RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	CLDN4	O14493	209 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SMAD7	O15105	426 aa	Known RBP	4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CLOCK	O15516	846 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	FLRT2	O43155	660 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	KLK10	O43240	276 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CHST10	O43529	356 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PCDHGA12	O60330	932 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TPST1	O60507	370 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CTNS	O60931	367 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PDE9A	O76083	593 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PRKD3	O94806	890 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SOX30	O94993	753 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	NSA2	O95478	260 aa	Known RBP	4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CPNE6	O95741	557 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ZNF682	O95780	498 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	GPR75	O95800	540 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	AGR2	O95994	175 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CST1	P01037	141 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	FH	P07954	510 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	IFI6	P09912	130 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	C8orf89	P0DMQ9	161 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	RNH1	P13489	461 aa	Known RBP	4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CPM	P14384	443 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CD1C	P29017	333 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PCGF2	P35227	344 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	FEN1	P39748	380 aa	Known RBP	4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PEX19	P40855	299 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	GABRA4	P48169	554 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	KHK	P50053	298 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CDK9	P50750	372 aa	Known RBP	4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ARHGDIA	P52565	204 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	MVD	P53602	400 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PRKAG1	P54619	331 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	GFER	P55789	205 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SELENOW	P63302	87 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	MYBPC3	Q14896	1274 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ATP6AP1	Q15904	470 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	LRRC36	Q1X8D7	754 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	DEFB110	Q30KQ9	67 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	INAVA	Q3KP66	663 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	LRRC23	Q53EV4	343 aa	Predicted RBP	4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	YOD1	Q5VVQ6	348 aa	Predicted RBP	4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	REEP3	Q6NUK4	255 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	FAM180B	Q6P0A1	224 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TMEM154	Q6P9G4	183 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	INO80C	Q6PI98	192 aa	Predicted RBP	4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	IZUMO2	Q6UXV1	221 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CEACAM20	Q6UY09	585 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ZBTB49	Q6ZSB9	765 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SZRD1	Q7Z422	152 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PRSS42	Q7Z5A4	293 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	AMIGO2	Q86SJ2	522 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ADGRE4P	Q86SQ3	457 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PDSS2	Q86YH6	399 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ZNF595	Q8IYB9	648 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CLEC4F	Q8N1N0	589 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	D2HGDH	Q8N465	521 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	EID2	Q8N6I1	236 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PACRGL	Q8N7B6	248 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	DRAXIN	Q8NBI3	349 aa	Predicted RBP	4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	OR9A4	Q8NGU2	314 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	OR5AK3P	Q8NH89	298 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	RASSF5	Q8WWW0	418 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CFHR4	Q92496	578 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TMEM131	Q92545	1883 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	UCN3	Q969E3	161 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SDCCAG3	Q96C92	435 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ELP4	Q96EB1	424 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	MVB12A	Q96EY5	273 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	C1orf159	Q96HA4	380 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	C10orf90	Q96M02	699 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ZNF681	Q96N22	645 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ZNF285	Q96NJ3	590 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	BTBD9	Q96Q07	612 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ZNF607	Q96SK3	696 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SPATA5L1	Q9BVQ7	753 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CHST8	Q9H2A9	424 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SEMA6A	Q9H2E6	1030 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TRIM45	Q9H8W5	580 aa	Predicted RBP	4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SYNPO2L	Q9H987	977 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SLAMF7	Q9NQ25	335 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	AGPAT4	Q9NRZ5	378 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SIRT3	Q9NTG7	399 aa	Predicted RBP	4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ZCCHC3	Q9NUD5	404 aa	Known RBP	4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	CALML5	Q9NZT1	146 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	PTGFRN	Q9P2B2	879 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	TRPC4	Q9UBN4	977 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	DNAJB9	Q9UBS3	223 aa		4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325	MN1	Q10571	1320 aa	Predicted RBP	4.93	□□□□□ -1.62
HMGXB4-208	ENST00000498325		A0A087WV62	115 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325		A0A0A6YYC8	382 aa	Predicted RBP	4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325		A0A0G2JPF8	293 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	KRTAP23-1	A1A580	65 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	SYNDIG1L	A6NDD5	238 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	ZNF860	A6NHJ4	632 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	WASHC1	A8K0Z3	465 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325		A8MU76	341 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	HNRNPCL2	B2RXH8	293 aa		4.92	□□□□□ -1.62
HMGXB4-208	ENST00000498325	HNRNPCL3	B7ZW38	293 aa		4.92	□□□□□ -1.62

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