RNA–Protein interactions for RNA: ENST00000485494.1

SFMBT1-206, Transcript of Scm like with four mbt domains 1, humanhuman

TSL 5

Gene SFMBT1, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-206ENST00000485494 ZIC2O95409 532 aaPredicted RBP11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 ALPLP05186 524 aa11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 COX6A1P12074 109 aa11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 HPGDP15428 266 aa11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 IL12BP29460 328 aa11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 RRM2P31350 389 aa11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 IFNGR2P38484 337 aa11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 RAD23AP54725 363 aa11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 RGS8P57771 180 aaPredicted RBP11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 DAG1Q14118 895 aa11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 RTP5Q14D33 572 aa11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 CRTC2Q53ET0 693 aaPredicted RBP11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 KLHL26Q53HC5 615 aa11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 SWT1Q5T5J6 900 aaKnown RBP11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 TIPARPQ7Z3E1 657 aaKnown RBP11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 GALNT10Q86SR1 603 aa11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 DTX1Q86Y01 620 aa11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 LSMEM1Q8N8F7 131 aa11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 PHF10Q8WUB8 498 aaKnown RBP11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 CT55Q8WUE5 264 aa11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 PMEPA1Q969W9 287 aa11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 KIAA1143Q96AT1 154 aaPredicted RBP11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 SECISBP2Q96T21 854 aaKnown RBP11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 ZNF559Q9BR84 538 aa11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 COQ10BQ9H8M1 238 aa11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 KRCC1Q9NPI7 259 aaPredicted RBP11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 SMPD3Q9NY59 655 aaPredicted RBP11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 MYOTQ9UBF9 498 aa11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 TMCC3Q9ULS5 477 aa11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 LRCH1Q9Y2L9 728 aa11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 LYVE1Q9Y5Y7 322 aa11.88□□□□□ -0.51
SFMBT1-206ENST00000485494 PCNX3Q9H6A9 2034 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 NSG1A0A0A6YYJ2 146 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 A0A1W2PNU3 283 aaPredicted RBP11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 FAM149AA5PLN7 773 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 ALG1L2C9J202 215 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 H0YAE9 185 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 hCG_2039718K7EN88 272 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 TNFRSF11BO00300 401 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 DENRO43583 198 aaKnown RBP11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 EIF4E2O60573 245 aaKnown RBP11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 PPM1BO75688 479 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 H1F0P07305 194 aaKnown RBP11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 ADRB1P08588 477 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 ABCD3P28288 659 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 SLC6A8P48029 635 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 LIMS1P48059 325 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 GABREP78334 506 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 PPP2R2BQ00005 443 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 PLCXD2Q0VAA5 305 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 CHAF1BQ13112 559 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 MICAQ29983 383 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 MRPL2Q5T653 305 aaKnown RBP11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 WLSQ5T9L3 541 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 FAM199XQ6PEV8 388 aaPredicted RBP11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 ZNF613Q6PF04 617 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 FIGNL1Q6PIW4 674 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 KIRREL2Q6UWL6 708 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 ZNF836Q6ZNA1 936 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 SHISA6Q6ZSJ9 500 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 NUP54Q7Z3B4 507 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 WDR53Q7Z5U6 358 aaPredicted RBP11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 CBR4Q8N4T8 237 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 FAM71CQ8NEG0 241 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 OR11G2Q8NGC1 345 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 TMCO6Q96DC7 493 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 GAL3ST4Q96RP7 486 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 FNDC11Q9BVV2 318 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 DEFB126Q9BYW3 111 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 TRIM2Q9C040 744 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 ACER3Q9NUN7 267 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 FOXJ2Q9P0K8 574 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 NPFFR2Q9Y5X5 522 aa11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 TPRP12270 2363 aaKnown RBP11.87□□□□□ -0.51
SFMBT1-206ENST00000485494 TRBV11-1A0A0K0K1C0 115 aa11.86□□□□□ -0.51
SFMBT1-206ENST00000485494 SERINC4A6NH21 518 aa11.86□□□□□ -0.51
SFMBT1-206ENST00000485494 PEX12O00623 359 aa11.86□□□□□ -0.51
SFMBT1-206ENST00000485494 SOCS6O14544 535 aa11.86□□□□□ -0.51
SFMBT1-206ENST00000485494 LIPCP11150 499 aa11.86□□□□□ -0.51
SFMBT1-206ENST00000485494 DLSTP36957 453 aa11.86□□□□□ -0.51
SFMBT1-206ENST00000485494 OR1E2P47887 323 aa11.86□□□□□ -0.51
SFMBT1-206ENST00000485494 NR0B1P51843 470 aaKnown RBP11.86□□□□□ -0.51
SFMBT1-206ENST00000485494 SPIBQ01892 262 aa11.86□□□□□ -0.51
SFMBT1-206ENST00000485494 COX10Q12887 443 aa11.86□□□□□ -0.51
SFMBT1-206ENST00000485494 SNTA1Q13424 505 aa11.86□□□□□ -0.51
SFMBT1-206ENST00000485494 IL18R1Q13478 541 aa11.86□□□□□ -0.51
SFMBT1-206ENST00000485494 TRAM2Q15035 370 aa11.86□□□□□ -0.51
SFMBT1-206ENST00000485494 CCNJQ5T5M9 372 aa11.86□□□□□ -0.51
SFMBT1-206ENST00000485494 FAAH2Q6GMR7 532 aa11.86□□□□□ -0.51
SFMBT1-206ENST00000485494 FAHD1Q6P587 224 aa11.86□□□□□ -0.51
SFMBT1-206ENST00000485494 TSEN54Q7Z6J9 526 aaKnown RBP11.86□□□□□ -0.51
SFMBT1-206ENST00000485494 STK32CQ86UX6 486 aa11.86□□□□□ -0.51
SFMBT1-206ENST00000485494 VRK2Q86Y07 508 aa11.86□□□□□ -0.51
SFMBT1-206ENST00000485494 EPHX4Q8IUS5 362 aa11.86□□□□□ -0.51
SFMBT1-206ENST00000485494 GPALPP1Q8IXQ4 340 aa11.86□□□□□ -0.51
SFMBT1-206ENST00000485494 RNF113BQ8IZP6 322 aaKnown RBP11.86□□□□□ -0.51
SFMBT1-206ENST00000485494 OR4C15Q8NGM1 316 aa11.86□□□□□ -0.51
SFMBT1-206ENST00000485494 OR6T1Q8NGN1 323 aa11.86□□□□□ -0.51
SFMBT1-206ENST00000485494 GIPC3Q8TF64 312 aa11.86□□□□□ -0.51
SFMBT1-206ENST00000485494 DNAJA4Q8WW22 397 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms