RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 ADGRE4PQ86SQ3 457 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 YRDCQ86U90 279 aaKnown RBP9.4□□□□□ -0.9
TTC28-207ENST00000490475 GRAMD2AQ8IUY3 354 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 RIMKLAQ8IXN7 391 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 KIRREL3Q8IZU9 778 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 LRRC8CQ8TDW0 803 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 DYDC1Q8WWB3 177 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 SMPDL3BQ92485 455 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 TMBIM1Q969X1 311 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 MTERF3Q96E29 417 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 CHMP6Q96FZ7 201 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 SFXN2Q96NB2 322 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 RBM24Q9BX46 236 aaKnown RBP9.4□□□□□ -0.9
TTC28-207ENST00000490475 NSRP1Q9H0G5 558 aaKnown RBP9.4□□□□□ -0.9
TTC28-207ENST00000490475 PTGES2Q9H7Z7 377 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 C3orf14Q9HBI5 128 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 GALNT9Q9HCQ5 603 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 SLCO1B3Q9NPD5 702 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 SERHLQ9NQF3 203 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 INTS9Q9NV88 658 aaKnown RBP9.4□□□□□ -0.9
TTC28-207ENST00000490475 ASIC5Q9NY37 505 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 NOP53Q9NZM5 478 aaKnown RBP9.4□□□□□ -0.9
TTC28-207ENST00000490475 PACSIN3Q9UKS6 424 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 ABCG2Q9UNQ0 655 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 C19orf53Q9UNZ5 99 aaPredicted RBP9.4□□□□□ -0.9
TTC28-207ENST00000490475 MAPRE3Q9UPY8 281 aa9.4□□□□□ -0.9
TTC28-207ENST00000490475 MED12Q93074 2177 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 TRPC5OSA6NMA1 111 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 CLCA1A8K7I4 914 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 SLCO1B7G3V0H7 640 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 PLOD2O00469 737 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 MSTNO14793 375 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 TSPAN2O60636 221 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 DNAJC8O75937 253 aaPredicted RBP9.39□□□□□ -0.91
TTC28-207ENST00000490475 ALDOCP09972 364 aaKnown RBP9.39□□□□□ -0.91
TTC28-207ENST00000490475 CT45A8P0DMV1 189 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 CT45A9P0DMV2 189 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 PEPDP12955 493 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 DDX5P17844 614 aaKnown RBP9.39□□□□□ -0.91
TTC28-207ENST00000490475 KLK2P20151 261 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 PRPS1L1P21108 318 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 DPP4P27487 766 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 HPCAL1P37235 193 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 PTGDSP41222 190 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 FRKP42685 505 aaPredicted RBP9.39□□□□□ -0.91
TTC28-207ENST00000490475 NME5P56597 212 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 CLDN8P56748 225 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 DECR1Q16698 335 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 PGS1Q32NB8 556 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 SLC9B1Q4ZJI4 515 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 CT45A2Q5DJT8 189 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 NXNQ6DKJ4 435 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 P4HA3Q7Z4N8 544 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 OR2L13Q8N349 312 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 MEIOBQ8N635 442 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 WDSUB1Q8N9V3 476 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 OR4K17Q8NGC6 315 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 OR4N2Q8NGD1 307 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 PIWIL2Q8TC59 973 aaKnown RBP9.39□□□□□ -0.91
TTC28-207ENST00000490475 CKAP2Q8WWK9 683 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 COQ8BQ96D53 544 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 ZBED6CLQ96FA7 236 aaPredicted RBP9.39□□□□□ -0.91
TTC28-207ENST00000490475 ZNF764Q96H86 408 aaPredicted RBP9.39□□□□□ -0.91
TTC28-207ENST00000490475 VSTM2LQ96N03 204 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 ADOQ96SZ5 270 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 TUBA1CQ9BQE3 449 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 FOLH1BQ9HBA9 442 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 NEUROD4Q9HD90 331 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 Q9N2J8 555 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 ZNF226Q9NYT6 803 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 PPP4R1LQ9P1A2 415 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 CAPN7Q9Y6W3 813 aa9.39□□□□□ -0.91
TTC28-207ENST00000490475 A0A1W2PRB8 838 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 SH3D21A4FU49 640 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 CFAP73A6NFT4 308 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 FAM171A2A8MVW0 826 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 ANKRD28O15084 1053 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 HCRTR2O43614 444 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 ZNF708P17019 499 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 GPC1P35052 558 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 RPL3P39023 403 aaKnown RBP9.38□□□□□ -0.91
TTC28-207ENST00000490475 LHX2P50458 406 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 PRKAG1P54619 331 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 UFM1P61960 85 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 SRYQ05066 204 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 RIPK1Q13546 671 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 DEFB113Q30KQ7 82 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 GLYR1Q49A26 553 aaPredicted RBP9.38□□□□□ -0.91
TTC28-207ENST00000490475 VPS26BQ4G0F5 336 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 DCST1Q5T197 706 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 EPGNQ6UW88 154 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 NPSR1Q6W5P4 371 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 SLC44A2Q8IWA5 706 aaPredicted RBP9.38□□□□□ -0.91
TTC28-207ENST00000490475 C9orf106Q8NAJ2 232 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 RNF138Q8WVD3 245 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 INTS12Q96CB8 462 aaKnown RBP9.38□□□□□ -0.91
TTC28-207ENST00000490475 TEX37Q96LM6 180 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 C7orf26Q96N11 449 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 OR52B2Q96RD2 323 aa9.38□□□□□ -0.91
TTC28-207ENST00000490475 PRPF18Q99633 342 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms