RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 LRTM1Q9HBL6 345 aa12.93□□□□□ -0.34
SSR4-212ENST00000491833 GLRX2Q9NS18 164 aa12.93□□□□□ -0.34
SSR4-212ENST00000491833 FAM120CQ9NX05 1096 aaKnown RBP12.93□□□□□ -0.34
SSR4-212ENST00000491833 MCM8Q9UJA3 840 aa12.93□□□□□ -0.34
SSR4-212ENST00000491833 GRID1Q9ULK0 1009 aa12.93□□□□□ -0.34
SSR4-212ENST00000491833 LIPT1Q9Y234 373 aa12.93□□□□□ -0.34
SSR4-212ENST00000491833 SNX8Q9Y5X2 465 aa12.93□□□□□ -0.34
SSR4-212ENST00000491833 ABCA1O95477 2261 aa12.92□□□□□ -0.34
SSR4-212ENST00000491833 SHISA8B8ZZ34 492 aa12.92□□□□□ -0.34
SSR4-212ENST00000491833 ADAM11O75078 769 aa12.92□□□□□ -0.34
SSR4-212ENST00000491833 SYNGR4O95473 234 aa12.92□□□□□ -0.34
SSR4-212ENST00000491833 OTCP00480 354 aa12.92□□□□□ -0.34
SSR4-212ENST00000491833 IGHV4-39P01824 125 aa12.92□□□□□ -0.34
SSR4-212ENST00000491833 CD3EP07766 207 aa12.92□□□□□ -0.34
SSR4-212ENST00000491833 FAM157CP0CG43 387 aa12.92□□□□□ -0.34
SSR4-212ENST00000491833 ZNF17P17021 662 aa12.92□□□□□ -0.34
SSR4-212ENST00000491833 DECR1Q16698 335 aa12.92□□□□□ -0.34
SSR4-212ENST00000491833 CTU2Q2VPK5 515 aaKnown RBP12.92□□□□□ -0.34
SSR4-212ENST00000491833 CYP27C1Q4G0S4 372 aa12.92□□□□□ -0.34
SSR4-212ENST00000491833 OR10D3Q8NH80 312 aa12.92□□□□□ -0.34
SSR4-212ENST00000491833 LILRB1Q8NHL6 650 aaPredicted RBP12.92□□□□□ -0.34
SSR4-212ENST00000491833 DUSP19Q8WTR2 217 aa12.92□□□□□ -0.34
SSR4-212ENST00000491833 SMAP2Q8WU79 429 aaPredicted RBP12.92□□□□□ -0.34
SSR4-212ENST00000491833 S100PBPQ96BU1 408 aa12.92□□□□□ -0.34
SSR4-212ENST00000491833 HS6ST2Q96MM7 605 aa12.92□□□□□ -0.34
SSR4-212ENST00000491833 HBEGFQ99075 208 aa12.92□□□□□ -0.34
SSR4-212ENST00000491833 SHCBP1LQ9BZQ2 653 aa12.92□□□□□ -0.34
SSR4-212ENST00000491833 RTN4RQ9BZR6 473 aa12.92□□□□□ -0.34
SSR4-212ENST00000491833 ALG2Q9H553 416 aa12.92□□□□□ -0.34
SSR4-212ENST00000491833 ESRP2Q9H6T0 727 aaKnown RBP12.92□□□□□ -0.34
SSR4-212ENST00000491833 BARX1Q9HBU1 254 aaPredicted RBP12.92□□□□□ -0.34
SSR4-212ENST00000491833 Q9N2J8 555 aa12.92□□□□□ -0.34
SSR4-212ENST00000491833 NGBQ9NPG2 151 aa12.92□□□□□ -0.34
SSR4-212ENST00000491833 FLRT3Q9NZU0 649 aa12.92□□□□□ -0.34
SSR4-212ENST00000491833 VPS29Q9UBQ0 182 aa12.92□□□□□ -0.34
SSR4-212ENST00000491833 MRTO4Q9UKD2 239 aaKnown RBP12.92□□□□□ -0.34
SSR4-212ENST00000491833 CDC42EP3Q9UKI2 254 aa12.92□□□□□ -0.34
SSR4-212ENST00000491833 VDAC3Q9Y277 283 aa12.92□□□□□ -0.34
SSR4-212ENST00000491833 GNG14A0A1W2PPG7 69 aa12.91□□□□□ -0.34
SSR4-212ENST00000491833 GMFGO60234 142 aa12.91□□□□□ -0.34
SSR4-212ENST00000491833 PCDH7O60245 1069 aa12.91□□□□□ -0.34
SSR4-212ENST00000491833 SPAG7O75391 227 aa12.91□□□□□ -0.34
SSR4-212ENST00000491833 RPS17P08708 135 aaKnown RBP12.91□□□□□ -0.34
SSR4-212ENST00000491833 HSD3B1P14060 373 aa12.91□□□□□ -0.34
SSR4-212ENST00000491833 HSD3B2P26439 372 aa12.91□□□□□ -0.34
SSR4-212ENST00000491833 AGTR1P30556 359 aa12.91□□□□□ -0.34
SSR4-212ENST00000491833 CRHR1P34998 444 aa12.91□□□□□ -0.34
SSR4-212ENST00000491833 PSMD4P55036 377 aaKnown RBP12.91□□□□□ -0.34
SSR4-212ENST00000491833 FAPQ12884 760 aa12.91□□□□□ -0.34
SSR4-212ENST00000491833 HEPACAMQ14CZ8 416 aa12.91□□□□□ -0.34
SSR4-212ENST00000491833 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.91□□□□□ -0.34
SSR4-212ENST00000491833 TMEM44Q2T9K0 475 aa12.91□□□□□ -0.34
SSR4-212ENST00000491833 ZNF672Q499Z4 452 aaPredicted RBP12.91□□□□□ -0.34
SSR4-212ENST00000491833 NCMAPQ5T1S8 102 aa12.91□□□□□ -0.34
SSR4-212ENST00000491833 C6orf52Q5T4I8 152 aa12.91□□□□□ -0.34
SSR4-212ENST00000491833 LETMD1Q6P1Q0 360 aa12.91□□□□□ -0.34
SSR4-212ENST00000491833 DNM1P46Q6ZS02 220 aa12.91□□□□□ -0.34
SSR4-212ENST00000491833 RPS27LQ71UM5 84 aaKnown RBP12.91□□□□□ -0.34
SSR4-212ENST00000491833 MARCH3Q86UD3 253 aa12.91□□□□□ -0.34
SSR4-212ENST00000491833 SLC22A9Q8IVM8 553 aa12.91□□□□□ -0.34
SSR4-212ENST00000491833 CCDC126Q96EE4 140 aa12.91□□□□□ -0.34
SSR4-212ENST00000491833 TBL1XR1Q9BZK7 514 aa12.91□□□□□ -0.34
SSR4-212ENST00000491833 C12orf49Q9H741 205 aa12.91□□□□□ -0.34
SSR4-212ENST00000491833 SLC35C2Q9NQQ7 365 aa12.91□□□□□ -0.34
SSR4-212ENST00000491833 TMEM216Q9P0N5 145 aa12.91□□□□□ -0.34
SSR4-212ENST00000491833 CXCL13O43927 109 aa12.9□□□□□ -0.34
SSR4-212ENST00000491833 SLITRK5O94991 958 aa12.9□□□□□ -0.34
SSR4-212ENST00000491833 ANGPTL1O95841 491 aa12.9□□□□□ -0.34
SSR4-212ENST00000491833 THBS1P07996 1170 aa12.9□□□□□ -0.34
SSR4-212ENST00000491833 ATP5F1P24539 256 aaPredicted RBP12.9□□□□□ -0.34
SSR4-212ENST00000491833 MPIP34949 423 aa12.9□□□□□ -0.34
SSR4-212ENST00000491833 RFX3P48380 749 aa12.9□□□□□ -0.34
SSR4-212ENST00000491833 C17orf67Q0P5P2 114 aa12.9□□□□□ -0.34
SSR4-212ENST00000491833 CSTF3Q12996 717 aaKnown RBP12.9□□□□□ -0.34
SSR4-212ENST00000491833 ZNHIT3Q15649 155 aaPredicted RBP12.9□□□□□ -0.34
SSR4-212ENST00000491833 FIGNL1Q6PIW4 674 aa12.9□□□□□ -0.34
SSR4-212ENST00000491833 GALNT10Q86SR1 603 aa12.9□□□□□ -0.34
SSR4-212ENST00000491833 WDR75Q8IWA0 830 aaKnown RBP12.9□□□□□ -0.34
SSR4-212ENST00000491833 KBTBD8Q8NFY9 601 aa12.9□□□□□ -0.34
SSR4-212ENST00000491833 NEUROG1Q92886 237 aa12.9□□□□□ -0.34
SSR4-212ENST00000491833 ADGRG7Q96K78 797 aa12.9□□□□□ -0.34
SSR4-212ENST00000491833 PKNOX2Q96KN3 472 aa12.9□□□□□ -0.34
SSR4-212ENST00000491833 BBS4Q96RK4 519 aa12.9□□□□□ -0.34
SSR4-212ENST00000491833 AMBRA1Q9C0C7 1298 aa12.9□□□□□ -0.34
SSR4-212ENST00000491833 VIPAS39Q9H9C1 493 aa12.9□□□□□ -0.34
SSR4-212ENST00000491833 KCNK9Q9NPC2 374 aa12.9□□□□□ -0.34
SSR4-212ENST00000491833 MKS1Q9NXB0 559 aa12.9□□□□□ -0.34
SSR4-212ENST00000491833 A0A087WV62 115 aa12.89□□□□□ -0.35
SSR4-212ENST00000491833 IGLV3-32A0A0A0MS00 114 aa12.89□□□□□ -0.35
SSR4-212ENST00000491833 A8MT66 165 aa12.89□□□□□ -0.35
SSR4-212ENST00000491833 HAX1O00165 279 aa12.89□□□□□ -0.35
SSR4-212ENST00000491833 DLX3O60479 287 aa12.89□□□□□ -0.35
SSR4-212ENST00000491833 NDUFS7O75251 213 aa12.89□□□□□ -0.35
SSR4-212ENST00000491833 GCM2O75603 506 aaPredicted RBP12.89□□□□□ -0.35
SSR4-212ENST00000491833 IL33O95760 270 aa12.89□□□□□ -0.35
SSR4-212ENST00000491833 FESP07332 822 aa12.89□□□□□ -0.35
SSR4-212ENST00000491833 NEFHP12036 1026 aa12.89□□□□□ -0.35
SSR4-212ENST00000491833 IL32P24001 234 aa12.89□□□□□ -0.35
SSR4-212ENST00000491833 SLC18A2Q05940 514 aa12.89□□□□□ -0.35
SSR4-212ENST00000491833 NRF1Q16656 503 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms