RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 XCR1P46094 333 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 RPL5P46777 297 aaKnown RBP6.42□□□□□ -1.38
BRCA1-216ENST00000484087 IST1P53990 364 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 RAB38P57729 211 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 MYBPC1Q00872 1141 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 RUNX2Q13950 521 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 SSPNQ14714 243 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 FAM214AQ32MH5 1076 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 B3GNTL1Q67FW5 361 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-216ENST00000484087 ZCCHC12Q6PEW1 402 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 C16orf62Q7Z3J2 963 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 LGI4Q8N135 537 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 ZNF786Q8N393 782 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 GALNT16Q8N428 558 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 SMYD1Q8NB12 490 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 C7orf57Q8NEG2 295 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 TSPAN14Q8NG11 270 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 OR11G2Q8NGC1 345 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 OR5D16Q8NGK9 328 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 GIPC3Q8TF64 312 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 PHF10Q8WUB8 498 aaKnown RBP6.42□□□□□ -1.38
BRCA1-216ENST00000484087 THAP4Q8WY91 577 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 FKBP10Q96AY3 582 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 C7orf34Q96L11 122 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 ZNF354BQ96LW1 612 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 DMRTB1Q96MA1 342 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 COL21A1Q96P44 957 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 OR7D2Q96RA2 312 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 PIP5K1AQ99755 562 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 TREX2Q9BQ50 279 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-216ENST00000484087 SAP130Q9H0E3 1048 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 ADNPQ9H2P0 1102 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 ZNF556Q9HAH1 456 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 SMURF2Q9HAU4 748 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 BCL2L10Q9HD36 194 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 KRT84Q9NSB2 600 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 TUBA8Q9NY65 449 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-216ENST00000484087 NDUFAF4Q9P032 175 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 BLOC1S6Q9UL45 172 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 MKL2Q9ULH7 1088 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 TMCC3Q9ULS5 477 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 SLC9A8Q9Y2E8 581 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 TESMINQ9Y4I5 508 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 ENPP4Q9Y6X5 453 aa6.42□□□□□ -1.38
BRCA1-216ENST00000484087 A0A087WXM4 84 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 LOC100130705A0A1B0GUX0 176 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 SMIM31A0A1B0GVY4 71 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 WASHC1A8K0Z3 465 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 A8MVJ9 347 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 FAM227AF5H4B4 570 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 H3BNH8 94 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 PEX12O00623 359 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 OR10H2O60403 315 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 COQ9O75208 318 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 GCM2O75603 506 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-216ENST00000484087 DIRAS1O95057 198 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 MFN2O95140 757 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 GADD45GO95257 159 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 FESP07332 822 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 HEXBP07686 556 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 ITGAMP11215 1152 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 ATP6V1B1P15313 513 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 MMP11P24347 488 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 EIF1AXP47813 144 aaKnown RBP6.41□□□□□ -1.38
BRCA1-216ENST00000484087 OR1E2P47887 323 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 UQCRFS1P47985 274 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 PGDP52209 483 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 CRYBA2P53672 197 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 NR1H2P55055 460 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 CDH12P55289 794 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 ESRRGP62508 458 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 TUBA4AP68366 448 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 OCA2Q04671 838 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 PPP1R8Q12972 351 aaKnown RBP6.41□□□□□ -1.38
BRCA1-216ENST00000484087 BIKQ13323 160 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 TOP3AQ13472 1001 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-216ENST00000484087 FAM53BQ14153 422 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 SYPL1Q16563 259 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 ZNF750Q32MQ0 723 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 RPS26P11Q5JNZ5 115 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-216ENST00000484087 FCRLBQ6BAA4 426 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 TCTN3Q6NUS6 607 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 CDC73Q6P1J9 531 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 LINC00696Q6ZRV3 163 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 THAP5Q7Z6K1 395 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 OFCC1Q8IZS5 231 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 HS3ST5Q8IZT8 346 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 CA13Q8N1Q1 262 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 SIRT6Q8N6T7 355 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 RBMXL3Q8N7X1 1067 aaKnown RBP6.41□□□□□ -1.38
BRCA1-216ENST00000484087 Q8NA96 180 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 TMEM52Q8NDY8 209 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 PIK3C3Q8NEB9 887 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 OR51Q1Q8NH59 317 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 NR4A3Q92570 626 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 KAT2AQ92830 837 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 FBXL20Q96IG2 436 aa6.41□□□□□ -1.38
BRCA1-216ENST00000484087 THOC3Q96J01 351 aaKnown RBP6.41□□□□□ -1.38
BRCA1-216ENST00000484087 TRNT1Q96Q11 434 aaKnown RBP6.41□□□□□ -1.38
BRCA1-216ENST00000484087 CSF3RQ99062 836 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms