RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 C15orf38-AP3S2A0A0A6YYH1 394 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 PRAMEF27A3QJZ7 478 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 TMEM247A6NEH6 219 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 EVPLLA8MZ36 301 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 GTPBP1O00178 669 aaKnown RBP12.71□□□□□ -0.37
CCM2-217ENST00000492883 CCL21O00585 134 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 ADAM10O14672 748 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 BCKDKO14874 412 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 SNX3O60493 162 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 AGFG2O95081 481 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 H6PDO95479 791 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 ESRRAP11474 423 aaPredicted RBP12.71□□□□□ -0.37
CCM2-217ENST00000492883 TCEA1P23193 301 aaKnown RBP12.71□□□□□ -0.37
CCM2-217ENST00000492883 SRD5A2P31213 254 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 CA7P43166 264 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 RNF144AP50876 292 aaPredicted RBP12.71□□□□□ -0.37
CCM2-217ENST00000492883 MVDP53602 400 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 DSCR4P56555 118 aaPredicted RBP12.71□□□□□ -0.37
CCM2-217ENST00000492883 CHRNEQ04844 493 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 NFYCQ13952 458 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 RGNQ15493 299 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 GXYLT1Q4G148 440 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 C4orf17Q53FE4 359 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 KLHL26Q53HC5 615 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 PDZK1Q5T2W1 519 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 WLSQ5T9L3 541 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 TYW3Q6IPR3 259 aaKnown RBP12.71□□□□□ -0.37
CCM2-217ENST00000492883 Q6ZPB1 254 aaPredicted RBP12.71□□□□□ -0.37
CCM2-217ENST00000492883 FJX1Q86VR8 437 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 CHERPQ8IWX8 916 aaKnown RBP12.71□□□□□ -0.37
CCM2-217ENST00000492883 ZNF619Q8N2I2 560 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 FAM26EQ8N5C1 309 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 DPP10Q8N608 796 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 ANKFN1Q8N957 763 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 FADS6Q8N9I5 356 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 SH3YL1Q96HL8 342 aaPredicted RBP12.71□□□□□ -0.37
CCM2-217ENST00000492883 TRNT1Q96Q11 434 aaKnown RBP12.71□□□□□ -0.37
CCM2-217ENST00000492883 ALKBH4Q9NXW9 302 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 ARMCX1Q9P291 453 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 SPRR3Q9UBC9 169 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 P2RX2Q9UBL9 471 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 TINAGQ9UJW2 476 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 RPH3AQ9Y2J0 694 aaPredicted RBP12.71□□□□□ -0.37
CCM2-217ENST00000492883 DTNAQ9Y4J8 743 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 CAPN7Q9Y6W3 813 aa12.71□□□□□ -0.37
CCM2-217ENST00000492883 SMG1Q96Q15 3661 aaKnown RBP12.71□□□□□ -0.38
CCM2-217ENST00000492883 SPTA1P02549 2419 aa12.71□□□□□ -0.38
CCM2-217ENST00000492883 IGLV3-32A0A0A0MS00 114 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 SERINC4A6NH21 518 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 NPIPB9F8W1W9 429 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 HCRTR2O43614 444 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 SEMA7AO75326 666 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 UGT2B17O75795 530 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 GUSBP08236 651 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 HOXB9P17482 250 aaPredicted RBP12.7□□□□□ -0.38
CCM2-217ENST00000492883 HK1P19367 917 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 ENDOUP21128 410 aaKnown RBP12.7□□□□□ -0.38
CCM2-217ENST00000492883 MSX1P28360 303 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 FUT5Q11128 374 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 FADDQ13158 208 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 CYLC2Q14093 348 aaPredicted RBP12.7□□□□□ -0.38
CCM2-217ENST00000492883 CD226Q15762 336 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 ZNF141Q15928 474 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 ZNF630Q2M218 657 aaPredicted RBP12.7□□□□□ -0.38
CCM2-217ENST00000492883 ZNF585AQ6P3V2 769 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 DLEU7Q6UYE1 221 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 LRRC74BQ6ZQY2 392 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 MTERF4Q7Z6M4 381 aaKnown RBP12.7□□□□□ -0.38
CCM2-217ENST00000492883 DHDDSQ86SQ9 333 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 MTDHQ86UE4 582 aaKnown RBP12.7□□□□□ -0.38
CCM2-217ENST00000492883 CD163Q86VB7 1156 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 RETREG3Q86VR2 466 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 IFNEQ86WN2 208 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 SNX32Q86XE0 403 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 DOLPP1Q86YN1 238 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 MSRB3Q8IXL7 192 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 OR5M9Q8NGP3 310 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 B4GALNT2Q8NHY0 566 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 RELTQ969Z4 430 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 OR2B2Q9GZK3 357 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 SAP130Q9H0E3 1048 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 MTHFD2LQ9H903 347 aaPredicted RBP12.7□□□□□ -0.38
CCM2-217ENST00000492883 CALML5Q9NZT1 146 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 CORO2BQ9UQ03 480 aa12.7□□□□□ -0.38
CCM2-217ENST00000492883 MRPS18CQ9Y3D5 142 aaKnown RBP12.7□□□□□ -0.38
CCM2-217ENST00000492883 B4DXG7 233 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 FAM47E-STBD1D6RA91 191 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 SLC22A2O15244 555 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 KIAA0513O60268 411 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 ZIC3O60481 467 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 CYP7B1O75881 506 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 ZIC2O95409 532 aaPredicted RBP12.69□□□□□ -0.38
CCM2-217ENST00000492883 NUDT14O95848 222 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 BCHEP06276 602 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 CHRM4P08173 479 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 NUDT7P0C024 238 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 TFPTP0C1Z6 253 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 BMP7P18075 431 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 CRISP3P54108 245 aa12.69□□□□□ -0.38
CCM2-217ENST00000492883 PER3P56645 1201 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms