RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 ZNF304Q9HCX3 659 aa15.3■□□□□ 0.04
ATG4B-225ENST00000494465 ACOT13Q9NPJ3 140 aa15.3■□□□□ 0.04
ATG4B-225ENST00000494465 SLC7A7Q9UM01 511 aa15.3■□□□□ 0.04
ATG4B-225ENST00000494465 ASCC3Q8N3C0 2202 aaKnown RBP15.3■□□□□ 0.04
ATG4B-225ENST00000494465 ZNF99A8MXY4 864 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-225ENST00000494465 C17orf105B2RV13 164 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 MPZL2O60487 215 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 ATE1O95260 518 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 IFNA8P32881 189 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 SNRPGP62308 76 aaKnown RBP15.29■□□□□ 0.04
ATG4B-225ENST00000494465 CCL7P80098 99 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 RHAGQ02094 409 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 PTCHD4Q6ZW05 846 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 RANBP3LQ86VV4 465 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-225ENST00000494465 ERI1Q8IV48 349 aaKnown RBP15.29■□□□□ 0.04
ATG4B-225ENST00000494465 IQCF1Q8N6M8 205 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 ZNF321PQ8N8H1 164 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 TMEM105Q8N8V8 129 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 GNPDA2Q8TDQ7 276 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 SENP5Q96HI0 755 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-225ENST00000494465 ITPAQ9BY32 194 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 PLA2G12AQ9BZM1 189 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 CNIH4Q9P003 139 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 A0A1B0GX78 115 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 KLF4O43474 513 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 MAN1A2O60476 641 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 FADS2O95864 444 aaKnown RBP15.29■□□□□ 0.04
ATG4B-225ENST00000494465 ANKRD34CP0C6C1 535 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 GSTM3P21266 225 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 FBLP22087 321 aaKnown RBP15.29■□□□□ 0.04
ATG4B-225ENST00000494465 C21orf33P30042 268 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-225ENST00000494465 CDK5Q00535 292 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 TSPAN31Q12999 210 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 NNATQ16517 81 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 VWA2Q5GFL6 755 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 YOD1Q5VVQ6 348 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-225ENST00000494465 WDR88Q6ZMY6 472 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 TOR1AIP2Q8NFQ8 470 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 CNOT9Q92600 299 aaKnown RBP15.29■□□□□ 0.04
ATG4B-225ENST00000494465 FAM46AQ96IP4 442 aaKnown RBP15.29■□□□□ 0.04
ATG4B-225ENST00000494465 POLR2J2Q9GZM3 115 aaKnown RBP15.29■□□□□ 0.04
ATG4B-225ENST00000494465 Q9N2J8 555 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 GPR83Q9NYM4 423 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 SELENONQ9NZV5 590 aa15.29■□□□□ 0.04
ATG4B-225ENST00000494465 TRAPPC13A5PLN9 417 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 FMO6PO60774 539 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 ADAM11O75078 769 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 CDK1P06493 297 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 IFNGR2P38484 337 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 TMBIM6P55061 237 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 SLC37A1P57057 533 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 OR1Q1Q15612 314 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 ZNF141Q15928 474 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 MINDY4Q4G0A6 757 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 SYT6Q5T7P8 510 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-225ENST00000494465 C1orf189Q5VU69 101 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 MBOAT2Q6ZWT7 520 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 GRAMD2AQ8IUY3 354 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 POGLUT1Q8NBL1 392 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 OR7G1Q8NGA0 311 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 ARSGQ96EG1 525 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 IL4I1Q96RQ9 567 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 DSN1Q9H410 356 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 EGLN3Q9H6Z9 239 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 PNO1Q9NRX1 252 aaKnown RBP15.28■□□□□ 0.04
ATG4B-225ENST00000494465 SH3D21A4FU49 640 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 TMX2-CTNND1H3BSU7 103 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 PIP5K1CO60331 668 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 RPLP0P05388 317 aaKnown RBP15.28■□□□□ 0.04
ATG4B-225ENST00000494465 GIPRP48546 466 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 EFNB1P98172 346 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 TMEM201Q5SNT2 666 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 ACSM5Q6NUN0 579 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 NRMQ8IXM6 262 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 SVOPQ8N4V2 548 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 EID2Q8N6I1 236 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 BCORP1Q8N888 145 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 OR8D4Q8NGM9 314 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 PIGXQ8TBF5 258 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 DPYSL5Q9BPU6 564 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 SLC25A19Q9HC21 320 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 TESQ9UGI8 421 aaKnown RBP15.28■□□□□ 0.04
ATG4B-225ENST00000494465 CBLCQ9ULV8 474 aa15.28■□□□□ 0.04
ATG4B-225ENST00000494465 TCRBV16S1A1N1A0A5B0 115 aa15.27■□□□□ 0.04
ATG4B-225ENST00000494465 YKT6O15498 198 aa15.27■□□□□ 0.04
ATG4B-225ENST00000494465 IGKV3-11P04433 115 aa15.27■□□□□ 0.04
ATG4B-225ENST00000494465 SLC15A1P46059 708 aa15.27■□□□□ 0.04
ATG4B-225ENST00000494465 MFSD4BQ5TF39 518 aa15.27■□□□□ 0.04
ATG4B-225ENST00000494465 B3GNT7Q8NFL0 401 aa15.27■□□□□ 0.04
ATG4B-225ENST00000494465 OR4D9Q8NGE8 314 aa15.27■□□□□ 0.04
ATG4B-225ENST00000494465 TRUB1Q8WWH5 349 aaKnown RBP15.27■□□□□ 0.04
ATG4B-225ENST00000494465 RORBQ92753 470 aa15.27■□□□□ 0.04
ATG4B-225ENST00000494465 FGF11Q92914 225 aa15.27■□□□□ 0.04
ATG4B-225ENST00000494465 RNF31Q96EP0 1072 aa15.27■□□□□ 0.04
ATG4B-225ENST00000494465 FUNDC2Q9BWH2 189 aa15.27■□□□□ 0.04
ATG4B-225ENST00000494465 SLC22A11Q9NSA0 550 aa15.27■□□□□ 0.04
ATG4B-225ENST00000494465 DNAJB12Q9NXW2 375 aaKnown RBP15.27■□□□□ 0.04
ATG4B-225ENST00000494465 PRODH2Q9UF12 536 aa15.27■□□□□ 0.04
ATG4B-225ENST00000494465 IGHV5-10-1A0A0J9YXX1 117 aa15.27■□□□□ 0.03
ATG4B-225ENST00000494465 TTC36A6NLP5 189 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms