RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 REXO5Q96IC2 774 aaKnown RBP8.39□□□□□ -1.07
SNX17-207ENST00000489402 NPAS1Q99742 590 aa8.39□□□□□ -1.07
SNX17-207ENST00000489402 TACO1Q9BSH4 297 aaKnown RBP8.39□□□□□ -1.07
SNX17-207ENST00000489402 ACTR6Q9GZN1 396 aa8.39□□□□□ -1.07
SNX17-207ENST00000489402 OR10A4Q9H209 315 aa8.39□□□□□ -1.07
SNX17-207ENST00000489402 RRAGDQ9NQL2 400 aaPredicted RBP8.39□□□□□ -1.07
SNX17-207ENST00000489402 CLEC4AQ9UMR7 237 aa8.39□□□□□ -1.07
SNX17-207ENST00000489402 GXYLT2A0PJZ3 443 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 ALG1L2C9J202 215 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 GOLGA8RI6L899 631 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 HS3ST1O14792 307 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 PDPK1O15530 556 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 CXCL13O43927 109 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 THBDP07204 575 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 TUBBP07437 444 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 GSTA1P08263 222 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 ABHD2P08910 425 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 PABPC4LP0CB38 370 aaKnown RBP8.38□□□□□ -1.07
SNX17-207ENST00000489402 PRPS2P11908 318 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 HPGDP15428 266 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 IL11P20809 199 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 SLC6A8P48029 635 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 FOXA1P55317 472 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 RPS4XP62701 263 aaKnown RBP8.38□□□□□ -1.07
SNX17-207ENST00000489402 RAC1P63000 192 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 SLC29A2Q14542 456 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 HBMQ6B0K9 141 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 ESPNLQ6ZVH7 1005 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 GTPBP8Q8N3Z3 284 aaPredicted RBP8.38□□□□□ -1.07
SNX17-207ENST00000489402 ZNF611Q8N823 705 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 CDRT4Q8N9R6 151 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 NOA1Q8NC60 698 aaKnown RBP8.38□□□□□ -1.07
SNX17-207ENST00000489402 MNS1Q8NEH6 495 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 OR2V1Q8NHB1 315 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 CEP70Q8NHQ1 597 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 ZFP28Q8NHY6 868 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.38□□□□□ -1.07
SNX17-207ENST00000489402 PIK3R3Q92569 461 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 ZBTB8AQ96BR9 441 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 MDFIQ99750 246 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 GSTO2Q9H4Y5 243 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 TNFRSF12AQ9NP84 129 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 ZNF701Q9NV72 531 aaPredicted RBP8.38□□□□□ -1.07
SNX17-207ENST00000489402 GPR52Q9Y2T5 361 aa8.38□□□□□ -1.07
SNX17-207ENST00000489402 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.38□□□□□ -1.07
SNX17-207ENST00000489402 C7orf72A4D263 438 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 SCDO00767 359 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 TNFSF11O14788 317 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 ADAMDEC1O15204 470 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 SEC22BO75396 215 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 NKX2-2O95096 273 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 OXSR1O95747 527 aaPredicted RBP8.37□□□□□ -1.07
SNX17-207ENST00000489402 PLAUP00749 431 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 IGKV1D-16P01601 117 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 NGFRP08138 427 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 MYL2P10916 166 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 PSMB1P20618 241 aaKnown RBP8.37□□□□□ -1.07
SNX17-207ENST00000489402 LCN1P31025 176 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 PRKAG1P54619 331 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 SLC18A2Q05940 514 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 VEZF1Q14119 521 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.37□□□□□ -1.07
SNX17-207ENST00000489402 CTU2Q2VPK5 515 aaKnown RBP8.37□□□□□ -1.07
SNX17-207ENST00000489402 PLPPR5Q32ZL2 321 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 GLE1Q53GS7 698 aaKnown RBP8.37□□□□□ -1.07
SNX17-207ENST00000489402 CFAP157Q5JU67 520 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 TMEM201Q5SNT2 666 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 ALKBH2Q6NS38 261 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 NOXRED1Q6NXP6 359 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 APOOLQ6UXV4 268 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 CXXC5Q7LFL8 322 aaKnown RBP8.37□□□□□ -1.07
SNX17-207ENST00000489402 ZNF551Q7Z340 670 aaPredicted RBP8.37□□□□□ -1.07
SNX17-207ENST00000489402 TRIM46Q7Z4K8 759 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 GALNT10Q86SR1 603 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 EXOC3L1Q86VI1 746 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 MISPQ8IVT2 679 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 CEP112Q8N8E3 955 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 GATSQ8NAP1 163 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 NUP43Q8NFH3 380 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 STEAP2Q8NFT2 490 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 OR6Y1Q8NGX8 325 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 SPATA3Q8NHX4 192 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 ACTRT2Q8TDY3 377 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 IGFBPL1Q8WX77 278 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 AKAP1Q92667 903 aaKnown RBP eCLIP8.37□□□□□ -1.07
SNX17-207ENST00000489402 ZBED6CLQ96FA7 236 aaPredicted RBP8.37□□□□□ -1.07
SNX17-207ENST00000489402 TRMT61AQ96FX7 289 aaKnown RBP8.37□□□□□ -1.07
SNX17-207ENST00000489402 METTL2AQ96IZ6 378 aaKnown RBP8.37□□□□□ -1.07
SNX17-207ENST00000489402 ADGRG7Q96K78 797 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 RNF145Q96MT1 663 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 MS4A4EQ96PG1 132 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 C12orf49Q9H741 205 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 TMEM185BQ9H7F4 350 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 NGBQ9NPG2 151 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 TIGARQ9NQ88 270 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 PSMC3IPQ9P2W1 217 aaPredicted RBP8.37□□□□□ -1.07
SNX17-207ENST00000489402 DCDC2Q9UHG0 476 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 LAMP3Q9UQV4 416 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 RNF115Q9Y4L5 304 aa8.37□□□□□ -1.07
SNX17-207ENST00000489402 SNX8Q9Y5X2 465 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms