RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 BEND6Q5SZJ8 279 aaPredicted RBP11.67□□□□□ -0.54
CHMP3-208ENST00000486404 DCST2Q5T1A1 773 aa11.67□□□□□ -0.54
CHMP3-208ENST00000486404 OR4F3Q6IEY1 312 aa11.67□□□□□ -0.54
CHMP3-208ENST00000486404 CDC73Q6P1J9 531 aa11.67□□□□□ -0.54
CHMP3-208ENST00000486404 CAMKMTQ7Z624 323 aa11.67□□□□□ -0.54
CHMP3-208ENST00000486404 TMEM200AQ86VY9 491 aa11.67□□□□□ -0.54
CHMP3-208ENST00000486404 LIX1LQ8IVB5 337 aa11.67□□□□□ -0.54
CHMP3-208ENST00000486404 MISPQ8IVT2 679 aa11.67□□□□□ -0.54
CHMP3-208ENST00000486404 DMRTC2Q8IXT2 367 aaPredicted RBP11.67□□□□□ -0.54
CHMP3-208ENST00000486404 LRRC34Q8IZ02 419 aa11.67□□□□□ -0.54
CHMP3-208ENST00000486404 C9orf106Q8NAJ2 232 aa11.67□□□□□ -0.54
CHMP3-208ENST00000486404 RELL2Q8NC24 303 aaPredicted RBP11.67□□□□□ -0.54
CHMP3-208ENST00000486404 VPS37AQ8NEZ2 397 aa11.67□□□□□ -0.54
CHMP3-208ENST00000486404 GOT1L1Q8NHS2 421 aaPredicted RBP11.67□□□□□ -0.54
CHMP3-208ENST00000486404 PSMA8Q8TAA3 256 aa11.67□□□□□ -0.54
CHMP3-208ENST00000486404 RAB3IL1Q8TBN0 382 aa11.67□□□□□ -0.54
CHMP3-208ENST00000486404 SH3YL1Q96HL8 342 aaPredicted RBP11.67□□□□□ -0.54
CHMP3-208ENST00000486404 SLC35G5Q96KT7 338 aa11.67□□□□□ -0.54
CHMP3-208ENST00000486404 LURAP1Q96LR2 239 aa11.67□□□□□ -0.54
CHMP3-208ENST00000486404 ZFP3Q96NJ6 502 aa11.67□□□□□ -0.54
CHMP3-208ENST00000486404 PIGUQ9H490 435 aa11.67□□□□□ -0.54
CHMP3-208ENST00000486404 MEAF6Q9HAF1 191 aa11.67□□□□□ -0.54
CHMP3-208ENST00000486404 UBQLN4Q9NRR5 601 aa11.67□□□□□ -0.54
CHMP3-208ENST00000486404 PNPOQ9NVS9 261 aa11.67□□□□□ -0.54
CHMP3-208ENST00000486404 THAP1Q9NVV9 213 aa11.67□□□□□ -0.54
CHMP3-208ENST00000486404 ZNF629Q9UEG4 869 aaPredicted RBP11.67□□□□□ -0.54
CHMP3-208ENST00000486404 KCNN3Q9UGI6 736 aa11.67□□□□□ -0.54
CHMP3-208ENST00000486404 HAO1Q9UJM8 370 aa11.67□□□□□ -0.54
CHMP3-208ENST00000486404 VDAC3Q9Y277 283 aa11.67□□□□□ -0.54
CHMP3-208ENST00000486404 ANKHD1Q8IWZ3 2542 aaKnown RBP11.67□□□□□ -0.54
CHMP3-208ENST00000486404 UQCRHLA0A096LP55 91 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 SLC22A20A6NK97 555 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 ENO4A6NNW6 628 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 B4DXG7 233 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 H3BNH8 94 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 LINC01387J3KSC0 135 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 SOX30O94993 753 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 KITP10721 976 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 ZNF17P17021 662 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 TBXA2RP21731 343 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 CPA2P48052 419 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 WDR4P57081 412 aaKnown RBP11.66□□□□□ -0.54
CHMP3-208ENST00000486404 RPS26P62854 115 aaKnown RBP11.66□□□□□ -0.54
CHMP3-208ENST00000486404 HBA1P69905 142 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 CASP8Q14790 479 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 ANXA8L1Q5VT79 327 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 PPP4R4Q6NUP7 873 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 CLECL1Q8IZS7 167 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 ZNF295-AS1Q8N0V1 137 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 ZNF614Q8N883 585 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 ACBD4Q8NC06 268 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 OR5M1Q8NGP8 315 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 NUDT8Q8WV74 236 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 WNT2BQ93097 391 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 ZBTB18Q99592 522 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 TREX2Q9BQ50 279 aaPredicted RBP11.66□□□□□ -0.54
CHMP3-208ENST00000486404 SFXN3Q9BWM7 321 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 RTN4RQ9BZR6 473 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 TMBIM4Q9HC24 238 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 MCCC2Q9HCC0 563 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 GIN1Q9NXP7 522 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 CLCF1Q9UBD9 225 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 STOML1Q9UBI4 398 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 DCHS2Q6V1P9 2916 aa11.66□□□□□ -0.54
CHMP3-208ENST00000486404 A0A087WZY1 265 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 IGLV3-32A0A0A0MS00 114 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 OR2M5A3KFT3 312 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 E9PBE3 544 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 SLCO1B7G3V0H7 640 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 RNASET2O00584 256 aaKnown RBP11.65□□□□□ -0.54
CHMP3-208ENST00000486404 HDAC3O15379 428 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 HCRTR2O43614 444 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 ZIC3O60481 467 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 NUDT14O95848 222 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 IL18BPO95998 194 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 AGFG1P52594 562 aaKnown RBP11.65□□□□□ -0.54
CHMP3-208ENST00000486404 SLC18A1P54219 525 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 NME5P56597 212 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 B3GALT5-AS1P59052 145 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 RPS3AP61247 264 aaKnown RBP11.65□□□□□ -0.54
CHMP3-208ENST00000486404 BCL2A1Q16548 175 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 GLYR1Q49A26 553 aaPredicted RBP11.65□□□□□ -0.54
CHMP3-208ENST00000486404 FLYWCH1Q4VC44 716 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 EXOSC6Q5RKV6 272 aaKnown RBP11.65□□□□□ -0.54
CHMP3-208ENST00000486404 NXNQ6DKJ4 435 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 OGFOD2Q6N063 350 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 ARSKQ6UWY0 536 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 APOOLQ6UXV4 268 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 C16orf62Q7Z3J2 963 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 ZAR1Q86SH2 424 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 ANKRD46Q86W74 232 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 GCNT2Q8N0V5 402 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 TMCO5AQ8N6Q1 288 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 GOLGA6L1Q8N7Z2 621 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 OR8J2Q8NGG1 315 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 OR5D16Q8NGK9 328 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 OR4C3Q8NH37 302 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 FAM110BQ8TC76 370 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 PHOSPHO1Q8TCT1 267 aa11.65□□□□□ -0.54
CHMP3-208ENST00000486404 RNASE6Q93091 150 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms