RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 C10orf111Q8N326 155 aa13.81□□□□□ -0.2
FDPS-213ENST00000489003 POU5F2Q8N7G0 328 aa13.81□□□□□ -0.2
FDPS-213ENST00000489003 RP9Q8TA86 221 aaKnown RBP13.81□□□□□ -0.2
FDPS-213ENST00000489003 ANKRD27Q96NW4 1050 aa13.81□□□□□ -0.2
FDPS-213ENST00000489003 TRNT1Q96Q11 434 aaKnown RBP13.81□□□□□ -0.2
FDPS-213ENST00000489003 CGREF1Q99674 301 aa13.81□□□□□ -0.2
FDPS-213ENST00000489003 PPP4R1LQ9P1A2 415 aa13.81□□□□□ -0.2
FDPS-213ENST00000489003 B4GALT7Q9UBV7 327 aa13.81□□□□□ -0.2
FDPS-213ENST00000489003 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.81□□□□□ -0.2
FDPS-213ENST00000489003 FBXL2Q9UKC9 423 aa13.81□□□□□ -0.2
FDPS-213ENST00000489003 ARL2BPQ9Y2Y0 163 aa13.81□□□□□ -0.2
FDPS-213ENST00000489003 WDR45Q9Y484 360 aa13.81□□□□□ -0.2
FDPS-213ENST00000489003 LIPGQ9Y5X9 500 aa13.81□□□□□ -0.2
FDPS-213ENST00000489003 RP1L1Q8IWN7 2480 aaPredicted RBP13.81□□□□□ -0.2
FDPS-213ENST00000489003 IGLV3-32A0A0A0MS00 114 aa13.8□□□□□ -0.2
FDPS-213ENST00000489003 A0A1B0GVC2 190 aa13.8□□□□□ -0.2
FDPS-213ENST00000489003 A0A1W2PQD3 144 aa13.8□□□□□ -0.2
FDPS-213ENST00000489003 NDUFB5O43674 189 aa13.8□□□□□ -0.2
FDPS-213ENST00000489003 TNFRSF21O75509 655 aa13.8□□□□□ -0.2
FDPS-213ENST00000489003 UGT2B17O75795 530 aa13.8□□□□□ -0.2
FDPS-213ENST00000489003 H6PDO95479 791 aa13.8□□□□□ -0.2
FDPS-213ENST00000489003 NR2F1P10589 423 aa13.8□□□□□ -0.2
FDPS-213ENST00000489003 COX4I1P13073 169 aa13.8□□□□□ -0.2
FDPS-213ENST00000489003 HPGDP15428 266 aa13.8□□□□□ -0.2
FDPS-213ENST00000489003 PPIBP23284 216 aaKnown RBP13.8□□□□□ -0.2
FDPS-213ENST00000489003 FADDQ13158 208 aa13.8□□□□□ -0.2
FDPS-213ENST00000489003 SELPLGQ14242 412 aa13.8□□□□□ -0.2
FDPS-213ENST00000489003 TOMM20Q15388 145 aa13.8□□□□□ -0.2
FDPS-213ENST00000489003 ZNF141Q15928 474 aa13.8□□□□□ -0.2
FDPS-213ENST00000489003 MAPK14Q16539 360 aa13.8□□□□□ -0.2
FDPS-213ENST00000489003 REP15Q6BDI9 236 aa13.8□□□□□ -0.2
FDPS-213ENST00000489003 FADS6Q8N9I5 356 aa13.8□□□□□ -0.2
FDPS-213ENST00000489003 GATSQ8NAP1 163 aa13.8□□□□□ -0.2
FDPS-213ENST00000489003 OR2M3Q8NG83 312 aa13.8□□□□□ -0.2
FDPS-213ENST00000489003 SLC38A5Q8WUX1 472 aa13.8□□□□□ -0.2
FDPS-213ENST00000489003 CPPED1Q9BRF8 314 aaPredicted RBP13.8□□□□□ -0.2
FDPS-213ENST00000489003 POLE3Q9NRF9 147 aa13.8□□□□□ -0.2
FDPS-213ENST00000489003 ZNF835Q9Y2P0 537 aa13.8□□□□□ -0.2
FDPS-213ENST00000489003 MRPS18CQ9Y3D5 142 aaKnown RBP13.8□□□□□ -0.2
FDPS-213ENST00000489003 DTNAQ9Y4J8 743 aa13.8□□□□□ -0.2
FDPS-213ENST00000489003 POLEQ07864 2286 aa13.79□□□□□ -0.2
FDPS-213ENST00000489003 BBIP1A8MTZ0 92 aa13.79□□□□□ -0.2
FDPS-213ENST00000489003 EVPLLA8MZ36 301 aa13.79□□□□□ -0.2
FDPS-213ENST00000489003 MRASO14807 208 aa13.79□□□□□ -0.2
FDPS-213ENST00000489003 HCN1O60741 890 aa13.79□□□□□ -0.2
FDPS-213ENST00000489003 FAM107AO95990 144 aa13.79□□□□□ -0.2
FDPS-213ENST00000489003 CHRM4P08173 479 aa13.79□□□□□ -0.2
FDPS-213ENST00000489003 RNF144AP50876 292 aaPredicted RBP13.79□□□□□ -0.2
FDPS-213ENST00000489003 CAPRIN1Q14444 709 aaKnown RBP13.79□□□□□ -0.2
FDPS-213ENST00000489003 CD226Q15762 336 aa13.79□□□□□ -0.2
FDPS-213ENST00000489003 EIPR1Q53HC9 387 aa13.79□□□□□ -0.2
FDPS-213ENST00000489003 WIPI1Q5MNZ9 446 aaPredicted RBP13.79□□□□□ -0.2
FDPS-213ENST00000489003 PDZK1Q5T2W1 519 aa13.79□□□□□ -0.2
FDPS-213ENST00000489003 NANOGP8Q6NSW7 305 aa13.79□□□□□ -0.2
FDPS-213ENST00000489003 YRDCQ86U90 279 aaKnown RBP13.79□□□□□ -0.2
FDPS-213ENST00000489003 SPPL2CQ8IUH8 684 aa13.79□□□□□ -0.2
FDPS-213ENST00000489003 ZNF619Q8N2I2 560 aa13.79□□□□□ -0.2
FDPS-213ENST00000489003 FAM83FQ8NEG4 500 aaPredicted RBP13.79□□□□□ -0.2
FDPS-213ENST00000489003 OR4K17Q8NGC6 315 aa13.79□□□□□ -0.2
FDPS-213ENST00000489003 PRR7Q8TB68 274 aa13.79□□□□□ -0.2
FDPS-213ENST00000489003 PHOSPHO1Q8TCT1 267 aa13.79□□□□□ -0.2
FDPS-213ENST00000489003 LRRC58Q96CX6 371 aa13.79□□□□□ -0.2
FDPS-213ENST00000489003 TRIM8Q9BZR9 551 aa13.79□□□□□ -0.2
FDPS-213ENST00000489003 OR2B2Q9GZK3 357 aa13.79□□□□□ -0.2
FDPS-213ENST00000489003 SLC38A1Q9H2H9 487 aa13.79□□□□□ -0.2
FDPS-213ENST00000489003 LDAHQ9H6V9 325 aa13.79□□□□□ -0.2
FDPS-213ENST00000489003 RUBCNLQ9H714 662 aa13.79□□□□□ -0.2
FDPS-213ENST00000489003 MTHFD2LQ9H903 347 aaPredicted RBP13.79□□□□□ -0.2
FDPS-213ENST00000489003 NANOGQ9H9S0 305 aa13.79□□□□□ -0.2
FDPS-213ENST00000489003 THUMPD1Q9NXG2 353 aaKnown RBP13.79□□□□□ -0.2
FDPS-213ENST00000489003 OSGIN2Q9Y236 505 aa13.79□□□□□ -0.2
FDPS-213ENST00000489003 HEATR5AQ86XA9 2040 aa13.79□□□□□ -0.2
FDPS-213ENST00000489003 TRGV5A0A0B4J1U4 118 aa13.78□□□□□ -0.2
FDPS-213ENST00000489003 CENPVL1A0A0U1RR11 272 aa13.78□□□□□ -0.2
FDPS-213ENST00000489003 SERINC4A6NH21 518 aa13.78□□□□□ -0.2
FDPS-213ENST00000489003 OIP5O43482 229 aa13.78□□□□□ -0.2
FDPS-213ENST00000489003 KIAA0513O60268 411 aa13.78□□□□□ -0.2
FDPS-213ENST00000489003 SUSD5O60279 629 aa13.78□□□□□ -0.2
FDPS-213ENST00000489003 ZIC3O60481 467 aa13.78□□□□□ -0.2
FDPS-213ENST00000489003 NPPAP01160 153 aa13.78□□□□□ -0.2
FDPS-213ENST00000489003 DPP4P27487 766 aa13.78□□□□□ -0.2
FDPS-213ENST00000489003 SRD5A2P31213 254 aa13.78□□□□□ -0.2
FDPS-213ENST00000489003 ADH7P40394 386 aa13.78□□□□□ -0.2
FDPS-213ENST00000489003 TRMT5Q32P41 509 aaKnown RBP13.78□□□□□ -0.2
FDPS-213ENST00000489003 ARHGAP11AQ6P4F7 1023 aa13.78□□□□□ -0.2
FDPS-213ENST00000489003 MTERF4Q7Z6M4 381 aaKnown RBP13.78□□□□□ -0.2
FDPS-213ENST00000489003 HMGN2P46Q86SG4 172 aa13.78□□□□□ -0.2
FDPS-213ENST00000489003 ANKS4BQ8N8V4 417 aa13.78□□□□□ -0.2
FDPS-213ENST00000489003 ZNF527Q8NB42 609 aa13.78□□□□□ -0.2
FDPS-213ENST00000489003 PCYOX1LQ8NBM8 494 aa13.78□□□□□ -0.2
FDPS-213ENST00000489003 PMM1Q92871 262 aa13.78□□□□□ -0.2
FDPS-213ENST00000489003 MAL2Q969L2 176 aa13.78□□□□□ -0.2
FDPS-213ENST00000489003 SLC39A3Q9BRY0 314 aa13.78□□□□□ -0.2
FDPS-213ENST00000489003 THUMPD3Q9BV44 507 aaKnown RBP13.78□□□□□ -0.2
FDPS-213ENST00000489003 QRSL1Q9H0R6 528 aaKnown RBP13.78□□□□□ -0.2
FDPS-213ENST00000489003 SLC6A15Q9H2J7 730 aa13.78□□□□□ -0.2
FDPS-213ENST00000489003 P2RX2Q9UBL9 471 aa13.78□□□□□ -0.2
FDPS-213ENST00000489003 CORO2BQ9UQ03 480 aa13.78□□□□□ -0.2
FDPS-213ENST00000489003 A0A0G2JPF8 293 aa13.77□□□□□ -0.21
FDPS-213ENST00000489003 HNRNPCL2B2RXH8 293 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms