RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-240	ENST00000495293	SLC22A2	O15244	555 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	NDUFS4	O43181	175 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	DHH	O43323	396 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	CTSV	O60911	334 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	KERA	O60938	352 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	CRCP	O75575	148 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	C2	P06681	752 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	C1GALT1C1L	P0DN25	315 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	CDH1	P12830	882 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	ZNF10	P21506	573 aa	Predicted RBP	4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	GSTM2	P28161	218 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	ABCD3	P28288	659 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	OTX2	P32243	289 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	RORA	P35398	523 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	AHR	P35869	848 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	SERPINB5	P36952	375 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	ARL1	P40616	181 aa	Predicted RBP	4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	OR1D4	P47884	311 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	GABRA4	P48169	554 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	RPL14	P50914	215 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	CCR9	P51686	369 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	PGGT1B	P53609	377 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	STX1B	P61266	288 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	STXBP1	P61764	594 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	CSNK1G2	P78368	415 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	PHEX	P78562	749 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	ARF1	P84077	181 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	IRF8	Q02556	426 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	TGM3	Q08188	693 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	TBL3	Q12788	808 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	CDC16	Q13042	620 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	STX5	Q13190	355 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	SRSF6	Q13247	344 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	FAM53B	Q14153	422 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	MFSD13A	Q14CX5	517 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	HERC3	Q15034	1050 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	RPS6KA2	Q15349	733 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	TRIP10	Q15642	601 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	RBBP7	Q16576	425 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	PPP1R3A	Q16821	1122 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	HKDC1	Q2TB90	917 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	XKR6	Q5GH73	641 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	MFSD4B	Q5TF39	518 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	LIPM	Q5VYY2	423 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	ABLIM2	Q6H8Q1	611 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	IZUMO2	Q6UXV1	221 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	ZCCHC23	Q6ZST2	131 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	ABHD13	Q7L211	337 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	R3HCC1L	Q7Z5L2	792 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	CMC1	Q7Z7K0	106 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	TMPRSS11B	Q86T26	416 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	PLD3	Q8IV08	490 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	DEFB107A	Q8IZN7	70 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	OR4N4	Q8N0Y3	316 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	METTL27	Q8N6F8	245 aa	Predicted RBP	4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	NANOGP1	Q8N7R0	232 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	CCNYL1	Q8N7R7	359 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	NKAIN3	Q8N8D7	197 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	MFSD9	Q8NBP5	474 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	SLC38A9	Q8NBW4	561 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	CLEC1A	Q8NC01	280 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	TRPV3	Q8NET8	790 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	OSR1	Q8TAX0	266 aa	Predicted RBP	4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	WDR60	Q8WVS4	1066 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	METTL21A	Q8WXB1	218 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	NEIL2	Q969S2	332 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	UBE2E3	Q969T4	207 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	RHBDF1	Q96CC6	855 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	NXNL1	Q96CM4	212 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	CCDC124	Q96CT7	223 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	CCDC126	Q96EE4	140 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	HS6ST2	Q96MM7	605 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	OR2A5	Q96R48	311 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	TMEM79	Q9BSE2	394 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	EFCAB11	Q9BUY7	163 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	CCDC106	Q9BWC9	280 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	TRIM15	Q9C019	465 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	DRC3	Q9H069	523 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	ADNP	Q9H2P0	1102 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	WDR54	Q9H977	334 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	EFCAB1	Q9HAE3	211 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	SAP30L	Q9HAJ7	183 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	PELI2	Q9HAT8	420 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	KCNK13	Q9HB14	408 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	PFDN4	Q9NQP4	134 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	DNAJC11	Q9NVH1	559 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	NDUFAF4	Q9P032	175 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	COPG2	Q9UBF2	871 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	OPTC	Q9UBM4	332 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	TRPC4	Q9UBN4	977 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	HEMK1	Q9Y5R4	338 aa	Predicted RBP	4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	MRPS18B	Q9Y676	258 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	MAU2	Q9Y6X3	613 aa		4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	MAP1B	P46821	2468 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	TPR	P12270	2363 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-240	ENST00000495293	ASPM	Q8IZT6	3477 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms