RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 C14orf105Q9NVL8 296 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 NLGN3Q9NZ94 848 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 ZNF223Q9UK11 482 aaPredicted RBP9.87□□□□□ -0.83
CLCN6-208ENST00000494028 SLC7A7Q9UM01 511 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 ZNF232Q9UNY5 417 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 MAU2Q9Y6X3 613 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 U3KQA8 63 aa9.87□□□□□ -0.83
CLCN6-208ENST00000494028 A0A1B0GTQ1 180 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 M0R082 166 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 DSCR3O14972 297 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 MSL3P1P0C860 447 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 FOLR1P15328 257 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 GNSP15586 552 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 TNNI3P19429 210 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 PTNP21246 168 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 NR4A1P22736 598 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 C21orf33P30042 268 aaPredicted RBP9.86□□□□□ -0.83
CLCN6-208ENST00000494028 ARRB1P49407 418 aaPredicted RBP9.86□□□□□ -0.83
CLCN6-208ENST00000494028 HSD11B2P80365 405 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 ZXDAP98168 799 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 CDK5Q00535 292 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 DSG2Q14126 1118 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 DOC2BQ14184 412 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 GINS1Q14691 196 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 ZNF141Q15928 474 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 NNATQ16517 81 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 OCLNQ16625 522 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 SNAP47Q5SQN1 464 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 PDZK1Q5T2W1 519 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 CASP12Q6UXS9 341 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 QSOX2Q6ZRP7 698 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 ZNF367Q7RTV3 350 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 PRICKLE2Q7Z3G6 844 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 P2RY8Q86VZ1 359 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 GATAD2AQ86YP4 633 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 NRMQ8IXM6 262 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 CACTIN-AS1Q8N1I8 211 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 CLDN22Q8N7P3 220 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 TCEANCQ8N8B7 351 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 ZNF615Q8N8J6 731 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 ZSCAN1Q8NBB4 408 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 OR4N2Q8NGD1 307 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 OR8J1Q8NGP2 316 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 OR4Q3Q8NH05 313 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 C16orf52Q8NHV5 167 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 GAB3Q8WWW8 586 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 CNOT9Q92600 299 aaKnown RBP9.86□□□□□ -0.83
CLCN6-208ENST00000494028 ARSGQ96EG1 525 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 ZNF578Q96N58 590 aaPredicted RBP9.86□□□□□ -0.83
CLCN6-208ENST00000494028 OR1F2PQ96R84 312 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 IL4I1Q96RQ9 567 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 CAPN10Q9HC96 672 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 Q9N2J8 555 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 TIMMDC1Q9NPL8 285 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 FSCN3Q9NQT6 498 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 TBC1D23Q9NUY8 699 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 DNAJB12Q9NXW2 375 aaKnown RBP9.86□□□□□ -0.83
CLCN6-208ENST00000494028 DHCR7Q9UBM7 475 aaKnown RBP9.86□□□□□ -0.83
CLCN6-208ENST00000494028 CDH10Q9Y6N8 788 aa9.86□□□□□ -0.83
CLCN6-208ENST00000494028 TTC36A6NLP5 189 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 GKN3PP0CG01 181 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 DBTP11182 482 aaKnown RBP9.85□□□□□ -0.83
CLCN6-208ENST00000494028 CDK4P11802 303 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 FBLP22087 321 aaKnown RBP9.85□□□□□ -0.83
CLCN6-208ENST00000494028 STAT5AP42229 794 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 OR1D4P47884 311 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 RFX3P48380 749 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 ARL4DP49703 201 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 ST13P50502 369 aaKnown RBP9.85□□□□□ -0.83
CLCN6-208ENST00000494028 PGDP52209 483 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 SMSP52788 366 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 RHAGQ02094 409 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 OCA2Q04671 838 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 FGFBP1Q14512 234 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 OR1Q1Q15612 314 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.85□□□□□ -0.83
CLCN6-208ENST00000494028 PGGHGQ32M88 737 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 PERM1Q5SV97 790 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 PRAMEF17Q5VTA0 474 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 PEAR1Q5VY43 1037 aaPredicted RBP9.85□□□□□ -0.83
CLCN6-208ENST00000494028 ACSM5Q6NUN0 579 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 GUSBP11Q6P575 273 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 WDR74Q6RFH5 385 aaPredicted RBP9.85□□□□□ -0.83
CLCN6-208ENST00000494028 TTLL10Q6ZVT0 673 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 SLC46A3Q7Z3Q1 461 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 TMPRSS9Q7Z410 1059 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 BCDIN3DQ7Z5W3 292 aaKnown RBP9.85□□□□□ -0.83
CLCN6-208ENST00000494028 GRAMD2AQ8IUY3 354 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 STX19Q8N4C7 294 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 ZNF614Q8N883 585 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 OR4C6Q8NH72 309 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 PFN4Q8NHR9 129 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 WDR36Q8NI36 951 aaKnown RBP9.85□□□□□ -0.83
CLCN6-208ENST00000494028 TBC1D15Q8TC07 691 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 ZNF501Q96CX3 271 aaPredicted RBP9.85□□□□□ -0.83
CLCN6-208ENST00000494028 TSSK6Q9BXA6 273 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 CDCA4Q9BXL8 241 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 SUSD2Q9UGT4 822 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 PILRBQ9UKJ0 227 aa9.85□□□□□ -0.83
CLCN6-208ENST00000494028 VCANP13611 3396 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms