RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 TMEM114B3SHH9 223 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 PLK4O00444 970 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 TIMM23O14925 209 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ZBTB39O15060 712 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 NVLO15381 856 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 KLK10O43240 276 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SYNGR2O43760 224 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ADAMTS4O75173 837 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 KLF7O75840 302 aaPredicted RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 TOX4O94842 621 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 KCNK2O95069 426 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SYNGR4O95473 234 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 IGHEP01854 428 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 RPN2P04844 631 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ALPLP05186 524 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 BPIP17213 487 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ORM2P19652 201 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 NR4A1P22736 598 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 DDX6P26196 483 aaKnown RBP eCLIP1.31□□□□□ -2.2
XRN1-214ENST00000498077 TACR3P29371 465 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 RCVRNP35243 200 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 GABRB2P47870 512 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 PGGT1BP53609 377 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SLC5A3P53794 718 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 CAV3P56539 151 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 HSD17B7P56937 341 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SLC35A2P78381 396 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 HTRA4P83105 476 aaPredicted RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 AMPD3Q01432 767 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 BST2Q10589 180 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 FADDQ13158 208 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SNTA1Q13424 505 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 HERPUD1Q15011 391 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 KARSQ15046 597 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 LRRC37A5PQ49AS3 106 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 FAM74A3Q4VXF1 159 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 CCNYL2Q5T2Q4 361 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 HENMT1Q5T8I9 393 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 BROXQ5VW32 411 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 NEPROQ6NW34 567 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 C4orf22Q6V702 233 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ETV3LQ6ZN32 361 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 GPBP1Q86WP2 473 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 HEATR4Q86WZ0 1026 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 GAS2L3Q86XJ1 694 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ECHDC2Q86YB7 292 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 KLBQ86Z14 1044 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 RIOX2Q8IUF8 465 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 Q8N1Y9 231 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 NAT8LQ8N9F0 302 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SCAIQ8N9R8 606 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 OR13C8Q8NGS7 320 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ENKURQ8TC29 256 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 PNISRQ8TF01 805 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 ERGIC1Q969X5 290 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 LRRC39Q96DD0 335 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 GIMAP5Q96F15 307 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 NRBF2Q96F24 287 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 CDCA5Q96FF9 252 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 LRIG1Q96JA1 1093 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 DEFB118Q96PH6 123 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 FCRL4Q96PJ5 515 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 GPR21Q99679 349 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 PRMT1Q99873 361 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 DUSP9Q99956 384 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 ALG12Q9BV10 488 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SLC2A11Q9BYW1 496 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ANKZF1Q9H8Y5 726 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 EMC7Q9NPA0 242 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 PXMP2Q9NR77 195 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 SLC39A9Q9NUM3 307 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ACOXLQ9NUZ1 547 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 GEMIN8Q9NWZ8 242 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 B3GAT1Q9P2W7 334 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 INTS6Q9UL03 887 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 NOTCH3Q9UM47 2321 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 KCNJ14Q9UNX9 436 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 UTP11Q9Y3A2 253 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 UGT2A1Q9Y4X1 527 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 PCDHGB5Q9Y5G0 923 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 NPTNQ9Y639 398 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 RIC1Q4ADV7 1423 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 IGHV5-51A0A0C4DH38 117 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 WDR27A2RRH5 827 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 LRRC30A6NM36 301 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 C2orf74A8MZ97 194 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 F5H5P2 479 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 ARPC2O15144 300 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 RRP8O43159 456 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 MBTPS2O43462 519 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 TGM5O43548 720 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 B4GALT3O60512 393 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 PHF2O75151 1096 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 TRIM3O75382 744 aaPredicted RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 GATBO75879 557 aaKnown RBP1.31□□□□□ -2.2
XRN1-214ENST00000498077 VENTXO95231 258 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 NPTXRO95502 500 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 APRTP07741 180 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 GALTP07902 379 aa1.31□□□□□ -2.2
XRN1-214ENST00000498077 IL7P13232 177 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms