RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 PCED1BQ96HM7 432 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 RPGRIP1Q96KN7 1286 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 S1PR3Q99500 378 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 TDRD1Q9BXT4 1180 aaKnown RBP3.5□□□□□ -1.85
PTCD3-216ENST00000487043 PITPNM3Q9BZ71 974 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 EGLN1Q9GZT9 426 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 NACA2Q9H009 215 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 SLC26A1Q9H2B4 701 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 CSNK1G1Q9HCP0 422 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 S100A14Q9HCY8 104 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 IL20RAQ9UHF4 553 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 SNX12Q9UMY4 172 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 SAR1BQ9Y6B6 198 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 MYH10P35580 1976 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 ALPK3Q96L96 1907 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 BRCA2P51587 3418 aa3.5□□□□□ -1.85
PTCD3-216ENST00000487043 COL4A6Q14031 1691 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 MIF4GDA9UHW6 222 aaKnown RBP3.49□□□□□ -1.85
PTCD3-216ENST00000487043 HHLA1C9JL84 531 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 GOLGA8SH3BPF8 625 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 CLDN5O00501 218 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 CHEK1O14757 476 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 SIGLEC5O15389 551 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 P2RX6O15547 441 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 ADAM12O43184 909 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 LMX1BO60663 402 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 PROSCO94903 275 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 EML2O95834 649 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 TXNDC12O95881 172 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 LYNP07948 512 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 CD48P09326 243 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 FAM200BP0CF97 657 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 ERVK-10P10266 1014 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 TCP1P17987 556 aaKnown RBP3.49□□□□□ -1.85
PTCD3-216ENST00000487043 HLA-FP30511 346 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 MAGEA4P43358 317 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 CCR4P51679 360 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 MAP3K7CLP57077 242 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 CSNK2BP67870 215 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 PHEXP78562 749 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 DMTNQ08495 405 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 PIGHQ14442 188 aaPredicted RBP3.49□□□□□ -1.85
PTCD3-216ENST00000487043 KRT81Q14533 505 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 MESDQ14696 234 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 MPPE1Q53F39 396 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 SPANXN4Q5MJ08 99 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 STPG1Q5TH74 334 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 PLPP4Q5VZY2 271 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 RUSC1-AS1Q66K80 236 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 HIST2H2AA3Q6FI13 130 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 RTL6Q6ICC9 239 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 DNAJC24Q6P3W2 148 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 DCUN1D2Q6PH85 259 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 PTAR1Q7Z6K3 402 aaPredicted RBP3.49□□□□□ -1.85
PTCD3-216ENST00000487043 HOGA1Q86XE5 327 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 RNF148Q8N7C7 305 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 COLGALT1Q8NBJ5 622 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 ZNF540Q8NDQ6 660 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 OR6M1Q8NGM8 313 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 OR10G8Q8NGN5 311 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 JOSD2Q8TAC2 188 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 ZNF461Q8TAF7 563 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 SPPL2BQ8TCT7 592 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 C2orf15Q8WU43 125 aaKnown RBP3.49□□□□□ -1.85
PTCD3-216ENST00000487043 SMAP2Q8WU79 429 aaPredicted RBP3.49□□□□□ -1.85
PTCD3-216ENST00000487043 GATAD1Q8WUU5 269 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 SELENOMQ8WWX9 145 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 MYLPFQ96A32 169 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 SMARCD1Q96GM5 515 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 ZNF486Q96H40 463 aaPredicted RBP3.49□□□□□ -1.85
PTCD3-216ENST00000487043 PRAC1Q96KF2 57 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 MED10Q9BTT4 135 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 WWP1Q9H0M0 922 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 MMP28Q9H239 520 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 COQ10BQ9H8M1 238 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 ROPN1Q9HAT0 212 aaPredicted RBP3.49□□□□□ -1.85
PTCD3-216ENST00000487043 HPS4Q9NQG7 708 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 ZNF71Q9NQZ8 489 aaPredicted RBP3.49□□□□□ -1.85
PTCD3-216ENST00000487043 SLC35D1Q9NTN3 355 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 RNF14Q9UBS8 474 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 ANAPC7Q9UJX3 599 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 ENTPD4Q9Y227 616 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 HYOU1Q9Y4L1 999 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 ATG4BQ9Y4P1 393 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 TSC2P49815 1807 aa3.49□□□□□ -1.85
PTCD3-216ENST00000487043 VWA8A3KMH1 1905 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 PTPRSQ13332 1948 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 IGHV4-4A0A075B6R2 117 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 IGKV2D-30A0A075B6S6 120 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 A0A1W2PR80 420 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 SH3PXD2BA1X283 911 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 NKX6-3A6NJ46 265 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 YJEFN3A6XGL0 299 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 PMS2P5A8MQ11 134 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 TMEM110-MUSTN1A8MSY1 372 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 LMO7DNF2Z398 122 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 F8VP50 259 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 F8WDY8 70 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 BMPR1BO00238 502 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 SPOPO43791 374 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms