 500 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 LANCL3Q6ZV70 420 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 ZNF550Q7Z398 422 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 MARVELD2Q8N4S9 558 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 ZNF321PQ8N8H1 164 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 ZNF441Q8N8Z8 693 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 OR4D11Q8NGI4 311 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 OR6T1Q8NGN1 323 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 OR4C3Q8NH37 302 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 M1APQ8TC57 530 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 PHF10Q8WUB8 498 aaKnown RBP9.36□□□□□ -0.91
DDX41-203ENST00000504781 PRRC1Q96M27 445 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 WDR77Q9BQA1 342 aaPredicted RBP9.36□□□□□ -0.91
DDX41-203ENST00000504781 WWTR1Q9GZV5 400 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 QRSL1Q9H0R6 528 aaKnown RBP9.36□□□□□ -0.91
DDX41-203ENST00000504781 NXF5Q9H1B4 397 aaKnown RBP9.36□□□□□ -0.91
DDX41-203ENST00000504781 SMURF2Q9HAU4 748 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 ENOPH1Q9UHY7 261 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 KCNE5Q9UJ90 142 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 SLC35A3Q9Y2D2 325 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 PTRH2Q9Y3E5 179 aaKnown RBP9.36□□□□□ -0.91
DDX41-203ENST00000504781 TESMINQ9Y4I5 508 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 AP4B1Q9Y6B7 739 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 SPEGQ15772 3267 aa9.36□□□□□ -0.91
DDX41-203ENST00000504781 A0A1W2PQD3 144 aa9.35□□□□□ -0.91
DDX41-203ENST00000504781 C21orf140B9A014 251 aa9.35□□□□□ -0.91
DDX41-203ENST00000504781 J3KTA2 159 aa9.35□□□□□ -0.91
DDX41-203ENST00000504781 FAAHO00519 579 aa9.35□□□□□ -0.91
DDX41-203ENST00000504781 SLC16A6O15403 523 aa9.35□□□□□ -0.91
DDX41-203ENST00000504781 HS6ST1O60243 411 aa9.35□□□□□ -0.91
DDX41-203ENST00000504781 REM1O75628 298 aa9.35□□□□□ -0.91
DDX41-203ENST00000504781 CCNB2O95067 398 aa9.35□□□□□ -0.91
DDX41-203ENST00000504781 OR5F1O95221 314 aa9.35□□□□□ -0.91
DDX41-203ENST00000504781 UMODP07911 640 aa9.35□□□□□ -0.91
DDX41-203ENST00000504781 HPGDP15428 266 aa9.35□□□□□ -0.91
DDX41-203ENST00000504781 CAPGP40121 348 aa9.35□□□□□ -0.91
DDX41-203ENST00000504781 FOLR3P41439 243 aa9.35□□□□□ -0.91
DDX41-203ENST00000504781 YAP1P46937 504 aaKnown RBP9.35□□□□□ -0.91
DDX41-203ENST00000504781 DAPP51397 102 aa9.35□□□□□ -0.91
DDX41-203ENST00000504781 CDH12P55289 794 aa9.35□□□□□ -0.91
DDX41-203ENST00000504781 SLC26A5P58743 744 aa9.35□□□□□ -0.91
DDX41-203ENST00000504781 ADARB1P78563 741 aaKnown RBP9.35□□□□□ -0.91
DDX41-203ENST00000504781 COX10Q12887 443 aa9.35□□□□□ -0.91
DDX41-203ENST00000504781 TARDBPQ13148 414 aaKnown RBP eCLIP9.35□□□□□ -0.91
DDX41-203ENST00000504781 FGFBP1Q14512 234 aa9.35□□□□□ -0.91
DDX41-203ENST00000504781 TRAM2Q15035 370 aa9.35□□□□□ -0.91
DDX41-203ENST00000504781 COL28A1Q2UY09 1125 aa9.35□□□□□ -0.91
DDX41-203ENST00000504781 ZNF836Q6ZNA1 936 aa9.35□□□□□ -0.91
DDX41-203ENST00000504781 NDUFAF7Q7L592 441 aa9.35□□□□□ -0.91
DDX41-203ENST00000504781 OLIG3Q7RTU3 272 aa9.35□□□□□ -0.91
DDX41-203ENST00000504781 TIPARPQ7Z3E1 657 aaKnown RBP9.35□□□□□ -0.91
DDX41-203ENST00000504781 RANBP3LQ86VV4 465 aaPredicted RBP9.35□□□□□ -0.91
DDX41-203ENST00000504781 RBM45Q8IUH3 476 aaKnown RBP9.35□□□□□ -0.91
DDX41-203ENST00000504781 C9orf40Q8IXQ3 194 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms