RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 SLC6A8P48029 635 aa20.38■□□□□ 0.85
CDC42SE2-207ENST00000504701 CLK3P49761 638 aaKnown RBP20.38■□□□□ 0.85
CDC42SE2-207ENST00000504701 C17orf67Q0P5P2 114 aa20.38■□□□□ 0.85
CDC42SE2-207ENST00000504701 LASP1Q14847 261 aaKnown RBP20.38■□□□□ 0.85
CDC42SE2-207ENST00000504701 CD226Q15762 336 aa20.38■□□□□ 0.85
CDC42SE2-207ENST00000504701 PAMR1Q6UXH9 720 aa20.38■□□□□ 0.85
CDC42SE2-207ENST00000504701 CHMP1BQ7LBR1 199 aa20.38■□□□□ 0.85
CDC42SE2-207ENST00000504701 OR6Y1Q8NGX8 325 aa20.38■□□□□ 0.85
CDC42SE2-207ENST00000504701 CDS1Q92903 461 aa20.38■□□□□ 0.85
CDC42SE2-207ENST00000504701 DTNBP1Q96EV8 351 aa20.38■□□□□ 0.85
CDC42SE2-207ENST00000504701 PIGQQ9BRB3 760 aa20.38■□□□□ 0.85
CDC42SE2-207ENST00000504701 CXorf36Q9H7Y0 433 aa20.38■□□□□ 0.85
CDC42SE2-207ENST00000504701 ZCCHC3Q9NUD5 404 aaKnown RBP20.38■□□□□ 0.85
CDC42SE2-207ENST00000504701 KCNE3Q9Y6H6 103 aa20.38■□□□□ 0.85
CDC42SE2-207ENST00000504701 MAP1AP78559 2803 aaPredicted RBP20.37■□□□□ 0.85
CDC42SE2-207ENST00000504701 OIP5O43482 229 aa20.37■□□□□ 0.85
CDC42SE2-207ENST00000504701 NDUFB5O43674 189 aa20.37■□□□□ 0.85
CDC42SE2-207ENST00000504701 ITM2AO43736 263 aa20.37■□□□□ 0.85
CDC42SE2-207ENST00000504701 TYROBPO43914 113 aa20.37■□□□□ 0.85
CDC42SE2-207ENST00000504701 HMGN2P05204 90 aaKnown RBP20.37■□□□□ 0.85
CDC42SE2-207ENST00000504701 BPGMP07738 259 aa20.37■□□□□ 0.85
CDC42SE2-207ENST00000504701 ALOX5P09917 674 aa20.37■□□□□ 0.85
CDC42SE2-207ENST00000504701 ETV4P43268 484 aa20.37■□□□□ 0.85
CDC42SE2-207ENST00000504701 ASMTP46597 345 aa20.37■□□□□ 0.85
CDC42SE2-207ENST00000504701 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.37■□□□□ 0.85
CDC42SE2-207ENST00000504701 C6orf136Q5SQH8 315 aa20.37■□□□□ 0.85
CDC42SE2-207ENST00000504701 COX18Q8N8Q8 333 aa20.37■□□□□ 0.85
CDC42SE2-207ENST00000504701 PGM2Q96G03 612 aa20.37■□□□□ 0.85
CDC42SE2-207ENST00000504701 PPP3R2Q96LZ3 170 aa20.37■□□□□ 0.85
CDC42SE2-207ENST00000504701 ACBD3Q9H3P7 528 aa20.37■□□□□ 0.85
CDC42SE2-207ENST00000504701 EML4Q9HC35 981 aaKnown RBP20.37■□□□□ 0.85
CDC42SE2-207ENST00000504701 GIN1Q9NXP7 522 aa20.37■□□□□ 0.85
CDC42SE2-207ENST00000504701 SNX8Q9Y5X2 465 aa20.37■□□□□ 0.85
CDC42SE2-207ENST00000504701 ZFHX3Q15911 3703 aa20.37■□□□□ 0.85
CDC42SE2-207ENST00000504701 C2CD3Q4AC94 2353 aa20.37■□□□□ 0.85
CDC42SE2-207ENST00000504701 A0A1W2PRB8 838 aa20.36■□□□□ 0.85
CDC42SE2-207ENST00000504701 TTC36A6NLP5 189 aa20.36■□□□□ 0.85
CDC42SE2-207ENST00000504701 TNFRSF21O75509 655 aa20.36■□□□□ 0.85
CDC42SE2-207ENST00000504701 ATE1O95260 518 aa20.36■□□□□ 0.85
CDC42SE2-207ENST00000504701 C6orf47O95873 294 aa20.36■□□□□ 0.85
CDC42SE2-207ENST00000504701 CGAP01215 116 aa20.36■□□□□ 0.85
CDC42SE2-207ENST00000504701 IL11P20809 199 aa20.36■□□□□ 0.85
CDC42SE2-207ENST00000504701 TBXA2RP21731 343 aa20.36■□□□□ 0.85
CDC42SE2-207ENST00000504701 DNASE1P24855 282 aa20.36■□□□□ 0.85
CDC42SE2-207ENST00000504701 HPCAL1P37235 193 aa20.36■□□□□ 0.85
CDC42SE2-207ENST00000504701 VPS26BQ4G0F5 336 aa20.36■□□□□ 0.85
CDC42SE2-207ENST00000504701 IL23RQ5VWK5 629 aa20.36■□□□□ 0.85
CDC42SE2-207ENST00000504701 PPP4R4Q6NUP7 873 aa20.36■□□□□ 0.85
CDC42SE2-207ENST00000504701 METTL25Q8N6Q8 603 aa20.36■□□□□ 0.85
CDC42SE2-207ENST00000504701 POC1BQ8TC44 478 aa20.36■□□□□ 0.85
CDC42SE2-207ENST00000504701 MTERF3Q96E29 417 aa20.36■□□□□ 0.85
CDC42SE2-207ENST00000504701 CHMP6Q96FZ7 201 aa20.36■□□□□ 0.85
CDC42SE2-207ENST00000504701 PPP1R36Q96LQ0 422 aa20.36■□□□□ 0.85
CDC42SE2-207ENST00000504701 TMUB1Q9BVT8 246 aa20.36■□□□□ 0.85
CDC42SE2-207ENST00000504701 TMEM185BQ9H7F4 350 aa20.36■□□□□ 0.85
CDC42SE2-207ENST00000504701 RNF122Q9H9V4 155 aa20.36■□□□□ 0.85
CDC42SE2-207ENST00000504701 KLHL28Q9NXS3 571 aa20.36■□□□□ 0.85
CDC42SE2-207ENST00000504701 C6orf203Q9P0P8 240 aaPredicted RBP20.36■□□□□ 0.85
CDC42SE2-207ENST00000504701 CLEC4AQ9UMR7 237 aa20.36■□□□□ 0.85
CDC42SE2-207ENST00000504701 TESMINQ9Y4I5 508 aa20.36■□□□□ 0.85
CDC42SE2-207ENST00000504701 WDR91A4D1P6 747 aa20.35■□□□□ 0.85
CDC42SE2-207ENST00000504701 EIF1AYO14602 144 aaKnown RBP20.35■□□□□ 0.85
CDC42SE2-207ENST00000504701 MSTNO14793 375 aa20.35■□□□□ 0.85
CDC42SE2-207ENST00000504701 DIO3P55073 304 aa20.35■□□□□ 0.85
CDC42SE2-207ENST00000504701 RIPPLY3P57055 190 aa20.35■□□□□ 0.85
CDC42SE2-207ENST00000504701 GUSBP1Q15486 140 aa20.35■□□□□ 0.85
CDC42SE2-207ENST00000504701 CTU2Q2VPK5 515 aaKnown RBP20.35■□□□□ 0.85
CDC42SE2-207ENST00000504701 ATP6AP1LQ52LC2 224 aa20.35■□□□□ 0.85
CDC42SE2-207ENST00000504701 C22orf34Q6ZV56 151 aa20.35■□□□□ 0.85
CDC42SE2-207ENST00000504701 ZNF550Q7Z398 422 aa20.35■□□□□ 0.85
CDC42SE2-207ENST00000504701 R3HCC1LQ7Z5L2 792 aaKnown RBP20.35■□□□□ 0.85
CDC42SE2-207ENST00000504701 FNDC5Q8NAU1 212 aa20.35■□□□□ 0.85
CDC42SE2-207ENST00000504701 OR5AK3PQ8NH89 298 aa20.35■□□□□ 0.85
CDC42SE2-207ENST00000504701 CAVIN3Q969G5 261 aa20.35■□□□□ 0.85
CDC42SE2-207ENST00000504701 RNF145Q96MT1 663 aa20.35■□□□□ 0.85
CDC42SE2-207ENST00000504701 DACH2Q96NX9 599 aa20.35■□□□□ 0.85
CDC42SE2-207ENST00000504701 WFIKKN1Q96NZ8 548 aa20.35■□□□□ 0.85
CDC42SE2-207ENST00000504701 ROPN1BQ9BZX4 212 aaPredicted RBP20.35■□□□□ 0.85
CDC42SE2-207ENST00000504701 ROPN1Q9HAT0 212 aaPredicted RBP20.35■□□□□ 0.85
CDC42SE2-207ENST00000504701 MED17Q9NVC6 651 aa20.35■□□□□ 0.85
CDC42SE2-207ENST00000504701 AP4B1Q9Y6B7 739 aa20.35■□□□□ 0.85
CDC42SE2-207ENST00000504701 TMEM114B3SHH9 223 aa20.34■□□□□ 0.85
CDC42SE2-207ENST00000504701 PSMA4P25789 261 aaKnown RBP20.34■□□□□ 0.85
CDC42SE2-207ENST00000504701 SHC1P29353 583 aa20.34■□□□□ 0.85
CDC42SE2-207ENST00000504701 EIF1AXP47813 144 aaKnown RBP20.34■□□□□ 0.85
CDC42SE2-207ENST00000504701 PRIM2P49643 509 aa20.34■□□□□ 0.85
CDC42SE2-207ENST00000504701 POU6F2P78424 691 aaPredicted RBP20.34■□□□□ 0.85
CDC42SE2-207ENST00000504701 TP53BP2Q13625 1128 aa20.34■□□□□ 0.85
CDC42SE2-207ENST00000504701 MLC1Q15049 377 aa20.34■□□□□ 0.85
CDC42SE2-207ENST00000504701 PLPPR5Q32ZL2 321 aa20.34■□□□□ 0.85
CDC42SE2-207ENST00000504701 NDUFAF6Q330K2 333 aa20.34■□□□□ 0.85
CDC42SE2-207ENST00000504701 GLYR1Q49A26 553 aaPredicted RBP20.34■□□□□ 0.85
CDC42SE2-207ENST00000504701 OR2A2Q6IF42 318 aa20.34■□□□□ 0.85
CDC42SE2-207ENST00000504701 TGIF2LYQ8IUE0 185 aa20.34■□□□□ 0.85
CDC42SE2-207ENST00000504701 CLEC4FQ8N1N0 589 aa20.34■□□□□ 0.85
CDC42SE2-207ENST00000504701 ZNF610Q8N9Z0 462 aa20.34■□□□□ 0.85
CDC42SE2-207ENST00000504701 ZNF524Q96C55 264 aa20.34■□□□□ 0.85
CDC42SE2-207ENST00000504701 ADGRG7Q96K78 797 aa20.34■□□□□ 0.85
CDC42SE2-207ENST00000504701 C20orf27Q9GZN8 174 aa20.34■□□□□ 0.85
CDC42SE2-207ENST00000504701 GPATCH2Q9NW75 528 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms