RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 FAM110BQ8TC76 370 aa18.54■□□□□ 0.56
CLTA-208ENST00000493185 FAM120BQ96EK7 910 aaKnown RBP18.54■□□□□ 0.56
CLTA-208ENST00000493185 CHMP6Q96FZ7 201 aa18.54■□□□□ 0.56
CLTA-208ENST00000493185 C16orf58Q96GQ5 468 aa18.54■□□□□ 0.56
CLTA-208ENST00000493185 PRPF18Q99633 342 aaKnown RBP18.54■□□□□ 0.56
CLTA-208ENST00000493185 C1orf50Q9BV19 199 aa18.54■□□□□ 0.56
CLTA-208ENST00000493185 SIRT3Q9NTG7 399 aaPredicted RBP18.54■□□□□ 0.56
CLTA-208ENST00000493185 ZDHHC2Q9UIJ5 367 aa18.54■□□□□ 0.56
CLTA-208ENST00000493185 VDAC3Q9Y277 283 aa18.54■□□□□ 0.56
CLTA-208ENST00000493185 PLEKHA6Q9Y2H5 1048 aa18.54■□□□□ 0.56
CLTA-208ENST00000493185 SNX8Q9Y5X2 465 aa18.54■□□□□ 0.56
CLTA-208ENST00000493185 HRNRQ86YZ3 2850 aaPredicted RBP18.53■□□□□ 0.56
CLTA-208ENST00000493185 NUP214P35658 2090 aaPredicted RBP18.53■□□□□ 0.56
CLTA-208ENST00000493185 A0A087WZY1 265 aa18.53■□□□□ 0.56
CLTA-208ENST00000493185 SH3D21A4FU49 640 aa18.53■□□□□ 0.56
CLTA-208ENST00000493185 H0YC42 278 aa18.53■□□□□ 0.56
CLTA-208ENST00000493185 HSPA4LO95757 839 aa18.53■□□□□ 0.56
CLTA-208ENST00000493185 LAMP1P11279 417 aa18.53■□□□□ 0.56
CLTA-208ENST00000493185 CREB1P16220 341 aa18.53■□□□□ 0.56
CLTA-208ENST00000493185 ZNF17P17021 662 aa18.53■□□□□ 0.56
CLTA-208ENST00000493185 ARRB2P32121 409 aa18.53■□□□□ 0.56
CLTA-208ENST00000493185 TPD52P55327 224 aaPredicted RBP18.53■□□□□ 0.56
CLTA-208ENST00000493185 RIPPLY3P57055 190 aa18.53■□□□□ 0.56
CLTA-208ENST00000493185 OCRLQ01968 901 aa18.53■□□□□ 0.56
CLTA-208ENST00000493185 PTGR1Q14914 329 aa18.53■□□□□ 0.56
CLTA-208ENST00000493185 SGCBQ16585 318 aa18.53■□□□□ 0.56
CLTA-208ENST00000493185 C6orf136Q5SQH8 315 aa18.53■□□□□ 0.56
CLTA-208ENST00000493185 MISPQ8IVT2 679 aa18.53■□□□□ 0.56
CLTA-208ENST00000493185 GATSQ8NAP1 163 aa18.53■□□□□ 0.56
CLTA-208ENST00000493185 CHDHQ8NE62 594 aaPredicted RBP18.53■□□□□ 0.56
CLTA-208ENST00000493185 OR5P2Q8WZ92 322 aa18.53■□□□□ 0.56
CLTA-208ENST00000493185 FIG4Q92562 907 aa18.53■□□□□ 0.56
CLTA-208ENST00000493185 STARD4Q96DR4 205 aa18.53■□□□□ 0.56
CLTA-208ENST00000493185 C3orf30Q96M34 536 aa18.53■□□□□ 0.56
CLTA-208ENST00000493185 TMEM109Q9BVC6 243 aa18.53■□□□□ 0.56
CLTA-208ENST00000493185 BTBD2Q9BX70 525 aa18.53■□□□□ 0.56
CLTA-208ENST00000493185 UBQLN4Q9NRR5 601 aa18.53■□□□□ 0.56
CLTA-208ENST00000493185 NDRG3Q9UGV2 375 aa18.53■□□□□ 0.56
CLTA-208ENST00000493185 SCDO00767 359 aa18.52■□□□□ 0.56
CLTA-208ENST00000493185 CASKO14936 926 aa18.52■□□□□ 0.56
CLTA-208ENST00000493185 TYROBPO43914 113 aa18.52■□□□□ 0.56
CLTA-208ENST00000493185 HMGN2P05204 90 aaKnown RBP18.52■□□□□ 0.56
CLTA-208ENST00000493185 FCGR2AP12318 317 aa18.52■□□□□ 0.56
CLTA-208ENST00000493185 POU6F2P78424 691 aaPredicted RBP18.52■□□□□ 0.56
CLTA-208ENST00000493185 FGFBP1Q14512 234 aa18.52■□□□□ 0.56
CLTA-208ENST00000493185 LASP1Q14847 261 aaKnown RBP18.52■□□□□ 0.56
CLTA-208ENST00000493185 PON3Q15166 354 aa18.52■□□□□ 0.56
CLTA-208ENST00000493185 TMEM44Q2T9K0 475 aa18.52■□□□□ 0.56
CLTA-208ENST00000493185 LSM12Q3MHD2 195 aaKnown RBP18.52■□□□□ 0.56
CLTA-208ENST00000493185 IL23RQ5VWK5 629 aa18.52■□□□□ 0.56
CLTA-208ENST00000493185 VWA1Q6PCB0 445 aa18.52■□□□□ 0.56
CLTA-208ENST00000493185 ZAR1Q86SH2 424 aa18.52■□□□□ 0.56
CLTA-208ENST00000493185 NUDCD3Q8IVD9 361 aa18.52■□□□□ 0.56
CLTA-208ENST00000493185 METTL25Q8N6Q8 603 aa18.52■□□□□ 0.56
CLTA-208ENST00000493185 FNDC9Q8TBE3 224 aa18.52■□□□□ 0.56
CLTA-208ENST00000493185 TUBGCP3Q96CW5 907 aa18.52■□□□□ 0.56
CLTA-208ENST00000493185 OTUB1Q96FW1 271 aaPredicted RBP18.52■□□□□ 0.56
CLTA-208ENST00000493185 STACQ99469 402 aa18.52■□□□□ 0.56
CLTA-208ENST00000493185 CXXC4Q9H2H0 198 aa18.52■□□□□ 0.56
CLTA-208ENST00000493185 RNF122Q9H9V4 155 aa18.52■□□□□ 0.56
CLTA-208ENST00000493185 DUSP22Q9NRW4 184 aa18.52■□□□□ 0.56
CLTA-208ENST00000493185 EIF3LQ9Y262 564 aaKnown RBP18.52■□□□□ 0.56
CLTA-208ENST00000493185 PRRC2AP48634 2157 aaKnown RBP18.52■□□□□ 0.56
CLTA-208ENST00000493185 ITPR3Q14573 2671 aa18.52■□□□□ 0.55
CLTA-208ENST00000493185 C2CD3Q4AC94 2353 aa18.51■□□□□ 0.55
CLTA-208ENST00000493185 SHISA8B8ZZ34 492 aa18.51■□□□□ 0.55
CLTA-208ENST00000493185 KRT16P08779 473 aa18.51■□□□□ 0.55
CLTA-208ENST00000493185 PRPS1L1P21108 318 aa18.51■□□□□ 0.55
CLTA-208ENST00000493185 ATP6V1C1P21283 382 aa18.51■□□□□ 0.55
CLTA-208ENST00000493185 ETV4P43268 484 aa18.51■□□□□ 0.55
CLTA-208ENST00000493185 CCT3P49368 545 aaKnown RBP18.51■□□□□ 0.55
CLTA-208ENST00000493185 ZNF41P51814 821 aaPredicted RBP18.51■□□□□ 0.55
CLTA-208ENST00000493185 SIRPAP78324 504 aa18.51■□□□□ 0.55
CLTA-208ENST00000493185 KRT71Q3SY84 523 aa18.51■□□□□ 0.55
CLTA-208ENST00000493185 SPDYE7PQ495Y7 208 aa18.51■□□□□ 0.55
CLTA-208ENST00000493185 EXOSC6Q5RKV6 272 aaKnown RBP18.51■□□□□ 0.55
CLTA-208ENST00000493185 CCNJQ5T5M9 372 aa18.51■□□□□ 0.55
CLTA-208ENST00000493185 PAMR1Q6UXH9 720 aa18.51■□□□□ 0.55
CLTA-208ENST00000493185 WDR75Q8IWA0 830 aaKnown RBP18.51■□□□□ 0.55
CLTA-208ENST00000493185 MREGQ8N565 214 aa18.51■□□□□ 0.55
CLTA-208ENST00000493185 OR56A1Q8NGH5 318 aa18.51■□□□□ 0.55
CLTA-208ENST00000493185 ACTRT2Q8TDY3 377 aa18.51■□□□□ 0.55
CLTA-208ENST00000493185 ZBTB8AQ96BR9 441 aa18.51■□□□□ 0.55
CLTA-208ENST00000493185 PGM2Q96G03 612 aa18.51■□□□□ 0.55
CLTA-208ENST00000493185 ZNF845Q96IR2 970 aaPredicted RBP18.51■□□□□ 0.55
CLTA-208ENST00000493185 PIGUQ9H490 435 aa18.51■□□□□ 0.55
CLTA-208ENST00000493185 GIN1Q9NXP7 522 aa18.51■□□□□ 0.55
CLTA-208ENST00000493185 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.51■□□□□ 0.55
CLTA-208ENST00000493185 FAF1Q9UNN5 650 aaPredicted RBP18.51■□□□□ 0.55
CLTA-208ENST00000493185 V9GYY5 206 aaPredicted RBP18.51■□□□□ 0.55
CLTA-208ENST00000493185 A0A1W2PQD3 144 aa18.5■□□□□ 0.55
CLTA-208ENST00000493185 EIF1AYO14602 144 aaKnown RBP18.5■□□□□ 0.55
CLTA-208ENST00000493185 CTIFO43310 598 aaKnown RBP18.5■□□□□ 0.55
CLTA-208ENST00000493185 SOX30O94993 753 aa18.5■□□□□ 0.55
CLTA-208ENST00000493185 KIR2DL2P43627 348 aaPredicted RBP18.5■□□□□ 0.55
CLTA-208ENST00000493185 EIF1AXP47813 144 aaKnown RBP18.5■□□□□ 0.55
CLTA-208ENST00000493185 PCYT1AP49585 367 aa18.5■□□□□ 0.55
CLTA-208ENST00000493185 MAD2L1Q13257 205 aaPredicted RBP18.5■□□□□ 0.55
CLTA-208ENST00000493185 TP53BP2Q13625 1128 aa18.5■□□□□ 0.55
CLTA-208ENST00000493185 PPP4R4Q6NUP7 873 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms