RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 ASB4Q9Y574 426 aa21.17■□□□□ 0.98
USF3-203ENST00000491165 MAU2Q9Y6X3 613 aa21.17■□□□□ 0.98
USF3-203ENST00000491165 SPTBN4Q9H254 2564 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 TRBV4-1A0A0J9YWV2 114 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 DCDC2BA2VCK2 349 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 FAM227AF5H4B4 570 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 COQ9O75208 318 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 BCHEP06276 602 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 ZNF28P17035 718 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 ALAS2P22557 587 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 TSFMP43897 325 aaKnown RBP21.16■□□□□ 0.98
USF3-203ENST00000491165 ARFIP1P53367 373 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 DEFA1P59665 94 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 DEFA3P59666 94 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 MAT1AQ00266 395 aaKnown RBP21.16■□□□□ 0.98
USF3-203ENST00000491165 MC2RQ01718 297 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 PPP1R3BQ86XI6 285 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 NEURL3Q96EH8 262 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 LIN37Q96GY3 246 aaPredicted RBP21.16■□□□□ 0.98
USF3-203ENST00000491165 TRNT1Q96Q11 434 aaKnown RBP21.16■□□□□ 0.98
USF3-203ENST00000491165 TAPBPLQ9BX59 468 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 UCK2Q9BZX2 261 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 A4GALTQ9NPC4 353 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 FBXW2Q9UKT8 454 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 AKAP13Q12802 2813 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 CFAP47Q6ZTR5 3102 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 LOC110117498-PIK3R3F6TDL0 507 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 POLR1CO15160 346 aaPredicted RBP21.16■□□□□ 0.98
USF3-203ENST00000491165 FGF5P12034 268 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 OSMP13725 252 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 RPS26P62854 115 aaKnown RBP21.16■□□□□ 0.98
USF3-203ENST00000491165 TARDBPQ13148 414 aaKnown RBP eCLIP21.16■□□□□ 0.98
USF3-203ENST00000491165 SSX1Q16384 188 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 GARNL3Q5VVW2 1013 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 SAXO2Q658L1 398 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 DESI1Q6ICB0 168 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 FAM180BQ6P0A1 224 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 HORMAD2Q8N7B1 307 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 SLC38A5Q8WUX1 472 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 PIK3R3Q92569 461 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 DEPDC7Q96QD5 511 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 SLC25A19Q9HC21 320 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 KCMF1Q9P0J7 381 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 C5AR2Q9P296 337 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 CAB39Q9Y376 341 aaPredicted RBP21.16■□□□□ 0.98
USF3-203ENST00000491165 LAMA5O15230 3695 aa21.16■□□□□ 0.98
USF3-203ENST00000491165 CCDC88CQ9P219 2028 aa21.15■□□□□ 0.98
USF3-203ENST00000491165 ENTPD6O75354 484 aa21.15■□□□□ 0.98
USF3-203ENST00000491165 SCRG1O75711 98 aa21.15■□□□□ 0.98
USF3-203ENST00000491165 DDCP20711 480 aa21.15■□□□□ 0.98
USF3-203ENST00000491165 OR1D4P47884 311 aa21.15■□□□□ 0.98
USF3-203ENST00000491165 SNRPGP62308 76 aaKnown RBP21.15■□□□□ 0.98
USF3-203ENST00000491165 C1orf189Q5VU69 101 aa21.15■□□□□ 0.98
USF3-203ENST00000491165 C18orf63Q68DL7 685 aa21.15■□□□□ 0.98
USF3-203ENST00000491165 TNFAIP8L2Q6P589 184 aaPredicted RBP21.15■□□□□ 0.98
USF3-203ENST00000491165 CCDC190Q86UF4 302 aa21.15■□□□□ 0.98
USF3-203ENST00000491165 CLIP4Q8N3C7 705 aa21.15■□□□□ 0.98
USF3-203ENST00000491165 SLC35B4Q969S0 331 aa21.15■□□□□ 0.98
USF3-203ENST00000491165 IL4I1Q96RQ9 567 aa21.15■□□□□ 0.98
USF3-203ENST00000491165 SERINC2Q96SA4 455 aa21.15■□□□□ 0.98
USF3-203ENST00000491165 STRADBQ9C0K7 418 aa21.15■□□□□ 0.98
USF3-203ENST00000491165 EHD3Q9NZN3 535 aa21.15■□□□□ 0.98
USF3-203ENST00000491165 DAPP1Q9UN19 280 aa21.15■□□□□ 0.98
USF3-203ENST00000491165 ASNA1O43681 348 aa21.14■□□□□ 0.98
USF3-203ENST00000491165 RHAGQ02094 409 aa21.14■□□□□ 0.98
USF3-203ENST00000491165 TGM3Q08188 693 aa21.14■□□□□ 0.98
USF3-203ENST00000491165 SLC9A5Q14940 896 aa21.14■□□□□ 0.98
USF3-203ENST00000491165 CARTPTQ16568 116 aa21.14■□□□□ 0.98
USF3-203ENST00000491165 OR5P2Q8WZ92 322 aa21.14■□□□□ 0.98
USF3-203ENST00000491165 MMABQ96EY8 250 aaPredicted RBP21.14■□□□□ 0.98
USF3-203ENST00000491165 CEP19Q96LK0 163 aa21.14■□□□□ 0.98
USF3-203ENST00000491165 OPALINQ96PE5 141 aa21.14■□□□□ 0.98
USF3-203ENST00000491165 CRNNQ9UBG3 495 aaPredicted RBP21.14■□□□□ 0.98
USF3-203ENST00000491165 REV1Q9UBZ9 1251 aa21.14■□□□□ 0.98
USF3-203ENST00000491165 MGAT4BQ9UQ53 548 aa21.14■□□□□ 0.98
USF3-203ENST00000491165 B3GALT1Q9Y5Z6 326 aa21.14■□□□□ 0.98
USF3-203ENST00000491165 A0A1W2PR48 441 aa21.14■□□□□ 0.97
USF3-203ENST00000491165 NSA2O95478 260 aaKnown RBP21.14■□□□□ 0.97
USF3-203ENST00000491165 SCG5P05408 212 aa21.14■□□□□ 0.97
USF3-203ENST00000491165 MANFP55145 182 aaKnown RBP21.14■□□□□ 0.97
USF3-203ENST00000491165 TP53BP2Q13625 1128 aa21.14■□□□□ 0.97
USF3-203ENST00000491165 IL11RAQ14626 422 aa21.14■□□□□ 0.97
USF3-203ENST00000491165 NDUFA9Q16795 377 aa21.14■□□□□ 0.97
USF3-203ENST00000491165 FAM214AQ32MH5 1076 aa21.14■□□□□ 0.97
USF3-203ENST00000491165 C3orf38Q5JPI3 329 aa21.14■□□□□ 0.97
USF3-203ENST00000491165 MEDAGQ5VYS4 303 aa21.14■□□□□ 0.97
USF3-203ENST00000491165 TMEM19Q96HH6 336 aa21.14■□□□□ 0.97
USF3-203ENST00000491165 NDC1Q9BTX1 674 aa21.14■□□□□ 0.97
USF3-203ENST00000491165 AKIRIN1Q9H9L7 192 aaPredicted RBP21.14■□□□□ 0.97
USF3-203ENST00000491165 HCN3Q9P1Z3 774 aa21.14■□□□□ 0.97
USF3-203ENST00000491165 NDOR1Q9UHB4 597 aa21.14■□□□□ 0.97
USF3-203ENST00000491165 SATB2Q9UPW6 733 aa21.14■□□□□ 0.97
USF3-203ENST00000491165 A0A075B6Q4 140 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 GLOD5A6NK44 160 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 GPX5O75715 221 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 PDE9AO76083 593 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 MFN2O95140 757 aa21.13■□□□□ 0.97
USF3-203ENST00000491165 OXSR1O95747 527 aaPredicted RBP21.13■□□□□ 0.97
USF3-203ENST00000491165 ELAVL4P26378 380 aaKnown RBP21.13■□□□□ 0.97
USF3-203ENST00000491165 DOC2BQ14184 412 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms