RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 FBXO7Q9Y3I1 522 aa5.06□□□□□ -1.6
NEDD4-203ENST00000502612 ATG4BQ9Y4P1 393 aa5.06□□□□□ -1.6
NEDD4-203ENST00000502612 SIPA1L1O43166 1804 aa5.06□□□□□ -1.6
NEDD4-203ENST00000502612 KIF13BQ9NQT8 1826 aa5.06□□□□□ -1.6
NEDD4-203ENST00000502612 NFASCO94856 1347 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 ZNF646O15015 1829 aaPredicted RBP5.05□□□□□ -1.6
NEDD4-203ENST00000502612 ARFGEF1Q9Y6D6 1849 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 NME2P1O60361 137 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 TGFAP01135 160 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 CGAP01215 116 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 MBL2P11226 248 aaPredicted RBP5.05□□□□□ -1.6
NEDD4-203ENST00000502612 ETS1P14921 441 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 CYP11B1P15538 503 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 GNSP15586 552 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 H2AFXP16104 143 aaPredicted RBP5.05□□□□□ -1.6
NEDD4-203ENST00000502612 PTPN4P29074 926 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 ALDH3B1P43353 468 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 SLC1A6P48664 564 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 POLR2FP61218 127 aaKnown RBP5.05□□□□□ -1.6
NEDD4-203ENST00000502612 SPP2Q13103 211 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 FASTKQ14296 549 aaKnown RBP5.05□□□□□ -1.6
NEDD4-203ENST00000502612 CLPPQ16740 277 aaPredicted RBP5.05□□□□□ -1.6
NEDD4-203ENST00000502612 SHROOM1Q2M3G4 852 aaPredicted RBP5.05□□□□□ -1.6
NEDD4-203ENST00000502612 ZNF528Q3MIS6 628 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 UNC50Q53HI1 259 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 LIPKQ5VXJ0 399 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 WDR25Q64LD2 544 aaPredicted RBP5.05□□□□□ -1.6
NEDD4-203ENST00000502612 FAAP20Q6NZ36 180 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 REG3GQ6UW15 175 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 CDHR3Q6ZTQ4 885 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 TAF8Q7Z7C8 310 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 LMNTD2Q8IXW0 634 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 ELMOD2Q8IZ81 293 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 SYCE1Q8N0S2 351 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 LINC00518Q8N0U6 118 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 ZNF781Q8N8C0 355 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 ICA1LQ8NDH6 482 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 TAF4BQ92750 862 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 TMEM186Q96B77 213 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 RAB3CQ96E17 227 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 DEFB118Q96PH6 123 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 ATOH8Q96SQ7 321 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 PXMP2Q9NR77 195 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 ZNF446Q9NWS9 450 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 TAS2R16Q9NYV7 291 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.05□□□□□ -1.6
NEDD4-203ENST00000502612 HYOU1Q9Y4L1 999 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 ADAMTSL1Q8N6G6 1762 aa5.05□□□□□ -1.6
NEDD4-203ENST00000502612 PCNX3Q9H6A9 2034 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 ASTN1O14525 1302 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 TEX48A0A1B0GUV7 120 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 ARHGAP42A6NI28 874 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 RPL37AP8A6NKH3 93 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 SHISA9B4DS77 424 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 CHEK1O14757 476 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 CRLF1O75462 422 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 MT-ATP6P00846 226 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 IGHG1P01857 330 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 FCER2P06734 321 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 HCKP08631 526 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 CCDC159P0C7I6 412 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 KRT5P13647 590 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 UCHL3P15374 230 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 FOSL2P15408 326 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 YWHABP31946 246 aaKnown RBP5.04□□□□□ -1.6
NEDD4-203ENST00000502612 GTF2H1P32780 548 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 RPS6P62753 249 aaKnown RBP5.04□□□□□ -1.6
NEDD4-203ENST00000502612 GABPB1Q06547 395 aaPredicted RBP5.04□□□□□ -1.6
NEDD4-203ENST00000502612 ZKSCAN8Q15776 578 aaPredicted RBP5.04□□□□□ -1.6
NEDD4-203ENST00000502612 CFAP221Q4G0U5 840 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 HSP90B2PQ58FF3 399 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 TCHHL1Q5QJ38 904 aaPredicted RBP5.04□□□□□ -1.6
NEDD4-203ENST00000502612 C1orf189Q5VU69 101 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 HIST2H2AA3Q6FI13 130 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 PPP1R2P3Q6NXS1 205 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 TIPARPQ7Z3E1 657 aaKnown RBP5.04□□□□□ -1.6
NEDD4-203ENST00000502612 LEMD2Q8NC56 503 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 OR4Q3Q8NH05 313 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.04□□□□□ -1.6
NEDD4-203ENST00000502612 TMEM45BQ96B21 275 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 DCPSQ96C86 337 aaKnown RBP5.04□□□□□ -1.6
NEDD4-203ENST00000502612 CAPNS2Q96L46 248 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 IFT74Q96LB3 600 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 NSMCE2Q96MF7 247 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 ANKRD27Q96NW4 1050 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 NLNQ9BYT8 704 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 HPS4Q9NQG7 708 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 AGPAT3Q9NRZ7 376 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 GCNT4Q9P109 453 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 ERVK-18Q9QC07 812 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 EIF3KQ9UBQ5 218 aaKnown RBP5.04□□□□□ -1.6
NEDD4-203ENST00000502612 IKZF3Q9UKT9 509 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 SNX12Q9UMY4 172 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 ENTPD4Q9Y227 616 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 KLF2Q9Y5W3 355 aaPredicted RBP5.04□□□□□ -1.6
NEDD4-203ENST00000502612 STYXL1Q9Y6J8 313 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 PRSS21Q9Y6M0 314 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 V9GYY5 206 aaPredicted RBP5.04□□□□□ -1.6
NEDD4-203ENST00000502612 SCN9AQ15858 1988 aa5.04□□□□□ -1.6
NEDD4-203ENST00000502612 A0A1W2PPR1 153 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms