RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 RANBP3LQ86VV4 465 aaPredicted RBP7.88□□□□□ -1.15
VTI1A-207ENST00000489357 RNF113BQ8IZP6 322 aaKnown RBP7.88□□□□□ -1.15
VTI1A-207ENST00000489357 SLC22A18ASQ8N1D0 253 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 CSNK1A1LQ8N752 337 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 MORN4Q8NDC4 146 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 PROKR2Q8NFJ6 384 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 OR6T1Q8NGN1 323 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 OR9A2Q8NGT5 310 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 CCL4L1Q8NHW4 92 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 VANGL1Q8TAA9 524 aaPredicted RBP7.88□□□□□ -1.15
VTI1A-207ENST00000489357 SLC37A2Q8TED4 501 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 ACOT11Q8WXI4 607 aaPredicted RBP7.88□□□□□ -1.15
VTI1A-207ENST00000489357 DIO2Q92813 273 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 OSTF1Q92882 214 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 LGALS12Q96DT0 336 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 KLHDC7BQ96G42 594 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 SLC38A2Q96QD8 506 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 PELOQ9BRX2 385 aaKnown RBP7.88□□□□□ -1.15
VTI1A-207ENST00000489357 EDEM2Q9BV94 578 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 ZNF350Q9GZX5 532 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 RAB33BQ9H082 229 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 MMP27Q9H306 513 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 ISYNA1Q9NPH2 558 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 FSCN3Q9NQT6 498 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 MAN2C1Q9NTJ4 1040 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 HRASLS2Q9NWW9 162 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 NLGN3Q9NZ94 848 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 CCDC59Q9P031 241 aaKnown RBP7.88□□□□□ -1.15
VTI1A-207ENST00000489357 EPHA6Q9UF33 1036 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 PNMA8BQ9ULN7 279 aaPredicted RBP7.88□□□□□ -1.15
VTI1A-207ENST00000489357 ERGIC3Q9Y282 383 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 MRPS33Q9Y291 106 aaKnown RBP7.88□□□□□ -1.15
VTI1A-207ENST00000489357 CA5BQ9Y2D0 317 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 KLHL20Q9Y2M5 609 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 WDR45Q9Y484 360 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 PCDHGB2Q9Y5G2 931 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 SNX11Q9Y5W9 270 aa7.88□□□□□ -1.15
VTI1A-207ENST00000489357 TPRP12270 2363 aaKnown RBP7.87□□□□□ -1.15
VTI1A-207ENST00000489357 A0A0J9YVX5 310 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 A0A1B0GTQ1 180 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 HTR3EA5X5Y0 456 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 SYNDIG1LA6NDD5 238 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 H3BN98 237 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 CCRL2O00421 344 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 CYR61O00622 381 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 AIREO43918 545 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 CBFA2T3O75081 653 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 CYP7B1O75881 506 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 GHRHP01286 108 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 CSF2P04141 144 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 ALOX5P09917 674 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 SLC35E2P0CK97 266 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 CD59P13987 128 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 NME1P15531 152 aaKnown RBP7.87□□□□□ -1.15
VTI1A-207ENST00000489357 CSTF2P33240 577 aaKnown RBP eCLIP7.87□□□□□ -1.15
VTI1A-207ENST00000489357 MAP3K8P41279 467 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 STAT5AP42229 794 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 GIPRP48546 466 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 GSSP48637 474 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 PCYT1AP49585 367 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 RGS6P49758 472 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 BMXP51813 675 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 COPZ1P61923 177 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 EFNB1P98172 346 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 PIGFQ07326 219 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 MAP4K2Q12851 820 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 BNIP3Q12983 259 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 AQP6Q13520 282 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 PIN1Q13526 163 aaPredicted RBP7.87□□□□□ -1.15
VTI1A-207ENST00000489357 RUNX2Q13950 521 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 FAM53BQ14153 422 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 NR1D2Q14995 579 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 SPCS2Q15005 226 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 HLA-BQ31612 363 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 PERM1Q5SV97 790 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.87□□□□□ -1.15
VTI1A-207ENST00000489357 STPG1Q5TH74 334 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 FAM180BQ6P0A1 224 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 SLC27A4Q6P1M0 643 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 DGLUCYQ7Z3D6 616 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 TAF8Q7Z7C8 310 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 GKN2Q86XP6 184 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 CYP4Z2PQ8N1L4 340 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 ZNF619Q8N2I2 560 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 B3GNT7Q8NFL0 401 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 OR7G2Q8NG99 324 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 OR4D11Q8NGI4 311 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 OR52P1PQ8NH57 321 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 OR10G6Q8NH81 332 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 PIGXQ8TBF5 258 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 TEX47Q8TBZ9 253 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 RFKQ969G6 155 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 CTHRC1Q96CG8 243 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 ZHX1-C8orf76Q96EF9 292 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 TCTN2Q96GX1 697 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 TMEM80Q96HE8 168 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 CD180Q99467 661 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 CCDC3Q9BQI4 270 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 MND1Q9BWT6 205 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 MIR1-1HGQ9H1L0 117 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms