RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 TIGARQ9NQ88 270 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 CDH10Q9Y6N8 788 aa24.32■■□□□ 1.48
HLA-C-208ENST00000487245 A0A087WV62 115 aa24.31■■□□□ 1.48
HLA-C-208ENST00000487245 CHST10O43529 356 aa24.31■■□□□ 1.48
HLA-C-208ENST00000487245 NARSO43776 548 aaKnown RBP24.31■■□□□ 1.48
HLA-C-208ENST00000487245 CSF3P09919 207 aa24.31■■□□□ 1.48
HLA-C-208ENST00000487245 PTBP1P26599 531 aaKnown RBP eCLIP24.31■■□□□ 1.48
HLA-C-208ENST00000487245 HTR1FP30939 366 aa24.31■■□□□ 1.48
HLA-C-208ENST00000487245 PPP3R1P63098 170 aa24.31■■□□□ 1.48
HLA-C-208ENST00000487245 DUSP8Q13202 625 aa24.31■■□□□ 1.48
HLA-C-208ENST00000487245 NXNL2Q5VZ03 156 aa24.31■■□□□ 1.48
HLA-C-208ENST00000487245 ZCCHC12Q6PEW1 402 aa24.31■■□□□ 1.48
HLA-C-208ENST00000487245 NKAIN4Q8IVV8 208 aa24.31■■□□□ 1.48
HLA-C-208ENST00000487245 RPLP0P6Q8NHW5 317 aa24.31■■□□□ 1.48
HLA-C-208ENST00000487245 BAHD1Q8TBE0 780 aaPredicted RBP24.31■■□□□ 1.48
HLA-C-208ENST00000487245 DIRAS2Q96HU8 199 aa24.31■■□□□ 1.48
HLA-C-208ENST00000487245 SOSTQ9BQB4 213 aa24.31■■□□□ 1.48
HLA-C-208ENST00000487245 GSDMCQ9BYG8 508 aa24.31■■□□□ 1.48
HLA-C-208ENST00000487245 NLGN3Q9NZ94 848 aa24.31■■□□□ 1.48
HLA-C-208ENST00000487245 GOLGA4Q13439 2230 aaKnown RBP24.31■■□□□ 1.48
HLA-C-208ENST00000487245 TCRBV21S2A2A0A5A6 115 aa24.3■■□□□ 1.48
HLA-C-208ENST00000487245 H0YGG7 62 aa24.3■■□□□ 1.48
HLA-C-208ENST00000487245 THY1P04216 161 aa24.3■■□□□ 1.48
HLA-C-208ENST00000487245 GALP22466 123 aa24.3■■□□□ 1.48
HLA-C-208ENST00000487245 AZGP1P25311 298 aaKnown RBP24.3■■□□□ 1.48
HLA-C-208ENST00000487245 ARF3P61204 181 aaPredicted RBP24.3■■□□□ 1.48
HLA-C-208ENST00000487245 IFITM2Q01629 132 aa24.3■■□□□ 1.48
HLA-C-208ENST00000487245 ZNF155Q12901 538 aaPredicted RBP24.3■■□□□ 1.48
HLA-C-208ENST00000487245 TYW3Q6IPR3 259 aaKnown RBP24.3■■□□□ 1.48
HLA-C-208ENST00000487245 METAP1DQ6UB28 335 aaPredicted RBP24.3■■□□□ 1.48
HLA-C-208ENST00000487245 ARIH2OSQ8N7S6 290 aa24.3■■□□□ 1.48
HLA-C-208ENST00000487245 PSD4Q8NDX1 1056 aa24.3■■□□□ 1.48
HLA-C-208ENST00000487245 OR2B2Q9GZK3 357 aa24.3■■□□□ 1.48
HLA-C-208ENST00000487245 ASB6Q9NWX5 421 aa24.3■■□□□ 1.48
HLA-C-208ENST00000487245 CPNE7Q9UBL6 633 aa24.3■■□□□ 1.48
HLA-C-208ENST00000487245 HMX3A6NHT5 357 aa24.3■■□□□ 1.48
HLA-C-208ENST00000487245 APOL3O95236 402 aa24.3■■□□□ 1.48
HLA-C-208ENST00000487245 SEMA4FO95754 770 aa24.3■■□□□ 1.48
HLA-C-208ENST00000487245 NR4A2P43354 598 aa24.3■■□□□ 1.48
HLA-C-208ENST00000487245 MLLT1Q03111 559 aaPredicted RBP24.3■■□□□ 1.48
HLA-C-208ENST00000487245 RDH10Q8IZV5 341 aa24.3■■□□□ 1.48
HLA-C-208ENST00000487245 KLHL36Q8N4N3 616 aa24.3■■□□□ 1.48
HLA-C-208ENST00000487245 SNX18Q96RF0 628 aa24.3■■□□□ 1.48
HLA-C-208ENST00000487245 SDF2Q99470 211 aa24.3■■□□□ 1.48
HLA-C-208ENST00000487245 CLDND1Q9NY35 253 aa24.3■■□□□ 1.48
HLA-C-208ENST00000487245 MMP17Q9ULZ9 603 aa24.3■■□□□ 1.48
HLA-C-208ENST00000487245 LOC105369274A0A096LPK9 316 aa24.29■■□□□ 1.48
HLA-C-208ENST00000487245 KIR2DS5A0A0G2JLQ3 304 aa24.29■■□□□ 1.48
HLA-C-208ENST00000487245 A0A0G2JNG1 304 aa24.29■■□□□ 1.48
HLA-C-208ENST00000487245 LOC102723532A0A0G2JNH3 316 aa24.29■■□□□ 1.48
HLA-C-208ENST00000487245 A0A0J9YY10 115 aa24.29■■□□□ 1.48
HLA-C-208ENST00000487245 PRAMEF26H0Y7S4 382 aa24.29■■□□□ 1.48
HLA-C-208ENST00000487245 KIR2DS3K7RE56 304 aa24.29■■□□□ 1.48
HLA-C-208ENST00000487245 AKAP8O43823 692 aaKnown RBP24.29■■□□□ 1.48
HLA-C-208ENST00000487245 GABRG2P18507 467 aa24.29■■□□□ 1.48
HLA-C-208ENST00000487245 KIR2DS5Q14953 304 aa24.29■■□□□ 1.48
HLA-C-208ENST00000487245 DUSP5Q16690 384 aa24.29■■□□□ 1.48
HLA-C-208ENST00000487245 ATAD3CQ5T2N8 411 aa24.29■■□□□ 1.48
HLA-C-208ENST00000487245 PDZK1Q5T2W1 519 aa24.29■■□□□ 1.48
HLA-C-208ENST00000487245 FHL5Q5TD97 284 aa24.29■■□□□ 1.48
HLA-C-208ENST00000487245 RNF44Q7L0R7 432 aa24.29■■□□□ 1.48
HLA-C-208ENST00000487245 ABI3BPQ7Z7G0 1075 aa24.29■■□□□ 1.48
HLA-C-208ENST00000487245 OR4N5Q8IXE1 308 aa24.29■■□□□ 1.48
HLA-C-208ENST00000487245 OR4N4Q8N0Y3 316 aa24.29■■□□□ 1.48
HLA-C-208ENST00000487245 PMM1Q92871 262 aa24.29■■□□□ 1.48
HLA-C-208ENST00000487245 TM9SF2Q99805 663 aa24.29■■□□□ 1.48
HLA-C-208ENST00000487245 SATB2Q9UPW6 733 aa24.29■■□□□ 1.48
HLA-C-208ENST00000487245 CLCA2Q9UQC9 943 aa24.29■■□□□ 1.48
HLA-C-208ENST00000487245 COL4A2P08572 1712 aa24.29■■□□□ 1.48
HLA-C-208ENST00000487245 HLA-DQB1P01920 261 aa24.28■■□□□ 1.48
HLA-C-208ENST00000487245 ATP1B1P05026 303 aa24.28■■□□□ 1.48
HLA-C-208ENST00000487245 SNRPNP63162 240 aaKnown RBP24.28■■□□□ 1.48
HLA-C-208ENST00000487245 UBE2IP63279 158 aaKnown RBP24.28■■□□□ 1.48
HLA-C-208ENST00000487245 CCDC92Q53HC0 331 aaPredicted RBP24.28■■□□□ 1.48
HLA-C-208ENST00000487245 CLEC12AQ5QGZ9 265 aa24.28■■□□□ 1.48
HLA-C-208ENST00000487245 EXOSC6Q5RKV6 272 aaKnown RBP24.28■■□□□ 1.48
HLA-C-208ENST00000487245 SLC30A6Q6NXT4 461 aa24.28■■□□□ 1.48
HLA-C-208ENST00000487245 NRMQ8IXM6 262 aa24.28■■□□□ 1.48
HLA-C-208ENST00000487245 TOR4AQ9NXH8 423 aa24.28■■□□□ 1.48
HLA-C-208ENST00000487245 POLHQ9Y253 713 aa24.28■■□□□ 1.48
HLA-C-208ENST00000487245 SCN3AQ9NY46 2000 aa24.28■■□□□ 1.48
HLA-C-208ENST00000487245 C10orf142B7Z368 130 aa24.28■■□□□ 1.48
HLA-C-208ENST00000487245 PLOD3O60568 738 aa24.28■■□□□ 1.48
HLA-C-208ENST00000487245 HCN1O60741 890 aa24.28■■□□□ 1.48
HLA-C-208ENST00000487245 TMCC2O75069 709 aa24.28■■□□□ 1.48
HLA-C-208ENST00000487245 AK1P00568 194 aa24.28■■□□□ 1.48
HLA-C-208ENST00000487245 HLA-DPB1P04440 258 aa24.28■■□□□ 1.48
HLA-C-208ENST00000487245 DBIP07108 87 aaKnown RBP24.28■■□□□ 1.48
HLA-C-208ENST00000487245 CFL1P23528 166 aaKnown RBP24.28■■□□□ 1.48
HLA-C-208ENST00000487245 CD79BP40259 229 aa24.28■■□□□ 1.48
HLA-C-208ENST00000487245 BDH1Q02338 343 aa24.28■■□□□ 1.48
HLA-C-208ENST00000487245 SLC35F1Q5T1Q4 408 aa24.28■■□□□ 1.48
HLA-C-208ENST00000487245 ZNF836Q6ZNA1 936 aa24.28■■□□□ 1.48
HLA-C-208ENST00000487245 RANBP3LQ86VV4 465 aaPredicted RBP24.28■■□□□ 1.48
HLA-C-208ENST00000487245 CDRT4Q8N9R6 151 aa24.28■■□□□ 1.48
HLA-C-208ENST00000487245 SYT14Q8NB59 555 aa24.28■■□□□ 1.48
HLA-C-208ENST00000487245 FAM3CQ92520 227 aa24.28■■□□□ 1.48
HLA-C-208ENST00000487245 ST6GAL2Q96JF0 529 aa24.28■■□□□ 1.48
HLA-C-208ENST00000487245 STACQ99469 402 aa24.28■■□□□ 1.48
HLA-C-208ENST00000487245 ZNF350Q9GZX5 532 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms