RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 APOOQ9BUR5 198 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 BTBD2Q9BX70 525 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 RACGAP1Q9H0H5 632 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 C8orf33Q9H7E9 229 aaPredicted RBP7.21□□□□□ -1.26
SNX13-208ENST00000482558 SLC28A3Q9HAS3 691 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 MRPS30Q9NP92 439 aaKnown RBP7.21□□□□□ -1.26
SNX13-208ENST00000482558 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.21□□□□□ -1.262e-7■■■■■ 54.7
SNX13-208ENST00000482558 CALML5Q9NZT1 146 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 KCMF1Q9P0J7 381 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 TAAR2Q9P1P5 351 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 ANKMY1Q9P2S6 941 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 P2RX2Q9UBL9 471 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 SLC25A10Q9UBX3 287 aaPredicted RBP7.21□□□□□ -1.26
SNX13-208ENST00000482558 SLC23A2Q9UGH3 650 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 ERVK-11Q9UQG0 969 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 U3KQV3 271 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 CKAP5Q14008 2032 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 PRRC2BQ5JSZ5 2229 aaKnown RBP7.21□□□□□ -1.26
SNX13-208ENST00000482558 A0A0A6YYD5 115 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 A0A1B0GTW7 788 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 LOC102723971A0A1B0GUV8 181 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 A0A1W2PPV9 198 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 LRIT2A6NDA9 550 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 OR2W5A6NFC9 320 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 PLK4O00444 970 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 PRICKLE3O43900 615 aaPredicted RBP7.2□□□□□ -1.26
SNX13-208ENST00000482558 SOX30O94993 753 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 CCNB2O95067 398 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 ADAP00813 363 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 IFI6P09912 130 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 CDK4P11802 303 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 PRKACGP22612 351 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 IFNA8P32881 189 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 GGT2P36268 569 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 NUDT1P36639 197 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 SSR2P43308 183 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 XCR1P46094 333 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 CLK3P49761 638 aaKnown RBP7.2□□□□□ -1.26
SNX13-208ENST00000482558 KHKP50053 298 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 UCP3P55916 312 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 CDC42P60953 191 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 RPS15AP62244 130 aaKnown RBP7.2□□□□□ -1.26
SNX13-208ENST00000482558 TUBA1BP68363 451 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 RPP38P78345 283 aaKnown RBP7.2□□□□□ -1.26
SNX13-208ENST00000482558 SPIBQ01892 262 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 OCA2Q04671 838 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 RGS1Q08116 209 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 DBPQ10586 325 aaPredicted RBP7.2□□□□□ -1.26
SNX13-208ENST00000482558 NFATC3Q12968 1075 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 RAPSNQ13702 412 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 NPTX1Q15818 432 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 ZIC1Q15915 447 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 NDUFA9Q16795 377 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 COLEC12Q5KU26 742 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 SYT6Q5T7P8 510 aaPredicted RBP7.2□□□□□ -1.26
SNX13-208ENST00000482558 CD276Q5ZPR3 534 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 SYCE2Q6PIF2 218 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 ISLR2Q6UXK2 745 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 CEACAM20Q6UY09 585 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 TUBA1AQ71U36 451 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 C6orf120Q7Z4R8 191 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 TRIM69Q86WT6 500 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 LINC00346Q8IVM7 164 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 HS3ST5Q8IZT8 346 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 MFSD9Q8NBP5 474 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 BPIFB6Q8NFQ5 453 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 OR2L5Q8NG80 312 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 OR56A1Q8NGH5 318 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 OR4C15Q8NGM1 316 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 BBS10Q8TAM1 723 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 MIPOL1Q8TD10 442 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 PHF10Q8WUB8 498 aaKnown RBP7.2□□□□□ -1.26
SNX13-208ENST00000482558 TRUB1Q8WWH5 349 aaKnown RBP7.2□□□□□ -1.26
SNX13-208ENST00000482558 S100ZQ8WXG8 99 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 TAMM41Q96BW9 452 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 Q96MT0 163 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 CMTM3Q96MX0 182 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 PRAP1Q96NZ9 151 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 IL17FQ96PD4 163 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 OR2M4Q96R27 311 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 F2RL3Q96RI0 385 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 ZNF717Q9BY31 904 aaPredicted RBP7.2□□□□□ -1.26
SNX13-208ENST00000482558 MS4A7Q9GZW8 240 aaPredicted RBP7.2□□□□□ -1.26
SNX13-208ENST00000482558 UNKLQ9H9P5 680 aaKnown RBP7.2□□□□□ -1.26
SNX13-208ENST00000482558 BCL2L10Q9HD36 194 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 LTB4R2Q9NPC1 389 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 LANCL2Q9NS86 450 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 BEX4Q9NWD9 120 aaPredicted RBP7.2□□□□□ -1.26
SNX13-208ENST00000482558 WARS2Q9UGM6 360 aaKnown RBP7.2□□□□□ -1.26
SNX13-208ENST00000482558 ENPP5Q9UJA9 477 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 UTS2RQ9UKP6 389 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 MGAT4BQ9UQ53 548 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 SH2B3Q9UQQ2 575 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 PLEKHM1Q9Y4G2 1056 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 ALPK3Q96L96 1907 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 C2orf16Q68DN1 1984 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 TRPM6Q9BX84 2022 aa7.2□□□□□ -1.26
SNX13-208ENST00000482558 PDE4DIPQ5VU43 2346 aa7.19□□□□□ -1.26
SNX13-208ENST00000482558 TBC1D3DA0A087WVF3 549 aa7.19□□□□□ -1.26
SNX13-208ENST00000482558 TBC1D3IA0A087WXS9 549 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms