RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 MEIOBQ8N635 442 aa15.97■□□□□ 0.15
COL6A1-204ENST00000486023 NATD1Q8N6N6 113 aa15.97■□□□□ 0.15
COL6A1-204ENST00000486023 MBD3L2Q8NHZ7 208 aaPredicted RBP15.97■□□□□ 0.15
COL6A1-204ENST00000486023 C1GALT1C1Q96EU7 318 aa15.97■□□□□ 0.15
COL6A1-204ENST00000486023 C14orf79Q96F83 325 aa15.97■□□□□ 0.15
COL6A1-204ENST00000486023 TM9SF2Q99805 663 aa15.97■□□□□ 0.15
COL6A1-204ENST00000486023 G6PC3Q9BUM1 346 aa15.97■□□□□ 0.15
COL6A1-204ENST00000486023 BTBD2Q9BX70 525 aa15.97■□□□□ 0.15
COL6A1-204ENST00000486023 ACTRT3Q9BYD9 372 aa15.97■□□□□ 0.15
COL6A1-204ENST00000486023 PIGUQ9H490 435 aa15.97■□□□□ 0.15
COL6A1-204ENST00000486023 MCCC2Q9HCC0 563 aa15.97■□□□□ 0.15
COL6A1-204ENST00000486023 NKIRAS1Q9NYS0 192 aa15.97■□□□□ 0.15
COL6A1-204ENST00000486023 PCDHGB4Q9UN71 923 aa15.97■□□□□ 0.15
COL6A1-204ENST00000486023 KCNE3Q9Y6H6 103 aa15.97■□□□□ 0.15
COL6A1-204ENST00000486023 GOLGA8QA0A0J9YX86 632 aa15.96■□□□□ 0.15
COL6A1-204ENST00000486023 GOLGA8OA6NCC3 632 aa15.96■□□□□ 0.15
COL6A1-204ENST00000486023 ENO4A6NNW6 628 aa15.96■□□□□ 0.15
COL6A1-204ENST00000486023 GOLGA8NF8WBI6 632 aa15.96■□□□□ 0.15
COL6A1-204ENST00000486023 ZNF708P17019 499 aa15.96■□□□□ 0.15
COL6A1-204ENST00000486023 LBPP18428 481 aa15.96■□□□□ 0.15
COL6A1-204ENST00000486023 OPRM1P35372 400 aa15.96■□□□□ 0.15
COL6A1-204ENST00000486023 KIR2DL3P43628 341 aa15.96■□□□□ 0.15
COL6A1-204ENST00000486023 ASCL1P50553 236 aa15.96■□□□□ 0.15
COL6A1-204ENST00000486023 SUCLG1P53597 346 aaKnown RBP15.96■□□□□ 0.15
COL6A1-204ENST00000486023 BEND6Q5SZJ8 279 aaPredicted RBP15.96■□□□□ 0.15
COL6A1-204ENST00000486023 CDC73Q6P1J9 531 aa15.96■□□□□ 0.15
COL6A1-204ENST00000486023 LUZP2Q86TE4 346 aa15.96■□□□□ 0.15
COL6A1-204ENST00000486023 ZNF614Q8N883 585 aa15.96■□□□□ 0.15
COL6A1-204ENST00000486023 ACBD4Q8NC06 268 aa15.96■□□□□ 0.15
COL6A1-204ENST00000486023 OR5D16Q8NGK9 328 aa15.96■□□□□ 0.15
COL6A1-204ENST00000486023 OR4A15Q8NGL6 344 aa15.96■□□□□ 0.15
COL6A1-204ENST00000486023 FAM110BQ8TC76 370 aa15.96■□□□□ 0.15
COL6A1-204ENST00000486023 HOXB13Q92826 284 aaPredicted RBP15.96■□□□□ 0.15
COL6A1-204ENST00000486023 PIGQQ9BRB3 760 aa15.96■□□□□ 0.15
COL6A1-204ENST00000486023 UBQLN4Q9NRR5 601 aa15.96■□□□□ 0.15
COL6A1-204ENST00000486023 ALG1L2C9J202 215 aa15.95■□□□□ 0.14
COL6A1-204ENST00000486023 SYT5O00445 386 aa15.95■□□□□ 0.14
COL6A1-204ENST00000486023 SNUPNO95149 360 aaKnown RBP15.95■□□□□ 0.14
COL6A1-204ENST00000486023 TGM6O95932 706 aa15.95■□□□□ 0.14
COL6A1-204ENST00000486023 CLDN20P56880 219 aa15.95■□□□□ 0.14
COL6A1-204ENST00000486023 GANABQ14697 944 aaKnown RBP15.95■□□□□ 0.14
COL6A1-204ENST00000486023 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.95■□□□□ 0.14
COL6A1-204ENST00000486023 SMU1Q2TAY7 513 aa15.95■□□□□ 0.14
COL6A1-204ENST00000486023 DCST2Q5T1A1 773 aa15.95■□□□□ 0.14
COL6A1-204ENST00000486023 NXNQ6DKJ4 435 aa15.95■□□□□ 0.14
COL6A1-204ENST00000486023 POMZP3Q6PJE2 187 aa15.95■□□□□ 0.14
COL6A1-204ENST00000486023 C6orf120Q7Z4R8 191 aa15.95■□□□□ 0.14
COL6A1-204ENST00000486023 PHOSPHO1Q8TCT1 267 aa15.95■□□□□ 0.14
COL6A1-204ENST00000486023 RNASE6Q93091 150 aaKnown RBP15.95■□□□□ 0.14
COL6A1-204ENST00000486023 WNT2BQ93097 391 aa15.95■□□□□ 0.14
COL6A1-204ENST00000486023 OR7D2Q96RA2 312 aa15.95■□□□□ 0.14
COL6A1-204ENST00000486023 STACQ99469 402 aa15.95■□□□□ 0.14
COL6A1-204ENST00000486023 TREX2Q9BQ50 279 aaPredicted RBP15.95■□□□□ 0.14
COL6A1-204ENST00000486023 WDR55Q9H6Y2 383 aaPredicted RBP15.95■□□□□ 0.14
COL6A1-204ENST00000486023 TMBIM4Q9HC24 238 aa15.95■□□□□ 0.14
COL6A1-204ENST00000486023 NEUROD4Q9HD90 331 aa15.95■□□□□ 0.14
COL6A1-204ENST00000486023 DUSP22Q9NRW4 184 aa15.95■□□□□ 0.14
COL6A1-204ENST00000486023 GPATCH2Q9NW75 528 aa15.95■□□□□ 0.14
COL6A1-204ENST00000486023 ASIC5Q9NY37 505 aa15.95■□□□□ 0.14
COL6A1-204ENST00000486023 L3MBTL1Q9Y468 752 aa15.95■□□□□ 0.14
COL6A1-204ENST00000486023 POLQO75417 2590 aa15.95■□□□□ 0.14
COL6A1-204ENST00000486023 RNF103-CHMP3A0A140T963 221 aa15.94■□□□□ 0.14
COL6A1-204ENST00000486023 SLC22A20A6NK97 555 aa15.94■□□□□ 0.14
COL6A1-204ENST00000486023 HCRTR2O43614 444 aa15.94■□□□□ 0.14
COL6A1-204ENST00000486023 RCBTB2O95199 551 aa15.94■□□□□ 0.14
COL6A1-204ENST00000486023 NUDT14O95848 222 aa15.94■□□□□ 0.14
COL6A1-204ENST00000486023 KRT16P08779 473 aa15.94■□□□□ 0.14
COL6A1-204ENST00000486023 MATN1P21941 496 aa15.94■□□□□ 0.14
COL6A1-204ENST00000486023 CPA2P48052 419 aa15.94■□□□□ 0.14
COL6A1-204ENST00000486023 BCL2A1Q16548 175 aa15.94■□□□□ 0.14
COL6A1-204ENST00000486023 SGCBQ16585 318 aa15.94■□□□□ 0.14
COL6A1-204ENST00000486023 FLYWCH1Q4VC44 716 aa15.94■□□□□ 0.14
COL6A1-204ENST00000486023 BHLHB9Q6PI77 547 aa15.94■□□□□ 0.14
COL6A1-204ENST00000486023 CNEP1R1Q8N9A8 125 aa15.94■□□□□ 0.14
COL6A1-204ENST00000486023 RFWD2Q8NHY2 731 aa15.94■□□□□ 0.14
COL6A1-204ENST00000486023 SFXN5Q8TD22 340 aa15.94■□□□□ 0.14
COL6A1-204ENST00000486023 MOAP1Q96BY2 351 aa15.94■□□□□ 0.14
COL6A1-204ENST00000486023 PINK1Q9BXM7 581 aa15.94■□□□□ 0.14
COL6A1-204ENST00000486023 MANSC1Q9H8J5 431 aa15.94■□□□□ 0.14
COL6A1-204ENST00000486023 THAP1Q9NVV9 213 aa15.94■□□□□ 0.14
COL6A1-204ENST00000486023 CLCF1Q9UBD9 225 aa15.94■□□□□ 0.14
COL6A1-204ENST00000486023 KCNN3Q9UGI6 736 aa15.94■□□□□ 0.14
COL6A1-204ENST00000486023 INTS1Q8N201 2190 aaKnown RBP15.93■□□□□ 0.14
COL6A1-204ENST00000486023 C9JVG2 144 aa15.93■□□□□ 0.14
COL6A1-204ENST00000486023 GTPBP1O00178 669 aaKnown RBP15.93■□□□□ 0.14
COL6A1-204ENST00000486023 EIF1AYO14602 144 aaKnown RBP15.93■□□□□ 0.14
COL6A1-204ENST00000486023 SMNDC1O75940 238 aaKnown RBP eCLIP15.93■□□□□ 0.14
COL6A1-204ENST00000486023 EPHA3P29320 983 aa15.93■□□□□ 0.14
COL6A1-204ENST00000486023 ZNF41P51814 821 aaPredicted RBP15.93■□□□□ 0.14
COL6A1-204ENST00000486023 EEFSECP57772 596 aaKnown RBP15.93■□□□□ 0.14
COL6A1-204ENST00000486023 SIRPAP78324 504 aa15.93■□□□□ 0.14
COL6A1-204ENST00000486023 CD226Q15762 336 aa15.93■□□□□ 0.14
COL6A1-204ENST00000486023 ATG16L1Q676U5 607 aa15.93■□□□□ 0.14
COL6A1-204ENST00000486023 OLIG3Q7RTU3 272 aa15.93■□□□□ 0.14
COL6A1-204ENST00000486023 WDR75Q8IWA0 830 aaKnown RBP15.93■□□□□ 0.14
COL6A1-204ENST00000486023 KIRREL3Q8IZU9 778 aa15.93■□□□□ 0.14
COL6A1-204ENST00000486023 VPS37AQ8NEZ2 397 aa15.93■□□□□ 0.14
COL6A1-204ENST00000486023 GOT1L1Q8NHS2 421 aaPredicted RBP15.93■□□□□ 0.14
COL6A1-204ENST00000486023 B4GALNT2Q8NHY0 566 aa15.93■□□□□ 0.14
COL6A1-204ENST00000486023 PSMA8Q8TAA3 256 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms