RNA–Protein interactions for RNA: ENST00000489842.1

GTF3C5-210, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 2

Gene GTF3C5, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-210ENST00000489842 MRPS18CQ9Y3D5 142 aaKnown RBP8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 V9GYY5 206 aaPredicted RBP8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 DNHD1Q96M86 4753 aa8.18□□□□□ -1.1
GTF3C5-210ENST00000489842 RAI1Q7Z5J4 1906 aaPredicted RBP8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 A0A0J9YW62 118 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 CCDC151A5D8V7 595 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 TNFSF11O14788 317 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 MSTNO14793 375 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 CTIFO43310 598 aaKnown RBP8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 RGS14O43566 566 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 TRIM13O60858 407 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 LYPLA1O75608 230 aaPredicted RBP8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 SLU7O95391 586 aaKnown RBP8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 THBDP07204 575 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 POU2F1P14859 743 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 PRPH2P23942 346 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 HOXC12P31275 282 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 CD79BP40259 229 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 FRKP42685 505 aaPredicted RBP8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 KCNJ5P48544 419 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 CCT5P48643 541 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 PRIM2P49643 509 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 VSNL1P62760 191 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 PPP2R2AP63151 447 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 PRR5P85299 388 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 PDE7AQ13946 482 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 LASP1Q14847 261 aaKnown RBP8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 PTGR1Q14914 329 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 ZNHIT3Q15649 155 aaPredicted RBP8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 TOMM34Q15785 309 aaPredicted RBP8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 BCL2A1Q16548 175 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 SGCBQ16585 318 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 CTU2Q2VPK5 515 aaKnown RBP8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 MFSD12Q6NUT3 480 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 HMGN2P46Q86SG4 172 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 BANPQ8N9N5 519 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 ATP6V1C2Q8NEY4 427 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 OR5AK3PQ8NH89 298 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 FAM76AQ8TAV0 307 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 FAM110BQ8TC76 370 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 HOXB13Q92826 284 aaPredicted RBP8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 MBD6Q96DN6 1003 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 FAM120BQ96EK7 910 aaKnown RBP8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 CHMP6Q96FZ7 201 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 ADGRG7Q96K78 797 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 PKNOX2Q96KN3 472 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 PIGMQ9H3S5 423 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 C12orf49Q9H741 205 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 CXorf36Q9H7Y0 433 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 RNF122Q9H9V4 155 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 RYDENQ9NUL5 291 aaKnown RBP8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 ABCG2Q9UNQ0 655 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 TRAF6Q9Y4K3 522 aa8.17□□□□□ -1.1
GTF3C5-210ENST00000489842 NIPBLQ6KC79 2804 aaeCLIP8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 IGLV3-32A0A0A0MS00 114 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 IGHV3-15A0A0B4J1V0 119 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 CENPVL1A0A0U1RR11 272 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 A0A1W2PRB8 838 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 WDR91A4D1P6 747 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 KIF2AO00139 706 aaPredicted RBP8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 CASKO14936 926 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 EMC8O43402 210 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 NDUFB5O43674 189 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 ITM2AO43736 263 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 TNFRSF21O75509 655 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 KCNH1O95259 989 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 C6orf47O95873 294 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 HMGN2P05204 90 aaKnown RBP8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 PSMA4P25789 261 aaKnown RBP8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 SFTPDP35247 375 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 UGT2B10P36537 528 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 DIO3P55073 304 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 RPS26P62854 115 aaKnown RBP8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 C17orf67Q0P5P2 114 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 FOXF1Q12946 379 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 GUSBP1Q15486 140 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 PLPPR5Q32ZL2 321 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 EXOSC6Q5RKV6 272 aaKnown RBP8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 CBLN3Q6UW01 205 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 LRIG3Q6UXM1 1119 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 IKBIPQ70UQ0 350 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 ATG4DQ86TL0 474 aaPredicted RBP8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 TRABD2AQ86V40 505 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 METTL25Q8N6Q8 603 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 COX18Q8N8Q8 333 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 CHDHQ8NE62 594 aaPredicted RBP8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 OR5D16Q8NGK9 328 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 OR10D3Q8NH80 312 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 RFWD2Q8NHY2 731 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 TCP10LQ8TDR4 215 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 DNAJA3Q96EY1 480 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 APOPT1Q96IL0 206 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 MARK4Q96L34 752 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 ZFP3Q96NJ6 502 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 ALPK1Q96QP1 1244 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 CCT7Q99832 543 aa8.16□□□□□ -1.1
GTF3C5-210ENST00000489842 MED18Q9BUE0 208 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms