RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 ALOX5P09917 674 aa16.53■□□□□ 0.24
SMIM4-205ENST00000491607 BCKDHAP12694 445 aa16.53■□□□□ 0.24
SMIM4-205ENST00000491607 UGT2B10P36537 528 aa16.53■□□□□ 0.24
SMIM4-205ENST00000491607 HPCAL1P37235 193 aa16.53■□□□□ 0.24
SMIM4-205ENST00000491607 MAP3K8P41279 467 aa16.53■□□□□ 0.24
SMIM4-205ENST00000491607 FRKP42685 505 aaPredicted RBP16.53■□□□□ 0.24
SMIM4-205ENST00000491607 FGFBP1Q14512 234 aa16.53■□□□□ 0.24
SMIM4-205ENST00000491607 DUSP5Q16690 384 aa16.53■□□□□ 0.24
SMIM4-205ENST00000491607 ARL13AQ5H913 290 aaPredicted RBP16.53■□□□□ 0.24
SMIM4-205ENST00000491607 R3HCC1LQ7Z5L2 792 aaKnown RBP16.53■□□□□ 0.24
SMIM4-205ENST00000491607 GGNQ86UU5 652 aa16.53■□□□□ 0.24
SMIM4-205ENST00000491607 ZNF610Q8N9Z0 462 aa16.53■□□□□ 0.24
SMIM4-205ENST00000491607 WFDC11Q8NEX6 87 aa16.53■□□□□ 0.24
SMIM4-205ENST00000491607 HOXB13Q92826 284 aaPredicted RBP16.53■□□□□ 0.24
SMIM4-205ENST00000491607 MTERF3Q96E29 417 aa16.53■□□□□ 0.24
SMIM4-205ENST00000491607 C16orf58Q96GQ5 468 aa16.53■□□□□ 0.24
SMIM4-205ENST00000491607 SH3YL1Q96HL8 342 aaPredicted RBP16.53■□□□□ 0.24
SMIM4-205ENST00000491607 TMEM114B3SHH9 223 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 SCDO00767 359 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 CTIFO43310 598 aaKnown RBP16.52■□□□□ 0.24
SMIM4-205ENST00000491607 NPHS1O60500 1241 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 AQP8O94778 261 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 PLGP00747 810 aaPredicted RBP16.52■□□□□ 0.24
SMIM4-205ENST00000491607 CGAP01215 116 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 FGF4P08620 206 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 CD8BP10966 210 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 ZNF17P17021 662 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 DDX5P17844 614 aaKnown RBP16.52■□□□□ 0.24
SMIM4-205ENST00000491607 CD53P19397 219 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 TBXA2RP21731 343 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 SERPINB4P48594 390 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 PRIM2P49643 509 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 ZNF41P51814 821 aaPredicted RBP16.52■□□□□ 0.24
SMIM4-205ENST00000491607 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.52■□□□□ 0.24
SMIM4-205ENST00000491607 EXOC3L2Q2M3D2 409 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 TMEM44Q2T9K0 475 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 CCNJQ5T5M9 372 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 FAM214BQ7L5A3 538 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 ZNF550Q7Z398 422 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 ZAR1Q86SH2 424 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 WDR75Q8IWA0 830 aaKnown RBP16.52■□□□□ 0.24
SMIM4-205ENST00000491607 BANPQ8N9N5 519 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 OR6Y1Q8NGX8 325 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.52■□□□□ 0.24
SMIM4-205ENST00000491607 PIK3IP1Q96FE7 263 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 ZC3HAV1LQ96H79 300 aaKnown RBP16.52■□□□□ 0.24
SMIM4-205ENST00000491607 HHATLQ9HCP6 504 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 ZCCHC3Q9NUD5 404 aaKnown RBP16.52■□□□□ 0.24
SMIM4-205ENST00000491607 FBXO34Q9NWN3 711 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 MKS1Q9NXB0 559 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 NTMQ9P121 344 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 SLC17A7Q9P2U7 560 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 GIMAP2Q9UG22 337 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 SNX8Q9Y5X2 465 aa16.52■□□□□ 0.24
SMIM4-205ENST00000491607 NF1P21359 2839 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 MED12LQ86YW9 2145 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 A0A087WZY1 265 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 C16orf97H3BN30 126 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 PEX11AO75192 247 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 SPAG7O75391 227 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 OPN1LWP04000 364 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 NGFRP08138 427 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 MAPK1P28482 360 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 CCKARP32238 428 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 PCYT1AP49585 367 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 OCRLQ01968 901 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 IFFO1Q0D2I5 559 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 ZCCHC12Q6PEW1 402 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 LRIG3Q6UXM1 1119 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 ZCCHC23Q6ZST2 131 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 TRABD2AQ86V40 505 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 HOMEZQ8IX15 550 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 RIBC1Q8N443 379 aaPredicted RBP16.51■□□□□ 0.23
SMIM4-205ENST00000491607 OR10D3Q8NH80 312 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 FAM110BQ8TC76 370 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 ZBTB8AQ96BR9 441 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 FAM120BQ96EK7 910 aaKnown RBP16.51■□□□□ 0.23
SMIM4-205ENST00000491607 PPP3R2Q96LZ3 170 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 RNF145Q96MT1 663 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 KLHL4Q9C0H6 718 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 GSX1Q9H4S2 264 aaPredicted RBP16.51■□□□□ 0.23
SMIM4-205ENST00000491607 DLL4Q9NR61 685 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 UBQLN4Q9NRR5 601 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 BEX4Q9NWD9 120 aaPredicted RBP16.51■□□□□ 0.23
SMIM4-205ENST00000491607 MCTS1Q9ULC4 181 aaKnown RBP16.51■□□□□ 0.23
SMIM4-205ENST00000491607 CLEC4AQ9UMR7 237 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 EMC9Q9Y3B6 208 aa16.51■□□□□ 0.23
SMIM4-205ENST00000491607 SETD2Q9BYW2 2564 aaPredicted RBP16.5■□□□□ 0.23
SMIM4-205ENST00000491607 VPS13CQ709C8 3753 aa16.5■□□□□ 0.23
SMIM4-205ENST00000491607 AKAP6Q13023 2319 aa16.5■□□□□ 0.23
SMIM4-205ENST00000491607 A0A1W2PRB8 838 aa16.5■□□□□ 0.23
SMIM4-205ENST00000491607 DEFB108AA8MXU0 73 aa16.5■□□□□ 0.23
SMIM4-205ENST00000491607 SCAMP2O15127 329 aaKnown RBP16.5■□□□□ 0.23
SMIM4-205ENST00000491607 HMGN2P05204 90 aaKnown RBP16.5■□□□□ 0.23
SMIM4-205ENST00000491607 FOSL1P15407 271 aa16.5■□□□□ 0.23
SMIM4-205ENST00000491607 RPL3P39023 403 aaKnown RBP16.5■□□□□ 0.23
SMIM4-205ENST00000491607 SLC6A8P48029 635 aa16.5■□□□□ 0.23
SMIM4-205ENST00000491607 POU6F2P78424 691 aaPredicted RBP16.5■□□□□ 0.23
SMIM4-205ENST00000491607 LASP1Q14847 261 aaKnown RBP16.5■□□□□ 0.23
SMIM4-205ENST00000491607 UGT3A2Q3SY77 523 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms