RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 SNRNP48Q6IEG0 339 aaKnown RBP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 OR4F3Q6IEY1 312 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 TYW3Q6IPR3 259 aaKnown RBP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 SLC25A25Q6KCM7 469 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 DHRS11Q6UWP2 260 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 LINGO4Q6UY18 593 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 CACUL1Q86Y37 369 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 ERO1BQ86YB8 467 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 TBC1D10CQ8IV04 446 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 CCDC36Q8IYA8 594 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 CDK20Q8IZL9 346 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 FAM83FQ8NEG4 500 aaPredicted RBP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 OR51G2Q8NGK0 314 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 OR1L6Q8NGR2 347 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 OR13F1Q8NGS4 319 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 WDR36Q8NI36 951 aaKnown RBP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 THAP6Q8TBB0 222 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 SMPDL3AQ92484 453 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 ELMO1Q92556 727 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 SLCO2A1Q92959 643 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 PCED1BQ96HM7 432 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 ADGRG7Q96K78 797 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 PRRC1Q96M27 445 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 UHRF2Q96PU4 802 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 CCT8L2Q96SF2 557 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 S1PR3Q99500 378 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 TMEM246Q9BRR3 403 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 TTYH2Q9BSA4 534 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 UBAC1Q9BSL1 405 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 RPP25Q9BUL9 199 aaKnown RBP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 DNTTIP1Q9H147 329 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 GPN2Q9H9Y4 310 aaPredicted RBP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 C1orf123Q9NWV4 160 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 FLRT3Q9NZU0 649 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 PEF1Q9UBV8 284 aaKnown RBP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 STUB1Q9UNE7 303 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 ERVK-19Q9WJR5 959 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 COLEC10Q9Y6Z7 277 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 LY75O60449 1722 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 KCPQ6ZWJ8 1503 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 MRC1P22897 1456 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 PALLDQ8WX93 1383 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 DLG5Q8TDM6 1919 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 LOC105371242A0A075B767 164 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 A0A1B0GUS0 222 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 A0A1W2PPE3 182 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 SHISA7A6NL88 538 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 C12orf71A8MTZ7 269 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 ANHXE9PGG2 379 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 E9PMD0 336 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 SGK494L7N484 410 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 P2RY10O00398 339 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 SH2D1BO14796 132 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 GRAP2O75791 330 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 B3GAT3O94766 335 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 STK17BO94768 372 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 SORBS2O94875 1100 aaKnown RBP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 IGLV2-11P01706 119 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 GLAP06280 429 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 UMODP07911 640 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 HIST1H2AGP0C0S8 130 aaPredicted RBP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 ZNF853P0CG23 659 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 GSTT2P0CG29 244 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 GSTT2BP0CG30 244 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 UMPSP11172 480 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 DAOP14920 347 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 GLRA1P23415 457 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 SFTPDP35247 375 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 SGSHP51688 502 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 PLA2G16P53816 162 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 NAPAP54920 295 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 CDH6P55285 790 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 ATP5J2P56134 94 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 SLC8A3P57103 927 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 CSTF1Q05048 431 aaKnown RBP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 ZFP36L1Q07352 338 aaKnown RBP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 ST3GAL1Q11201 340 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 MERTKQ12866 999 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 NME3Q13232 169 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 C1orf61Q13536 156 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 KLF5Q13887 457 aaPredicted RBP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 ITIH4Q14624 930 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 CHRNA6Q15825 494 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 SLC15A2Q16348 729 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 ODF4Q2M2E3 257 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 HNRNPA1L2Q32P51 320 aaKnown RBP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 AMZ1Q400G9 498 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 ACCSLQ4AC99 568 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 TEX44Q53QW1 395 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 DCAF12Q5T6F0 453 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 HIST2H2AA3Q6FI13 130 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 Q7L0L9 218 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 PIWIL4Q7Z3Z4 852 aaKnown RBP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 LUZP2Q86TE4 346 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 VRK2Q86Y07 508 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 NAGSQ8N159 534 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 LINC01561Q8N1V8 128 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 PGBD5Q8N414 524 aa2.79□□□□□ -1.96
DEPDC1-204ENST00000489862 RFLNBQ8N5W9 214 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms