RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 GCNT6Q5T4J0 391 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 C1orf94Q6P1W5 598 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 WDR53Q7Z5U6 358 aaPredicted RBP4.49□□□□□ -1.69
PRKD3-210ENST00000494667 MRPL52Q86TS9 123 aaKnown RBP4.49□□□□□ -1.69
PRKD3-210ENST00000494667 PARGQ86W56 976 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 CCDC116Q8IYX3 515 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 SVIPQ8NHG7 77 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 GPBAR1Q8TDU6 330 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 LCN9Q8WX39 176 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 PHYHIPQ92561 330 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 TPD52L3Q96J77 140 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 MMP26Q9NRE1 261 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 SMCO4Q9NRQ5 59 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 SLC22A11Q9NSA0 550 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 FAM86C1Q9NVL1 165 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 C14orf105Q9NVL8 296 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 DDIT4Q9NX09 232 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 TAS2R3Q9NYW6 316 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 SLC45A1Q9Y2W3 748 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 NUP210Q8TEM1 1887 aaPredicted RBP4.49□□□□□ -1.69
PRKD3-210ENST00000494667 PAPPA2Q9BXP8 1791 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 TBC1D3DA0A087WVF3 549 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 TBC1D3IA0A087WXS9 549 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 TBC1D3EA0A087X179 549 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 TBC1D3KA0A087X1G2 549 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 OR6C74A6NCV1 312 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 TBC1D3FA6NER0 549 aaPredicted RBP4.49□□□□□ -1.69
PRKD3-210ENST00000494667 YJEFN3A6XGL0 299 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 TBC1D3LB9A6J9 549 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 FFAR3O14843 346 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 GPR42O15529 346 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 PCDH8O95206 1070 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 CCR1P32246 355 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 RPL3P39023 403 aaKnown RBP4.49□□□□□ -1.69
PRKD3-210ENST00000494667 RAB5CP51148 216 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 CAV3P56539 151 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 SCAND1P57086 179 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 HGFACQ04756 655 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 NFATC2Q13469 925 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 HMGN3Q15651 99 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 FBXO47Q5MNV8 452 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 AADACL4Q5VUY2 407 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 TBC1D3CQ6IPX1 549 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 NOXRED1Q6NXP6 359 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 DEF8Q6ZN54 512 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 ASB18Q6ZVZ8 466 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 TAC4Q86UU9 113 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 GPR65Q8IYL9 337 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 TBC1D3Q8IZP1 549 aaPredicted RBP4.49□□□□□ -1.69
PRKD3-210ENST00000494667 NAGSQ8N159 534 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 HORMAD2Q8N7B1 307 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 BEND2Q8NDZ0 799 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 SDR9C7Q8NEX9 313 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 OR6B3Q8NGW1 331 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 RNASE11Q8TAA1 199 aaKnown RBP4.49□□□□□ -1.69
PRKD3-210ENST00000494667 POF1BQ8WVV4 589 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 SORCS1Q8WY21 1168 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 EXOSC8Q96B26 276 aaKnown RBP4.49□□□□□ -1.69
PRKD3-210ENST00000494667 RNFT2Q96EX2 444 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 MYEOVQ96EZ4 313 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 CDCA3Q99618 268 aaPredicted RBP4.49□□□□□ -1.69
PRKD3-210ENST00000494667 ZNF426Q9BUY5 554 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 ULBP1Q9BZM6 244 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 BRF2Q9HAW0 419 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 A4GALTQ9NPC4 353 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 SLAMF7Q9NQ25 335 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 TLR8Q9NR97 1041 aaKnown RBP4.49□□□□□ -1.69
PRKD3-210ENST00000494667 ZNF214Q9UL59 606 aaPredicted RBP4.49□□□□□ -1.69
PRKD3-210ENST00000494667 NUP210LQ5VU65 1888 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 TRAV14DV4A0A0A6YYC5 116 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 F5H5P2 479 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 HBP1O60381 514 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 KDM4BO94953 1096 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 VNN2O95498 520 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 PDYNP01213 254 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 EPB42P16452 691 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 RHOQP17081 205 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 ARF4P18085 180 aaPredicted RBP4.49□□□□□ -1.69
PRKD3-210ENST00000494667 ANXA7P20073 488 aaKnown RBP4.49□□□□□ -1.69
PRKD3-210ENST00000494667 XPAP23025 273 aaPredicted RBP4.49□□□□□ -1.69
PRKD3-210ENST00000494667 CD86P42081 329 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 SLC6A12P48065 614 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 CCR6P51684 374 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 SMSP52788 366 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 TAS2R43P59537 309 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 FAM189BP81408 668 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 ELAVL2Q12926 359 aaKnown RBP4.49□□□□□ -1.69
PRKD3-210ENST00000494667 PDZK1IP1Q13113 114 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 KLHL26Q53HC5 615 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 UBE2NLQ5JXB2 153 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 ZNF322Q6U7Q0 402 aaPredicted RBP4.49□□□□□ -1.69
PRKD3-210ENST00000494667 VITQ6UXI7 678 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 ZNF783Q6ZMS7 281 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 GAREM2Q75VX8 874 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 DCXRQ7Z4W1 244 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 CBLN2Q8IUK8 224 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 NPAS3Q8IXF0 933 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 TMEM130Q8N3G9 435 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 THAP6Q8TBB0 222 aa4.49□□□□□ -1.69
PRKD3-210ENST00000494667 THAP4Q8WY91 577 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms