RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 LRRC15Q8TF66 581 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 PDCD6IPQ8WUM4 868 aaKnown RBP5.38□□□□□ -1.55
BRCA1-224ENST00000497488 TANKQ92844 425 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 SCRN2Q96FV2 425 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 URB1-AS1Q96HZ7 61 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 KCNS3Q9BQ31 491 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 C19orf43Q9BQ61 176 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 TRIM62Q9BVG3 475 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 SHARPINQ9H0F6 387 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 APOBEC3GQ9HC16 384 aaKnown RBP5.38□□□□□ -1.55
BRCA1-224ENST00000497488 LYRM4Q9HD34 91 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 C11orf21Q9P2W6 132 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 POLKQ9UBT6 870 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 GHRLQ9UBU3 117 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 ST6GALNAC2Q9UJ37 374 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 BARX2Q9UMQ3 279 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-224ENST00000497488 TESMINQ9Y4I5 508 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 TTC21AQ8NDW8 1320 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 TAF1P21675 1872 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 ANKRD36BQ8N2N9 1353 aa5.38□□□□□ -1.55
BRCA1-224ENST00000497488 THSD7AQ9UPZ6 1657 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 TRBV11-1A0A0K0K1C0 115 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 IQCF5A8MTL0 148 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 P2RY10O00398 339 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 XPNPEP2O43895 674 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 KRT33AO76009 404 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 CLDN14O95500 239 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 GSTA1P08263 222 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 ITGA2P17301 1181 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 CD80P33681 288 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 SLC1A4P43007 532 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 AMTP48728 403 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 DNA2P51530 1060 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 CCNG1P51959 295 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 EFNB2P52799 333 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 OGDHQ02218 1023 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 PAX5Q02548 391 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 ZFP36L1Q07352 338 aaKnown RBP5.37□□□□□ -1.55
BRCA1-224ENST00000497488 LGALS3BPQ08380 585 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 ZNF155Q12901 538 aaPredicted RBP5.37□□□□□ -1.55
BRCA1-224ENST00000497488 STK38Q15208 465 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 BEX5Q5H9J7 111 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 DCAF10Q5QP82 559 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 OTUD3Q5T2D3 398 aaPredicted RBP5.37□□□□□ -1.55
BRCA1-224ENST00000497488 SLX4IPQ5VYV7 408 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 STEAP1BQ6NZ63 245 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 TMEM219Q86XT9 240 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 GPC2Q8N158 579 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 PYROXD2Q8N2H3 581 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 FGFRL1Q8N441 504 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 CCDC185Q8N715 623 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 Q8N9G6 341 aaPredicted RBP5.37□□□□□ -1.55
BRCA1-224ENST00000497488 CHDHQ8NE62 594 aaPredicted RBP5.37□□□□□ -1.55
BRCA1-224ENST00000497488 SDR9C7Q8NEX9 313 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 OR7G2Q8NG99 324 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 RHEBL1Q8TAI7 183 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 MARCH1Q8TCQ1 289 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 DTX3LQ8TDB6 740 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 HCAR2Q8TDS4 363 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 DDI1Q8WTU0 396 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 DPH7Q9BTV6 452 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 KLK15Q9H2R5 256 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 AZI2Q9H6S1 392 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 ALG9Q9H6U8 611 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 PLAC1Q9HBJ0 212 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 SLC25A19Q9HC21 320 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 NRBP2Q9NSY0 501 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 QPCTLQ9NXS2 382 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 PTTG3PQ9NZH4 202 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 KLRF1Q9NZS2 232 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 CD300AQ9UGN4 299 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 RASD1Q9Y272 281 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 WIPI2Q9Y4P8 454 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.37□□□□□ -1.55
BRCA1-224ENST00000497488 SH3TC1Q8TE82 1336 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 BRWD3Q6RI45 1802 aa5.37□□□□□ -1.55
BRCA1-224ENST00000497488 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.36□□□□□ -1.55
BRCA1-224ENST00000497488 NPIPA7E9PJI5 369 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 HIP1O00291 1037 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 DLGAP1O14490 977 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 BCKDKO14874 412 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 EIF3HO15372 352 aaKnown RBP eCLIP5.36□□□□□ -1.55
BRCA1-224ENST00000497488 KIAA0513O60268 411 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 SRPX2O60687 465 aaPredicted RBP5.36□□□□□ -1.55
BRCA1-224ENST00000497488 N4BP1O75113 896 aaKnown RBP5.36□□□□□ -1.55
BRCA1-224ENST00000497488 NIPSNAP2O75323 286 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 TOXO94900 526 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 CLDN9O95484 217 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 NPIPA8P0DM63 369 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 PRPS2P11908 318 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 MMP11P24347 488 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 PPP2R1BP30154 601 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 P2RY1P47900 373 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 GAS1P54826 345 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 EEF1A1P68104 462 aaKnown RBP5.36□□□□□ -1.55
BRCA1-224ENST00000497488 MYL7Q01449 175 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 SLC20A2Q08357 652 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 ZNF177Q13360 481 aaPredicted RBP5.36□□□□□ -1.55
BRCA1-224ENST00000497488 MTX1Q13505 466 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 HSP90AA4PQ58FG1 418 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms