RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 EIF3MQ7L2H7 374 aaKnown RBP17.77■□□□□ 0.44
USP39-218ENST00000493829 MARCH3Q86UD3 253 aa17.77■□□□□ 0.44
USP39-218ENST00000493829 VANGL1Q8TAA9 524 aaPredicted RBP17.77■□□□□ 0.44
USP39-218ENST00000493829 GRHL3Q8TE85 626 aa17.77■□□□□ 0.44
USP39-218ENST00000493829 TMCO6Q96DC7 493 aa17.77■□□□□ 0.44
USP39-218ENST00000493829 CRELD1Q96HD1 420 aa17.77■□□□□ 0.44
USP39-218ENST00000493829 RTN4RQ9BZR6 473 aa17.77■□□□□ 0.44
USP39-218ENST00000493829 METTL7AQ9H8H3 244 aa17.77■□□□□ 0.44
USP39-218ENST00000493829 KLRF1Q9NZS2 232 aa17.77■□□□□ 0.44
USP39-218ENST00000493829 RRP15Q9Y3B9 282 aaKnown RBP17.77■□□□□ 0.44
USP39-218ENST00000493829 LOC400499M0QZD8 3231 aa17.77■□□□□ 0.44
USP39-218ENST00000493829 PRAMEF25A6NGN4 478 aa17.77■□□□□ 0.43
USP39-218ENST00000493829 TMEM229AB2RXF0 380 aa17.77■□□□□ 0.43
USP39-218ENST00000493829 H0YHG0 523 aa17.77■□□□□ 0.43
USP39-218ENST00000493829 CYP7B1O75881 506 aa17.77■□□□□ 0.43
USP39-218ENST00000493829 GUSBP08236 651 aa17.77■□□□□ 0.43
USP39-218ENST00000493829 CCL3P10147 92 aa17.77■□□□□ 0.43
USP39-218ENST00000493829 NID1P14543 1247 aa17.77■□□□□ 0.43
USP39-218ENST00000493829 TBXA2RP21731 343 aa17.77■□□□□ 0.43
USP39-218ENST00000493829 CYB561P49447 251 aa17.77■□□□□ 0.43
USP39-218ENST00000493829 HLCSP50747 726 aa17.77■□□□□ 0.43
USP39-218ENST00000493829 TUBA3CQ13748 450 aa17.77■□□□□ 0.43
USP39-218ENST00000493829 TUBA3EQ6PEY2 450 aa17.77■□□□□ 0.43
USP39-218ENST00000493829 NUP54Q7Z3B4 507 aa17.77■□□□□ 0.43
USP39-218ENST00000493829 MDGA2Q7Z553 956 aa17.77■□□□□ 0.43
USP39-218ENST00000493829 EID3Q8N140 333 aa17.77■□□□□ 0.43
USP39-218ENST00000493829 CLIP4Q8N3C7 705 aa17.77■□□□□ 0.43
USP39-218ENST00000493829 POGLUT1Q8NBL1 392 aa17.77■□□□□ 0.43
USP39-218ENST00000493829 UTP23Q9BRU9 249 aaKnown RBP17.77■□□□□ 0.43
USP39-218ENST00000493829 HOXD1Q9GZZ0 328 aa17.77■□□□□ 0.43
USP39-218ENST00000493829 IFT52Q9Y366 437 aa17.77■□□□□ 0.43
USP39-218ENST00000493829 SH3GLB1Q9Y371 365 aa17.77■□□□□ 0.43
USP39-218ENST00000493829 DTNAQ9Y4J8 743 aa17.77■□□□□ 0.43
USP39-218ENST00000493829 AQP12BA6NM10 295 aa17.76■□□□□ 0.43
USP39-218ENST00000493829 M0R3H8 397 aa17.76■□□□□ 0.43
USP39-218ENST00000493829 TP53I11O14683 189 aa17.76■□□□□ 0.43
USP39-218ENST00000493829 EPPINO95925 133 aa17.76■□□□□ 0.43
USP39-218ENST00000493829 THBS1P07996 1170 aa17.76■□□□□ 0.43
USP39-218ENST00000493829 CD96P40200 585 aa17.76■□□□□ 0.43
USP39-218ENST00000493829 OR1E2P47887 323 aa17.76■□□□□ 0.43
USP39-218ENST00000493829 SELENOWP63302 87 aa17.76■□□□□ 0.43
USP39-218ENST00000493829 EEF1A1P68104 462 aaKnown RBP17.76■□□□□ 0.43
USP39-218ENST00000493829 MFAP5Q13361 173 aa17.76■□□□□ 0.43
USP39-218ENST00000493829 KLHL26Q53HC5 615 aa17.76■□□□□ 0.43
USP39-218ENST00000493829 MTX3Q5HYI7 312 aa17.76■□□□□ 0.43
USP39-218ENST00000493829 BORAQ6PGQ7 559 aa17.76■□□□□ 0.43
USP39-218ENST00000493829 AQP12AQ8IXF9 295 aa17.76■□□□□ 0.43
USP39-218ENST00000493829 PHOSPHO1Q8TCT1 267 aa17.76■□□□□ 0.43
USP39-218ENST00000493829 LZICQ8WZA0 190 aa17.76■□□□□ 0.43
USP39-218ENST00000493829 PROX1Q92786 737 aa17.76■□□□□ 0.43
USP39-218ENST00000493829 SLC47A1Q96FL8 570 aa17.76■□□□□ 0.43
USP39-218ENST00000493829 RNF145Q96MT1 663 aa17.76■□□□□ 0.43
USP39-218ENST00000493829 SIGLEC12Q96PQ1 595 aa17.76■□□□□ 0.43
USP39-218ENST00000493829 DOHHQ9BU89 302 aa17.76■□□□□ 0.43
USP39-218ENST00000493829 PINK1Q9BXM7 581 aa17.76■□□□□ 0.43
USP39-218ENST00000493829 LRFN1Q9P244 771 aa17.76■□□□□ 0.43
USP39-218ENST00000493829 ANAPC2Q9UJX6 822 aa17.76■□□□□ 0.43
USP39-218ENST00000493829 SLC13A4Q9UKG4 626 aa17.76■□□□□ 0.43
USP39-218ENST00000493829 ZNF232Q9UNY5 417 aa17.76■□□□□ 0.43
USP39-218ENST00000493829 CHST2Q9Y4C5 530 aa17.76■□□□□ 0.43
USP39-218ENST00000493829 CHCHD2Q9Y6H1 151 aaPredicted RBP17.76■□□□□ 0.43
USP39-218ENST00000493829 TCRBV3S1A0A5B6 114 aa17.75■□□□□ 0.43
USP39-218ENST00000493829 DHRS12A0PJE2 317 aa17.75■□□□□ 0.43
USP39-218ENST00000493829 SERINC4A6NH21 518 aa17.75■□□□□ 0.43
USP39-218ENST00000493829 FADS1O60427 444 aa17.75■□□□□ 0.43
USP39-218ENST00000493829 FESP07332 822 aa17.75■□□□□ 0.43
USP39-218ENST00000493829 UBTFL6P0CB48 400 aaPredicted RBP17.75■□□□□ 0.43
USP39-218ENST00000493829 LCN1P31025 176 aa17.75■□□□□ 0.43
USP39-218ENST00000493829 PRKAR1BP31321 381 aa17.75■□□□□ 0.43
USP39-218ENST00000493829 KCNJ5P48544 419 aa17.75■□□□□ 0.43
USP39-218ENST00000493829 ARG2P78540 354 aa17.75■□□□□ 0.43
USP39-218ENST00000493829 ELF3P78545 371 aaPredicted RBP17.75■□□□□ 0.43
USP39-218ENST00000493829 FGFBP1Q14512 234 aa17.75■□□□□ 0.43
USP39-218ENST00000493829 SPINK14Q6IE38 97 aa17.75■□□□□ 0.43
USP39-218ENST00000493829 RTL4Q6ZR62 310 aa17.75■□□□□ 0.43
USP39-218ENST00000493829 ADGRG5Q8IZF4 528 aa17.75■□□□□ 0.43
USP39-218ENST00000493829 TMCO5AQ8N6Q1 288 aa17.75■□□□□ 0.43
USP39-218ENST00000493829 CANT1Q8WVQ1 401 aa17.75■□□□□ 0.43
USP39-218ENST00000493829 PYDC1Q8WXC3 89 aa17.75■□□□□ 0.43
USP39-218ENST00000493829 TTC9Q92623 222 aa17.75■□□□□ 0.43
USP39-218ENST00000493829 EXTL1Q92935 676 aa17.75■□□□□ 0.43
USP39-218ENST00000493829 SH3YL1Q96HL8 342 aaPredicted RBP17.75■□□□□ 0.43
USP39-218ENST00000493829 PYURFQ96I23 114 aa17.75■□□□□ 0.43
USP39-218ENST00000493829 WFDC6Q9BQY6 131 aa17.75■□□□□ 0.43
USP39-218ENST00000493829 OLAHQ9NV23 265 aa17.75■□□□□ 0.43
USP39-218ENST00000493829 LAMA5O15230 3695 aa17.75■□□□□ 0.43
USP39-218ENST00000493829 TMEM8BA6NDV4 472 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 OIP5O43482 229 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 ANGPTL1O95841 491 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 CSTAP01040 98 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 C8BP07358 591 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 PSMA4P25789 261 aaKnown RBP17.74■□□□□ 0.43
USP39-218ENST00000493829 KCNJ10P78508 379 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 HOXC5Q00444 222 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 PLAURQ03405 335 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 OR1C1Q15619 314 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 TBR1Q16650 682 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 DHRS4L2Q6PKH6 230 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 ZNF227Q86WZ6 799 aa17.74■□□□□ 0.43
USP39-218ENST00000493829 LACC1Q8IV20 430 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms