RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 ANKRD46Q86W74 232 aa18.7■□□□□ 0.58
COL9A2-211ENST00000496215 MCEMP1Q8IX19 187 aa18.7■□□□□ 0.58
COL9A2-211ENST00000496215 GATSQ8NAP1 163 aa18.7■□□□□ 0.58
COL9A2-211ENST00000496215 OR4C3Q8NH37 302 aa18.7■□□□□ 0.58
COL9A2-211ENST00000496215 PIWIL2Q8TC59 973 aaKnown RBP18.7■□□□□ 0.58
COL9A2-211ENST00000496215 ZPLD1Q8TCW7 415 aa18.7■□□□□ 0.58
COL9A2-211ENST00000496215 C1GALT1C1Q96EU7 318 aa18.7■□□□□ 0.58
COL9A2-211ENST00000496215 TRIM8Q9BZR9 551 aa18.7■□□□□ 0.58
COL9A2-211ENST00000496215 FBXO34Q9NWN3 711 aa18.7■□□□□ 0.58
COL9A2-211ENST00000496215 MYO9AB2RTY4 2548 aa18.69■□□□□ 0.58
COL9A2-211ENST00000496215 GMFGO60234 142 aa18.69■□□□□ 0.58
COL9A2-211ENST00000496215 ZIC3O60481 467 aa18.69■□□□□ 0.58
COL9A2-211ENST00000496215 IL2RAP01589 272 aa18.69■□□□□ 0.58
COL9A2-211ENST00000496215 ZNF708P17019 499 aa18.69■□□□□ 0.58
COL9A2-211ENST00000496215 MSX1P28360 303 aa18.69■□□□□ 0.58
COL9A2-211ENST00000496215 S100A3P33764 101 aa18.69■□□□□ 0.58
COL9A2-211ENST00000496215 TIMP3P35625 211 aa18.69■□□□□ 0.58
COL9A2-211ENST00000496215 LHX2P50458 406 aa18.69■□□□□ 0.58
COL9A2-211ENST00000496215 B3GALT5-AS1P59052 145 aa18.69■□□□□ 0.58
COL9A2-211ENST00000496215 RPS26P62854 115 aaKnown RBP18.69■□□□□ 0.58
COL9A2-211ENST00000496215 NXNQ6DKJ4 435 aa18.69■□□□□ 0.58
COL9A2-211ENST00000496215 MEX3BQ6ZN04 569 aaKnown RBP18.69■□□□□ 0.58
COL9A2-211ENST00000496215 GDF7Q7Z4P5 450 aa18.69■□□□□ 0.58
COL9A2-211ENST00000496215 MISPQ8IVT2 679 aa18.69■□□□□ 0.58
COL9A2-211ENST00000496215 ZNF295-AS1Q8N0V1 137 aa18.69■□□□□ 0.58
COL9A2-211ENST00000496215 ZNF527Q8NB42 609 aa18.69■□□□□ 0.58
COL9A2-211ENST00000496215 TNIP2Q8NFZ5 429 aa18.69■□□□□ 0.58
COL9A2-211ENST00000496215 OR5D16Q8NGK9 328 aa18.69■□□□□ 0.58
COL9A2-211ENST00000496215 ZNF75CPQ92670 426 aaPredicted RBP18.69■□□□□ 0.58
COL9A2-211ENST00000496215 OR7D2Q96RA2 312 aa18.69■□□□□ 0.58
COL9A2-211ENST00000496215 SPOCK3Q9BQ16 436 aa18.69■□□□□ 0.58
COL9A2-211ENST00000496215 TUBA1CQ9BQE3 449 aa18.69■□□□□ 0.58
COL9A2-211ENST00000496215 VIPAS39Q9H9C1 493 aa18.69■□□□□ 0.58
COL9A2-211ENST00000496215 NPDC1Q9NQX5 325 aaPredicted RBP18.69■□□□□ 0.58
COL9A2-211ENST00000496215 PRSS51A0A1B0GVH4 220 aa18.68■□□□□ 0.58
COL9A2-211ENST00000496215 A0A1W2PQD3 144 aa18.68■□□□□ 0.58
COL9A2-211ENST00000496215 MBD3L4A6NDZ8 208 aaPredicted RBP18.68■□□□□ 0.58
COL9A2-211ENST00000496215 MBD3L3A6NE82 208 aaPredicted RBP18.68■□□□□ 0.58
COL9A2-211ENST00000496215 MBD3L5A6NJ08 208 aaPredicted RBP18.68■□□□□ 0.58
COL9A2-211ENST00000496215 DVL2O14641 736 aa18.68■□□□□ 0.58
COL9A2-211ENST00000496215 H2AFXP16104 143 aaPredicted RBP18.68■□□□□ 0.58
COL9A2-211ENST00000496215 POU3F2P20265 443 aaPredicted RBP18.68■□□□□ 0.58
COL9A2-211ENST00000496215 CEACAM8P31997 349 aaPredicted RBP18.68■□□□□ 0.58
COL9A2-211ENST00000496215 STARP49675 285 aa18.68■□□□□ 0.58
COL9A2-211ENST00000496215 CLDN18P56856 261 aa18.68■□□□□ 0.58
COL9A2-211ENST00000496215 UFM1P61960 85 aa18.68■□□□□ 0.58
COL9A2-211ENST00000496215 C6orf120Q7Z4R8 191 aa18.68■□□□□ 0.58
COL9A2-211ENST00000496215 LIX1LQ8IVB5 337 aa18.68■□□□□ 0.58
COL9A2-211ENST00000496215 CLEC4FQ8N1N0 589 aa18.68■□□□□ 0.58
COL9A2-211ENST00000496215 NAXEQ8NCW5 288 aa18.68■□□□□ 0.58
COL9A2-211ENST00000496215 MBD3L2Q8NHZ7 208 aaPredicted RBP18.68■□□□□ 0.58
COL9A2-211ENST00000496215 LRRC8CQ8TDW0 803 aa18.68■□□□□ 0.58
COL9A2-211ENST00000496215 MAELQ96JY0 434 aaKnown RBP18.68■□□□□ 0.58
COL9A2-211ENST00000496215 ZBTB18Q99592 522 aa18.68■□□□□ 0.58
COL9A2-211ENST00000496215 SH3GL2Q99962 352 aa18.68■□□□□ 0.58
COL9A2-211ENST00000496215 PIGQQ9BRB3 760 aa18.68■□□□□ 0.58
COL9A2-211ENST00000496215 ENKD1Q9H0I2 346 aa18.68■□□□□ 0.58
COL9A2-211ENST00000496215 CALHM2Q9HA72 323 aa18.68■□□□□ 0.58
COL9A2-211ENST00000496215 HMGB1P1B2RPK0 211 aaPredicted RBP18.67■□□□□ 0.58
COL9A2-211ENST00000496215 SCN2BO60939 215 aa18.67■□□□□ 0.58
COL9A2-211ENST00000496215 CPSF4O95639 269 aaKnown RBP18.67■□□□□ 0.58
COL9A2-211ENST00000496215 IDO1P14902 403 aa18.67■□□□□ 0.58
COL9A2-211ENST00000496215 BMP5P22003 454 aa18.67■□□□□ 0.58
COL9A2-211ENST00000496215 PHC1P78364 1004 aa18.67■□□□□ 0.58
COL9A2-211ENST00000496215 FLYWCH1Q4VC44 716 aa18.67■□□□□ 0.58
COL9A2-211ENST00000496215 SLC9B1Q4ZJI4 515 aa18.67■□□□□ 0.58
COL9A2-211ENST00000496215 MAVSQ7Z434 540 aa18.67■□□□□ 0.58
COL9A2-211ENST00000496215 ACTRT2Q8TDY3 377 aa18.67■□□□□ 0.58
COL9A2-211ENST00000496215 TEX37Q96LM6 180 aa18.67■□□□□ 0.58
COL9A2-211ENST00000496215 C7orf26Q96N11 449 aa18.67■□□□□ 0.58
COL9A2-211ENST00000496215 TREX2Q9BQ50 279 aaPredicted RBP18.67■□□□□ 0.58
COL9A2-211ENST00000496215 HOXD1Q9GZZ0 328 aa18.67■□□□□ 0.58
COL9A2-211ENST00000496215 SERHL2Q9H4I8 314 aa18.67■□□□□ 0.58
COL9A2-211ENST00000496215 VDAC3Q9Y277 283 aa18.67■□□□□ 0.58
COL9A2-211ENST00000496215 GPR45Q9Y5Y3 372 aa18.67■□□□□ 0.58
COL9A2-211ENST00000496215 KCNE3Q9Y6H6 103 aa18.67■□□□□ 0.58
COL9A2-211ENST00000496215 OTOGQ6ZRI0 2925 aa18.67■□□□□ 0.58
COL9A2-211ENST00000496215 POLQO75417 2590 aa18.66■□□□□ 0.58
COL9A2-211ENST00000496215 OR2M5A3KFT3 312 aa18.66■□□□□ 0.58
COL9A2-211ENST00000496215 DUXAA6NLW8 204 aa18.66■□□□□ 0.58
COL9A2-211ENST00000496215 CLCA1A8K7I4 914 aa18.66■□□□□ 0.58
COL9A2-211ENST00000496215 C9JVG2 144 aa18.66■□□□□ 0.58
COL9A2-211ENST00000496215 LINC01387J3KSC0 135 aa18.66■□□□□ 0.58
COL9A2-211ENST00000496215 AK1P00568 194 aa18.66■□□□□ 0.58
COL9A2-211ENST00000496215 IGFBP2P18065 325 aa18.66■□□□□ 0.58
COL9A2-211ENST00000496215 MATN1P21941 496 aa18.66■□□□□ 0.58
COL9A2-211ENST00000496215 UQCRC2P22695 453 aa18.66■□□□□ 0.58
COL9A2-211ENST00000496215 DGKQP52824 942 aa18.66■□□□□ 0.58
COL9A2-211ENST00000496215 BCL2A1Q16548 175 aa18.66■□□□□ 0.58
COL9A2-211ENST00000496215 GLYR1Q49A26 553 aaPredicted RBP18.66■□□□□ 0.58
COL9A2-211ENST00000496215 UBQLNLQ8IYU4 475 aa18.66■□□□□ 0.58
COL9A2-211ENST00000496215 MEIOBQ8N635 442 aa18.66■□□□□ 0.58
COL9A2-211ENST00000496215 GOT1L1Q8NHS2 421 aaPredicted RBP18.66■□□□□ 0.58
COL9A2-211ENST00000496215 DYDC1Q8WWB3 177 aa18.66■□□□□ 0.58
COL9A2-211ENST00000496215 SH3YL1Q96HL8 342 aaPredicted RBP18.66■□□□□ 0.58
COL9A2-211ENST00000496215 MARK4Q96L34 752 aa18.66■□□□□ 0.58
COL9A2-211ENST00000496215 CCDC115Q96NT0 180 aa18.66■□□□□ 0.58
COL9A2-211ENST00000496215 BTNL2Q9UIR0 455 aa18.66■□□□□ 0.58
COL9A2-211ENST00000496215 A0A087WZY1 265 aa18.65■□□□□ 0.58
COL9A2-211ENST00000496215 NPIPA5A0A0B4J1W7 369 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms