RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 ATE1O95260 518 aa15.53■□□□□ 0.08
SGMS1-204ENST00000492601 OXSR1O95747 527 aaPredicted RBP15.53■□□□□ 0.08
SGMS1-204ENST00000492601 RAF1P04049 648 aa15.53■□□□□ 0.08
SGMS1-204ENST00000492601 ALOX5P09917 674 aa15.53■□□□□ 0.08
SGMS1-204ENST00000492601 NUDT17P0C025 328 aa15.53■□□□□ 0.08
SGMS1-204ENST00000492601 KLK2P20151 261 aa15.53■□□□□ 0.08
SGMS1-204ENST00000492601 KIR2DL2P43627 348 aaPredicted RBP15.53■□□□□ 0.08
SGMS1-204ENST00000492601 RPS3AP61247 264 aaKnown RBP15.53■□□□□ 0.08
SGMS1-204ENST00000492601 VSNL1P62760 191 aa15.53■□□□□ 0.08
SGMS1-204ENST00000492601 PPP2R2AP63151 447 aa15.53■□□□□ 0.08
SGMS1-204ENST00000492601 GLYR1Q49A26 553 aaPredicted RBP15.53■□□□□ 0.08
SGMS1-204ENST00000492601 MFSD12Q6NUT3 480 aa15.53■□□□□ 0.08
SGMS1-204ENST00000492601 R3HCC1LQ7Z5L2 792 aaKnown RBP15.53■□□□□ 0.08
SGMS1-204ENST00000492601 RIBC1Q8N443 379 aaPredicted RBP15.53■□□□□ 0.08
SGMS1-204ENST00000492601 COX18Q8N8Q8 333 aa15.53■□□□□ 0.08
SGMS1-204ENST00000492601 OR7A2PQ8NGA2 310 aa15.53■□□□□ 0.08
SGMS1-204ENST00000492601 FAM120BQ96EK7 910 aaKnown RBP15.53■□□□□ 0.08
SGMS1-204ENST00000492601 CHMP6Q96FZ7 201 aa15.53■□□□□ 0.08
SGMS1-204ENST00000492601 ALPK1Q96QP1 1244 aa15.53■□□□□ 0.08
SGMS1-204ENST00000492601 C1orf50Q9BV19 199 aa15.53■□□□□ 0.08
SGMS1-204ENST00000492601 NDRG3Q9UGV2 375 aa15.53■□□□□ 0.08
SGMS1-204ENST00000492601 LGALS13Q9UHV8 139 aa15.53■□□□□ 0.08
SGMS1-204ENST00000492601 AP4B1Q9Y6B7 739 aa15.53■□□□□ 0.08
SGMS1-204ENST00000492601 ALG1L2C9J202 215 aa15.52■□□□□ 0.08
SGMS1-204ENST00000492601 EIF1AYO14602 144 aaKnown RBP15.52■□□□□ 0.08
SGMS1-204ENST00000492601 SCAMP2O15127 329 aaKnown RBP15.52■□□□□ 0.08
SGMS1-204ENST00000492601 SLU7O95391 586 aaKnown RBP15.52■□□□□ 0.08
SGMS1-204ENST00000492601 OPN1LWP04000 364 aa15.52■□□□□ 0.08
SGMS1-204ENST00000492601 TBXA2RP21731 343 aa15.52■□□□□ 0.08
SGMS1-204ENST00000492601 ARRB2P32121 409 aa15.52■□□□□ 0.08
SGMS1-204ENST00000492601 HPCAL1P37235 193 aa15.52■□□□□ 0.08
SGMS1-204ENST00000492601 CD79BP40259 229 aa15.52■□□□□ 0.08
SGMS1-204ENST00000492601 PTGR1Q14914 329 aa15.52■□□□□ 0.08
SGMS1-204ENST00000492601 SGCBQ16585 318 aa15.52■□□□□ 0.08
SGMS1-204ENST00000492601 TMEM44Q2T9K0 475 aa15.52■□□□□ 0.08
SGMS1-204ENST00000492601 CCNJQ5T5M9 372 aa15.52■□□□□ 0.08
SGMS1-204ENST00000492601 ZNF474Q6S9Z5 364 aaPredicted RBP15.52■□□□□ 0.08
SGMS1-204ENST00000492601 CAMKMTQ7Z624 323 aa15.52■□□□□ 0.08
SGMS1-204ENST00000492601 METTL25Q8N6Q8 603 aa15.52■□□□□ 0.08
SGMS1-204ENST00000492601 OR6Y1Q8NGX8 325 aa15.52■□□□□ 0.08
SGMS1-204ENST00000492601 FAM110BQ8TC76 370 aa15.52■□□□□ 0.08
SGMS1-204ENST00000492601 NUDT8Q8WV74 236 aa15.52■□□□□ 0.08
SGMS1-204ENST00000492601 MBD6Q96DN6 1003 aa15.52■□□□□ 0.08
SGMS1-204ENST00000492601 MTERF3Q96E29 417 aa15.52■□□□□ 0.08
SGMS1-204ENST00000492601 SH3YL1Q96HL8 342 aaPredicted RBP15.52■□□□□ 0.08
SGMS1-204ENST00000492601 PPP3R2Q96LZ3 170 aa15.52■□□□□ 0.08
SGMS1-204ENST00000492601 C3orf30Q96M34 536 aa15.52■□□□□ 0.08
SGMS1-204ENST00000492601 NPAS1Q99742 590 aa15.52■□□□□ 0.08
SGMS1-204ENST00000492601 RNF122Q9H9V4 155 aa15.52■□□□□ 0.08
SGMS1-204ENST00000492601 SIRT3Q9NTG7 399 aaPredicted RBP15.52■□□□□ 0.08
SGMS1-204ENST00000492601 ZCCHC3Q9NUD5 404 aaKnown RBP15.52■□□□□ 0.08
SGMS1-204ENST00000492601 KLHL28Q9NXS3 571 aa15.52■□□□□ 0.08
SGMS1-204ENST00000492601 ATP6V1HQ9UI12 483 aa15.52■□□□□ 0.08
SGMS1-204ENST00000492601 ZNF175Q9Y473 711 aa15.52■□□□□ 0.08
SGMS1-204ENST00000492601 TESMINQ9Y4I5 508 aa15.52■□□□□ 0.08
SGMS1-204ENST00000492601 SNX8Q9Y5X2 465 aa15.52■□□□□ 0.08
SGMS1-204ENST00000492601 TMEM114B3SHH9 223 aa15.51■□□□□ 0.07
SGMS1-204ENST00000492601 SKAP2O75563 359 aaPredicted RBP15.51■□□□□ 0.07
SGMS1-204ENST00000492601 AQP8O94778 261 aa15.51■□□□□ 0.07
SGMS1-204ENST00000492601 GOSR1O95249 250 aa15.51■□□□□ 0.07
SGMS1-204ENST00000492601 HMGN2P05204 90 aaKnown RBP15.51■□□□□ 0.07
SGMS1-204ENST00000492601 LAMP1P11279 417 aa15.51■□□□□ 0.07
SGMS1-204ENST00000492601 HPGDP15428 266 aa15.51■□□□□ 0.07
SGMS1-204ENST00000492601 CREB1P16220 341 aa15.51■□□□□ 0.07
SGMS1-204ENST00000492601 MAPK1P28482 360 aa15.51■□□□□ 0.07
SGMS1-204ENST00000492601 EIF1AXP47813 144 aaKnown RBP15.51■□□□□ 0.07
SGMS1-204ENST00000492601 KCNJ5P48544 419 aa15.51■□□□□ 0.07
SGMS1-204ENST00000492601 PRIM2P49643 509 aa15.51■□□□□ 0.07
SGMS1-204ENST00000492601 FOXD4Q12950 439 aaPredicted RBP15.51■□□□□ 0.07
SGMS1-204ENST00000492601 LASP1Q14847 261 aaKnown RBP15.51■□□□□ 0.07
SGMS1-204ENST00000492601 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.51■□□□□ 0.07
SGMS1-204ENST00000492601 DEFB113Q30KQ7 82 aa15.51■□□□□ 0.07
SGMS1-204ENST00000492601 XKR7Q5GH72 579 aa15.51■□□□□ 0.07
SGMS1-204ENST00000492601 LRIG3Q6UXM1 1119 aa15.51■□□□□ 0.07
SGMS1-204ENST00000492601 GGNQ86UU5 652 aa15.51■□□□□ 0.07
SGMS1-204ENST00000492601 CDS1Q92903 461 aa15.51■□□□□ 0.07
SGMS1-204ENST00000492601 WFIKKN1Q96NZ8 548 aa15.51■□□□□ 0.07
SGMS1-204ENST00000492601 KLHDC3Q9BQ90 382 aa15.51■□□□□ 0.07
SGMS1-204ENST00000492601 C6orf203Q9P0P8 240 aaPredicted RBP15.51■□□□□ 0.07
SGMS1-204ENST00000492601 EIF3LQ9Y262 564 aaKnown RBP15.51■□□□□ 0.07
SGMS1-204ENST00000492601 A0A1W2PRB8 838 aa15.5■□□□□ 0.07
SGMS1-204ENST00000492601 CGAP01215 116 aa15.5■□□□□ 0.07
SGMS1-204ENST00000492601 NGFRP08138 427 aa15.5■□□□□ 0.07
SGMS1-204ENST00000492601 POU2F1P14859 743 aa15.5■□□□□ 0.07
SGMS1-204ENST00000492601 SLC6A8P48029 635 aa15.5■□□□□ 0.07
SGMS1-204ENST00000492601 SERPINB4P48594 390 aa15.5■□□□□ 0.07
SGMS1-204ENST00000492601 RNF144AP50876 292 aaPredicted RBP15.5■□□□□ 0.07
SGMS1-204ENST00000492601 ADAM8P78325 824 aa15.5■□□□□ 0.07
SGMS1-204ENST00000492601 POU6F2P78424 691 aaPredicted RBP15.5■□□□□ 0.07
SGMS1-204ENST00000492601 ATP6AP1LQ52LC2 224 aa15.5■□□□□ 0.07
SGMS1-204ENST00000492601 C6orf136Q5SQH8 315 aa15.5■□□□□ 0.07
SGMS1-204ENST00000492601 IL23RQ5VWK5 629 aa15.5■□□□□ 0.07
SGMS1-204ENST00000492601 ZCCHC12Q6PEW1 402 aa15.5■□□□□ 0.07
SGMS1-204ENST00000492601 KRTCAP2Q8N6L1 136 aa15.5■□□□□ 0.07
SGMS1-204ENST00000492601 ZNF610Q8N9Z0 462 aa15.5■□□□□ 0.07
SGMS1-204ENST00000492601 MED18Q9BUE0 208 aa15.5■□□□□ 0.07
SGMS1-204ENST00000492601 BTBD2Q9BX70 525 aa15.5■□□□□ 0.07
SGMS1-204ENST00000492601 PRRG4Q9BZD6 226 aa15.5■□□□□ 0.07
SGMS1-204ENST00000492601 TMEM185BQ9H7F4 350 aa15.5■□□□□ 0.07
SGMS1-204ENST00000492601 UBQLN4Q9NRR5 601 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms