RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 INTS12Q96CB8 462 aaKnown RBP9.97□□□□□ -0.81
SIK3-210ENST00000480468 PRRC1Q96M27 445 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 PITHD1Q9GZP4 211 aaPredicted RBP9.97□□□□□ -0.81
SIK3-210ENST00000480468 EGLN3Q9H6Z9 239 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 DDX31Q9H8H2 851 aaKnown RBP9.97□□□□□ -0.81
SIK3-210ENST00000480468 TRIM36Q9NQ86 728 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 OPN4Q9UHM6 478 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 FLVCR2Q9UPI3 526 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 TRAV1-2A0A0B4J238 106 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 GNB5O14775 395 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 SURF4O15260 269 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 ARPC5O15511 151 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 B4GALT3O60512 393 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 ATG12O94817 140 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 OLFM2O95897 454 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 ZDHHC11BP0C7U3 371 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 VIPR1P32241 457 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 PSEN2P49810 448 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 MAT1AQ00266 395 aaKnown RBP9.97□□□□□ -0.81
SIK3-210ENST00000480468 MC1RQ01726 317 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 TAF10Q12962 218 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 MAPK14Q16539 360 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 SYTL3Q4VX76 610 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 HENMT1Q5T8I9 393 aaKnown RBP9.97□□□□□ -0.81
SIK3-210ENST00000480468 OLFML2AQ68BL7 652 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 ZNF783Q6ZMS7 281 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 VRK3Q8IV63 474 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 CCDC36Q8IYA8 594 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 APCDD1Q8J025 514 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 SLC22A8Q8TCC7 542 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 THEM6Q8WUY1 208 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 OR10A4Q9H209 315 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 CXorf36Q9H7Y0 433 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 BARX1Q9HBU1 254 aaPredicted RBP9.97□□□□□ -0.81
SIK3-210ENST00000480468 TINAGQ9UJW2 476 aa9.97□□□□□ -0.81
SIK3-210ENST00000480468 SIRT4Q9Y6E7 314 aaPredicted RBP9.97□□□□□ -0.81
SIK3-210ENST00000480468 A0A1B0GTQ1 180 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 ADM5C9JUS6 153 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 TEX46H3BTG2 121 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 ARPC1BO15143 372 aaKnown RBP9.96□□□□□ -0.82
SIK3-210ENST00000480468 PLPP2O43688 288 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 STX11O75558 287 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 CDC123O75794 336 aaPredicted RBP9.96□□□□□ -0.82
SIK3-210ENST00000480468 OAZ2O95190 189 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 CLDN7O95471 211 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 EGFP01133 1207 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 UBBP0CG47 229 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 UBCP0CG48 685 aaKnown RBP9.96□□□□□ -0.82
SIK3-210ENST00000480468 RPA2P15927 270 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 RAB3BP20337 219 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 MPGP29372 298 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 RAD52P43351 418 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 RHOAP61586 193 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 RPS27AP62979 156 aaKnown RBP9.96□□□□□ -0.82
SIK3-210ENST00000480468 UBA52P62987 128 aaKnown RBP9.96□□□□□ -0.82
SIK3-210ENST00000480468 ERVK-25P63136 954 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 IL10RAQ13651 578 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 SLC25A35Q3KQZ1 300 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 RNASE12Q5GAN4 147 aaKnown RBP9.96□□□□□ -0.82
SIK3-210ENST00000480468 RNF219Q5W0B1 726 aaPredicted RBP9.96□□□□□ -0.82
SIK3-210ENST00000480468 SFRP4Q6FHJ7 346 aaPredicted RBP9.96□□□□□ -0.82
SIK3-210ENST00000480468 SLC25A25Q6KCM7 469 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 MED27Q6P2C8 311 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 ACBD7Q8N6N7 88 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 BPIFCQ8NFQ6 507 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 OR6S1Q8NH40 331 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 SETD7Q8WTS6 366 aaKnown RBP9.96□□□□□ -0.82
SIK3-210ENST00000480468 NR4A3Q92570 626 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 ECHDC3Q96DC8 303 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 NARS2Q96I59 477 aaKnown RBP9.96□□□□□ -0.82
SIK3-210ENST00000480468 WFDC6Q9BQY6 131 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 GSDMCQ9BYG8 508 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 CWH43Q9H720 699 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 CTPS2Q9NRF8 586 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 RASL12Q9NYN1 266 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 ZNF69Q9UC07 566 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 MRTO4Q9UKD2 239 aaKnown RBP9.96□□□□□ -0.82
SIK3-210ENST00000480468 ERVK-19Q9WJR5 959 aa9.96□□□□□ -0.82
SIK3-210ENST00000480468 HELZP42694 1942 aaKnown RBP9.96□□□□□ -0.82
SIK3-210ENST00000480468 GOLGB1Q14789 3259 aaKnown RBP9.95□□□□□ -0.82
SIK3-210ENST00000480468 GSAPA4D1B5 854 aa9.95□□□□□ -0.82
SIK3-210ENST00000480468 OR6C75A6NL08 312 aa9.95□□□□□ -0.82
SIK3-210ENST00000480468 CHURC1-FNTBB4DL54 471 aa9.95□□□□□ -0.82
SIK3-210ENST00000480468 ANHXE9PGG2 379 aa9.95□□□□□ -0.82
SIK3-210ENST00000480468 GATCO43716 136 aaKnown RBP9.95□□□□□ -0.82
SIK3-210ENST00000480468 REM1O75628 298 aa9.95□□□□□ -0.82
SIK3-210ENST00000480468 SIX6O95475 246 aa9.95□□□□□ -0.82
SIK3-210ENST00000480468 POMCP01189 267 aa9.95□□□□□ -0.82
SIK3-210ENST00000480468 FABP1P07148 127 aa9.95□□□□□ -0.82
SIK3-210ENST00000480468 DPEP1P16444 411 aa9.95□□□□□ -0.82
SIK3-210ENST00000480468 MST1P26927 711 aa9.95□□□□□ -0.82
SIK3-210ENST00000480468 GRK4P32298 578 aa9.95□□□□□ -0.82
SIK3-210ENST00000480468 HNF1BP35680 557 aa9.95□□□□□ -0.82
SIK3-210ENST00000480468 ATP6V1E1P36543 226 aa9.95□□□□□ -0.82
SIK3-210ENST00000480468 CAPZA2P47755 286 aa9.95□□□□□ -0.82
SIK3-210ENST00000480468 TAS2R43P59537 309 aa9.95□□□□□ -0.82
SIK3-210ENST00000480468 GMFBP60983 142 aa9.95□□□□□ -0.82
SIK3-210ENST00000480468 SIM1P81133 766 aaPredicted RBP9.95□□□□□ -0.82
SIK3-210ENST00000480468 LGALS3BPQ08380 585 aa9.95□□□□□ -0.82
SIK3-210ENST00000480468 PRSS53Q2L4Q9 553 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms