RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 AENQ8WTP8 325 aaKnown RBP10.79□□□□□ -0.68
MED28-203ENST00000503945 HOXB13Q92826 284 aaPredicted RBP10.79□□□□□ -0.68
MED28-203ENST00000503945 PGM2Q96G03 612 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 MS4A4EQ96PG1 132 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 SLC39A3Q9BRY0 314 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 TMEM109Q9BVC6 243 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 HOXD1Q9GZZ0 328 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 ZDHHC2Q9UIJ5 367 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 PACSIN3Q9UKS6 424 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 EIF3LQ9Y262 564 aaKnown RBP10.79□□□□□ -0.68
MED28-203ENST00000503945 PLEKHA6Q9Y2H5 1048 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 VPS13CQ709C8 3753 aa10.79□□□□□ -0.68
MED28-203ENST00000503945 HRNRQ86YZ3 2850 aaPredicted RBP10.79□□□□□ -0.68
MED28-203ENST00000503945 KIAA1549Q9HCM3 1950 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 A0A087WZY1 265 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 B4DXG7 233 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 ALG1L2C9J202 215 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 SCDO00767 359 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 MSTNO14793 375 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 CFLARO15519 480 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 SEC14L5O43304 696 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 HCRTR2O43614 444 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 SMNDC1O75940 238 aaKnown RBP eCLIP10.78□□□□□ -0.68
MED28-203ENST00000503945 GOSR1O95249 250 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 HMGN2P05204 90 aaKnown RBP10.78□□□□□ -0.68
MED28-203ENST00000503945 NGFRP08138 427 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 LAMP1P11279 417 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 CREB1P16220 341 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 CLDN15P56746 228 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 MAD2L1Q13257 205 aaPredicted RBP10.78□□□□□ -0.68
MED28-203ENST00000503945 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.78□□□□□ -0.68
MED28-203ENST00000503945 SPDYE7PQ495Y7 208 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 MFSD12Q6NUT3 480 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 GALNT10Q86SR1 603 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 MISPQ8IVT2 679 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 WDR75Q8IWA0 830 aaKnown RBP10.78□□□□□ -0.68
MED28-203ENST00000503945 COX18Q8N8Q8 333 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 ACTRT2Q8TDY3 377 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 OR5P2Q8WZ92 322 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 JADE3Q92613 823 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 CAVIN3Q969G5 261 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 TUBGCP3Q96CW5 907 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 COQ8BQ96D53 544 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 STARD4Q96DR4 205 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 GIMAP5Q96F15 307 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 C3orf30Q96M34 536 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 BTBD2Q9BX70 525 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 PINK1Q9BXM7 581 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 PRRG4Q9BZD6 226 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 DLL4Q9NR61 685 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 ZCCHC3Q9NUD5 404 aaKnown RBP10.78□□□□□ -0.68
MED28-203ENST00000503945 GIN1Q9NXP7 522 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 GALNT8Q9NY28 637 aa10.78□□□□□ -0.68
MED28-203ENST00000503945 FAF1Q9UNN5 650 aaPredicted RBP10.78□□□□□ -0.68
MED28-203ENST00000503945 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.77□□□□□ -0.69
MED28-203ENST00000503945 A0A1W2PNV4 684 aa10.77□□□□□ -0.69
MED28-203ENST00000503945 WDR91A4D1P6 747 aa10.77□□□□□ -0.69
MED28-203ENST00000503945 SCAMP2O15127 329 aaKnown RBP10.77□□□□□ -0.69
MED28-203ENST00000503945 RGS16O15492 202 aaPredicted RBP10.77□□□□□ -0.69
MED28-203ENST00000503945 TNFSF13O75888 250 aa10.77□□□□□ -0.69
MED28-203ENST00000503945 OXSR1O95747 527 aaPredicted RBP10.77□□□□□ -0.69
MED28-203ENST00000503945 ACP2P11117 423 aa10.77□□□□□ -0.69
MED28-203ENST00000503945 EFNA1P20827 205 aaPredicted RBP10.77□□□□□ -0.69
MED28-203ENST00000503945 ATP6V1C1P21283 382 aa10.77□□□□□ -0.69
MED28-203ENST00000503945 KCNJ5P48544 419 aa10.77□□□□□ -0.69
MED28-203ENST00000503945 ZNF41P51814 821 aaPredicted RBP10.77□□□□□ -0.69
MED28-203ENST00000503945 ADAM8P78325 824 aa10.77□□□□□ -0.69
MED28-203ENST00000503945 POU6F2P78424 691 aaPredicted RBP10.77□□□□□ -0.69
MED28-203ENST00000503945 FAM27E3Q08E93 113 aa10.77□□□□□ -0.69
MED28-203ENST00000503945 TP53BP2Q13625 1128 aa10.77□□□□□ -0.69
MED28-203ENST00000503945 FGFBP1Q14512 234 aa10.77□□□□□ -0.69
MED28-203ENST00000503945 PON3Q15166 354 aa10.77□□□□□ -0.69
MED28-203ENST00000503945 DUSP5Q16690 384 aa10.77□□□□□ -0.69
MED28-203ENST00000503945 BHLHB9Q6PI77 547 aa10.77□□□□□ -0.69
MED28-203ENST00000503945 CAMKMTQ7Z624 323 aa10.77□□□□□ -0.69
MED28-203ENST00000503945 ADAMTS15Q8TE58 950 aa10.77□□□□□ -0.69
MED28-203ENST00000503945 SMPDL3BQ92485 455 aa10.77□□□□□ -0.69
MED28-203ENST00000503945 FAM120BQ96EK7 910 aaKnown RBP10.77□□□□□ -0.69
MED28-203ENST00000503945 STACQ99469 402 aa10.77□□□□□ -0.69
MED28-203ENST00000503945 C1orf50Q9BV19 199 aa10.77□□□□□ -0.69
MED28-203ENST00000503945 ACTRT3Q9BYD9 372 aa10.77□□□□□ -0.69
MED28-203ENST00000503945 PARD6BQ9BYG5 372 aa10.77□□□□□ -0.69
MED28-203ENST00000503945 PIGUQ9H490 435 aa10.77□□□□□ -0.69
MED28-203ENST00000503945 DUSP22Q9NRW4 184 aa10.77□□□□□ -0.69
MED28-203ENST00000503945 PAQR5Q9NXK6 330 aaPredicted RBP10.77□□□□□ -0.69
MED28-203ENST00000503945 ELOVL5Q9NYP7 299 aa10.77□□□□□ -0.69
MED28-203ENST00000503945 VDAC3Q9Y277 283 aa10.77□□□□□ -0.69
MED28-203ENST00000503945 ZNF175Q9Y473 711 aa10.77□□□□□ -0.69
MED28-203ENST00000503945 UQCRHLA0A096LP55 91 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 SH3D21A4FU49 640 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 H0YC42 278 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 H3BNH8 94 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 BIRC5O15392 142 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 TYROBPO43914 113 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 KRT16P08779 473 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 CPOXP36551 454 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 KIR2DL2P43627 348 aaPredicted RBP10.76□□□□□ -0.69
MED28-203ENST00000503945 PCYT1AP49585 367 aa10.76□□□□□ -0.69
MED28-203ENST00000503945 TPD52P55327 224 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms