RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 TUBD1Q9UJT1 453 aa4.73□□□□□ -1.65
PTPRK-213ENST00000490332 SH2B3Q9UQQ2 575 aa4.73□□□□□ -1.65
PTPRK-213ENST00000490332 ENTPD4Q9Y227 616 aa4.73□□□□□ -1.65
PTPRK-213ENST00000490332 IFT52Q9Y366 437 aa4.73□□□□□ -1.65
PTPRK-213ENST00000490332 PCDHGA3Q9Y5H0 932 aa4.73□□□□□ -1.65
PTPRK-213ENST00000490332 ZNF780BQ9Y6R6 833 aa4.73□□□□□ -1.65
PTPRK-213ENST00000490332 DGKBQ9Y6T7 804 aa4.73□□□□□ -1.65
PTPRK-213ENST00000490332 CCDC88CQ9P219 2028 aa4.73□□□□□ -1.65
PTPRK-213ENST00000490332 COL6A5A8TX70 2615 aa4.73□□□□□ -1.65
PTPRK-213ENST00000490332 hCG_2014768A0A024R1R8 64 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 TBC1D3KA0A087X1G2 549 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 IGHV1OR15-9A0A0B4J2B8 117 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 TCRBV21S2A2A0A5A6 115 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 TBC1D3FA6NER0 549 aaPredicted RBP4.72□□□□□ -1.65
PTPRK-213ENST00000490332 PRAMEF25A6NGN4 478 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 AGAP5A6NIR3 686 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 METTL15A6NJ78 407 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 PDZK1P1A8MUH7 402 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 H3BN98 237 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 TNFRSF10CO14798 259 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 MID1O15344 667 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 BCAT2O15382 392 aaPredicted RBP4.72□□□□□ -1.65
PTPRK-213ENST00000490332 PLRG1O43660 514 aaKnown RBP4.72□□□□□ -1.65
PTPRK-213ENST00000490332 PRICKLE3O43900 615 aaPredicted RBP4.72□□□□□ -1.65
PTPRK-213ENST00000490332 LCMT2O60294 686 aaKnown RBP4.72□□□□□ -1.65
PTPRK-213ENST00000490332 RNGTTO60942 597 aaKnown RBP4.72□□□□□ -1.65
PTPRK-213ENST00000490332 TBX6O95947 436 aaPredicted RBP4.72□□□□□ -1.65
PTPRK-213ENST00000490332 LGI1O95970 557 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 PAK4O96013 591 aaPredicted RBP4.72□□□□□ -1.65
PTPRK-213ENST00000490332 APOA1P02647 267 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 C1QCP02747 245 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 DNTTP04053 509 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 HMGN1P05114 100 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 ALPPP05187 535 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 SCG5P05408 212 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 SERPIND1P05546 499 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 BCHEP06276 602 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 CEACAM5P06731 702 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 STSP08842 583 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 OR12D1P0DN82 309 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 ATP5A1P25705 553 aaKnown RBP4.72□□□□□ -1.65
PTPRK-213ENST00000490332 POU1F1P28069 291 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 EPHA2P29317 976 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 RBMS1P29558 406 aaKnown RBP4.72□□□□□ -1.65
PTPRK-213ENST00000490332 C21orf33P30042 268 aaPredicted RBP4.72□□□□□ -1.65
PTPRK-213ENST00000490332 NTSR1P30989 418 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 DRD3P35462 400 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 TGFBR2P37173 567 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 LIPAP38571 399 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 ETV6P41212 452 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 STAT5AP42229 794 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 GIPRP48546 466 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 NCBP2P52298 156 aaKnown RBP eCLIP4.72□□□□□ -1.65
PTPRK-213ENST00000490332 SMSP52788 366 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 METAP1P53582 386 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 CLDN6P56747 220 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 NCS1P62166 190 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 RPS15AP62244 130 aaKnown RBP4.72□□□□□ -1.65
PTPRK-213ENST00000490332 E2F1Q01094 437 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 RUNX1T1Q06455 604 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 RGS1Q08116 209 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 ST3GAL3Q11203 375 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 HSPB3Q12988 150 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 SLAMF1Q13291 335 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 KIR2DS3Q14952 304 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 TRAM2Q15035 370 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 IRF4Q15306 451 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 CEBPEQ15744 281 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 RPE65Q16518 533 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 SYT16Q17RD7 645 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 ZSWIM7Q19AV6 140 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 PRSS53Q2L4Q9 553 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 ANKDD1AQ495B1 522 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 SPANXN2Q5MJ10 180 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 ENTPD8Q5MY95 495 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 MANEAQ5SRI9 462 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 AGBL4Q5VU57 503 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 AGAP7PQ5VUJ5 663 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 C12orf73Q69YU5 71 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 TBC1D3GQ6DHY5 549 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 MRM1Q6IN84 353 aaKnown RBP4.72□□□□□ -1.65
PTPRK-213ENST00000490332 C1orf94Q6P1W5 598 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 TNFAIP8L2Q6P589 184 aaPredicted RBP4.72□□□□□ -1.65
PTPRK-213ENST00000490332 ZCCHC12Q6PEW1 402 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 KLHL17Q6TDP4 642 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 USP30Q70CQ3 517 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 KANSL1Q7Z3B3 1105 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 UBE3DQ7Z6J8 389 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 NRROSQ86YC3 692 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 RBM12BQ8IXT5 1001 aaKnown RBP4.72□□□□□ -1.65
PTPRK-213ENST00000490332 MFSD4AQ8N468 514 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 ACOT4Q8N9L9 421 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 LMNTD1Q8N9Z9 388 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 OR13H1Q8NG92 308 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 NT5CQ8TCD5 201 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 APOBEC4Q8WW27 367 aaKnown RBP4.72□□□□□ -1.65
PTPRK-213ENST00000490332 RFKQ969G6 155 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 UBE2FQ969M7 185 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 FAM131CQ96AQ9 280 aa4.72□□□□□ -1.65
PTPRK-213ENST00000490332 MS4A6EQ96DS6 147 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms