RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 VPS33AQ96AX1 596 aa14.9□□□□□ -0.02
SF3A1-209ENST00000496189 NTNG2Q96CW9 530 aa14.9□□□□□ -0.02
SF3A1-209ENST00000496189 NEURL3Q96EH8 262 aa14.9□□□□□ -0.02
SF3A1-209ENST00000496189 SFXN2Q96NB2 322 aa14.9□□□□□ -0.02
SF3A1-209ENST00000496189 OR7D2Q96RA2 312 aa14.9□□□□□ -0.02
SF3A1-209ENST00000496189 DMRTA2Q96SC8 542 aa14.9□□□□□ -0.02
SF3A1-209ENST00000496189 INPP5KQ9BT40 448 aa14.9□□□□□ -0.02
SF3A1-209ENST00000496189 FAM107BQ9H098 131 aa14.9□□□□□ -0.02
SF3A1-209ENST00000496189 DSN1Q9H410 356 aa14.9□□□□□ -0.02
SF3A1-209ENST00000496189 STOML1Q9UBI4 398 aa14.9□□□□□ -0.02
SF3A1-209ENST00000496189 KLF2Q9Y5W3 355 aaPredicted RBP14.9□□□□□ -0.02
SF3A1-209ENST00000496189 ASH1LQ9NR48 2969 aaKnown RBP14.9□□□□□ -0.02
SF3A1-209ENST00000496189 ALG1L2C9J202 215 aa14.89□□□□□ -0.03
SF3A1-209ENST00000496189 PRSS44E7EML9 344 aa14.89□□□□□ -0.03
SF3A1-209ENST00000496189 ANGPT2O15123 496 aa14.89□□□□□ -0.03
SF3A1-209ENST00000496189 CCDC22O60826 627 aa14.89□□□□□ -0.03
SF3A1-209ENST00000496189 CLDN14O95500 239 aa14.89□□□□□ -0.03
SF3A1-209ENST00000496189 IGKV1D-16P01601 117 aa14.89□□□□□ -0.03
SF3A1-209ENST00000496189 ZCCHC18P0CG32 403 aa14.89□□□□□ -0.03
SF3A1-209ENST00000496189 BMP7P18075 431 aa14.89□□□□□ -0.03
SF3A1-209ENST00000496189 ENDOUP21128 410 aaKnown RBP14.89□□□□□ -0.03
SF3A1-209ENST00000496189 MSX1P28360 303 aa14.89□□□□□ -0.03
SF3A1-209ENST00000496189 ADSLP30566 484 aaPredicted RBP14.89□□□□□ -0.03
SF3A1-209ENST00000496189 ZFP36L2P47974 494 aaKnown RBP14.89□□□□□ -0.03
SF3A1-209ENST00000496189 GAS1P54826 345 aa14.89□□□□□ -0.03
SF3A1-209ENST00000496189 ADORA2A-AS1P86434 159 aa14.89□□□□□ -0.03
SF3A1-209ENST00000496189 CRYZQ08257 329 aaKnown RBP14.89□□□□□ -0.03
SF3A1-209ENST00000496189 PMPCAQ10713 525 aa14.89□□□□□ -0.03
SF3A1-209ENST00000496189 EMC4Q5J8M3 183 aa14.89□□□□□ -0.03
SF3A1-209ENST00000496189 CCNJQ5T5M9 372 aa14.89□□□□□ -0.03
SF3A1-209ENST00000496189 VASNQ6EMK4 673 aa14.89□□□□□ -0.03
SF3A1-209ENST00000496189 ULK2Q8IYT8 1036 aa14.89□□□□□ -0.03
SF3A1-209ENST00000496189 C10orf82Q8WW14 230 aa14.89□□□□□ -0.03
SF3A1-209ENST00000496189 SDCCAG3Q96C92 435 aa14.89□□□□□ -0.03
SF3A1-209ENST00000496189 TIMP4Q99727 224 aa14.89□□□□□ -0.03
SF3A1-209ENST00000496189 ELAC2Q9BQ52 826 aaKnown RBP14.89□□□□□ -0.03
SF3A1-209ENST00000496189 ZNF385DQ9H6B1 395 aa14.89□□□□□ -0.03
SF3A1-209ENST00000496189 CHST11Q9NPF2 352 aa14.89□□□□□ -0.03
SF3A1-209ENST00000496189 MED11Q9P086 117 aa14.89□□□□□ -0.03
SF3A1-209ENST00000496189 FBXL2Q9UKC9 423 aa14.89□□□□□ -0.03
SF3A1-209ENST00000496189 DIDO1Q9BTC0 2240 aaKnown RBP14.89□□□□□ -0.03
SF3A1-209ENST00000496189 ZNF407Q9C0G0 2248 aa14.89□□□□□ -0.03
SF3A1-209ENST00000496189 DOPEY1Q5JWR5 2465 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 A0A1W2PP18 115 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 A0A1W2PQD3 144 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 H0Y3Z8 333 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 LINC01387J3KSC0 135 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 ADAM10O14672 748 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 STX11O75558 287 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 CLDN1O95832 211 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 GSNP06396 782 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 SNRPB2P08579 225 aaKnown RBP14.88□□□□□ -0.03
SF3A1-209ENST00000496189 HK1P19367 917 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 CHRNB4P30926 498 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 MAGEA8P43361 318 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 ZNF41P51814 821 aaPredicted RBP14.88□□□□□ -0.03
SF3A1-209ENST00000496189 MAPRE2Q15555 327 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 EXOSC6Q5RKV6 272 aaKnown RBP14.88□□□□□ -0.03
SF3A1-209ENST00000496189 RAET1LQ5VY80 246 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 SAXO2Q658L1 398 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 MYO7BQ6PIF6 2116 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 CHMP1BQ7LBR1 199 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 MTERF4Q7Z6M4 381 aaKnown RBP14.88□□□□□ -0.03
SF3A1-209ENST00000496189 ZNF614Q8N883 585 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 OR2M3Q8NG83 312 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 OR5D16Q8NGK9 328 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 OR4C3Q8NH37 302 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 MIPOL1Q8TD10 442 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 PIGQQ9BRB3 760 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 UGT2B28Q9BY64 529 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 PRDM14Q9GZV8 571 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 OR51I1Q9H343 314 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 RAD21L1Q9H4I0 556 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 RUBCNLQ9H714 662 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 FAM53CQ9NYF3 392 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 FLRT3Q9NZU0 649 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 RPH3AQ9Y2J0 694 aaPredicted RBP14.88□□□□□ -0.03
SF3A1-209ENST00000496189 NDUFAF1Q9Y375 327 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 PTPN13Q12923 2485 aa14.88□□□□□ -0.03
SF3A1-209ENST00000496189 DNAJC13O75165 2243 aa14.87□□□□□ -0.03
SF3A1-209ENST00000496189 A0A096LPI6 279 aa14.87□□□□□ -0.03
SF3A1-209ENST00000496189 GTPBP1O00178 669 aaKnown RBP14.87□□□□□ -0.03
SF3A1-209ENST00000496189 SLC22A2O15244 555 aa14.87□□□□□ -0.03
SF3A1-209ENST00000496189 DRD4P21917 467 aa14.87□□□□□ -0.03
SF3A1-209ENST00000496189 CHMP24386 653 aa14.87□□□□□ -0.03
SF3A1-209ENST00000496189 DCTP40126 519 aa14.87□□□□□ -0.03
SF3A1-209ENST00000496189 CDKN2CP42773 168 aa14.87□□□□□ -0.03
SF3A1-209ENST00000496189 RPS26P62854 115 aaKnown RBP14.87□□□□□ -0.03
SF3A1-209ENST00000496189 ZNF630Q2M218 657 aaPredicted RBP14.87□□□□□ -0.03
SF3A1-209ENST00000496189 TNFAIP8L2Q6P589 184 aaPredicted RBP14.87□□□□□ -0.03
SF3A1-209ENST00000496189 SLC2A7Q6PXP3 512 aa14.87□□□□□ -0.03
SF3A1-209ENST00000496189 DNAJC14Q6Y2X3 702 aaPredicted RBP14.87□□□□□ -0.03
SF3A1-209ENST00000496189 CLEC4FQ8N1N0 589 aa14.87□□□□□ -0.03
SF3A1-209ENST00000496189 FADS6Q8N9I5 356 aa14.87□□□□□ -0.03
SF3A1-209ENST00000496189 XAGE5Q8WWM1 108 aa14.87□□□□□ -0.03
SF3A1-209ENST00000496189 GTF2H4Q92759 462 aa14.87□□□□□ -0.03
SF3A1-209ENST00000496189 TTYH2Q9BSA4 534 aa14.87□□□□□ -0.03
SF3A1-209ENST00000496189 SAR1AQ9NR31 198 aa14.87□□□□□ -0.03
SF3A1-209ENST00000496189 LEF1Q9UJU2 399 aaPredicted RBP14.87□□□□□ -0.03
SF3A1-209ENST00000496189 FLNBO75369 2602 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms