RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 CD1EP15812 388 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 ACVR1BP36896 505 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 REEP5Q00765 189 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 APOFQ13790 326 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 METRNLQ641Q3 311 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 RASGRP3Q8IV61 690 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 UBQLNLQ8IYU4 475 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 OR2T35Q8NGX2 323 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 OR2AJ1Q8NGZ0 328 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 ASB15Q8WXK1 588 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 NSMAFQ92636 917 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 MUL1Q969V5 352 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 HRASLS5Q96KN8 279 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 METTL8Q9H825 291 aaKnown RBP13.47□□□□□ -0.25
COL20A1-206ENST00000479501 CPNE7Q9UBL6 633 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 MGAT4CQ9UBM8 478 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 CSNK1G3Q9Y6M4 447 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 C9J4A7 227 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 RGS6P49758 472 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 GAB1Q13480 694 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 ODF4Q2M2E3 257 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 TCTE1Q5JU00 501 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 TECPR1Q7Z6L1 1165 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 OR6N2Q8NGY6 317 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 ADAMTS18Q8TE60 1221 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 CREB3L4Q8TEY5 395 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 COQ8BQ96D53 544 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 NEURL3Q96EH8 262 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 OR4K3Q96R72 315 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 ALOXE3Q9BYJ1 711 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 PRRG4Q9BZD6 226 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 SAP130Q9H0E3 1048 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 TMEM38AQ9H6F2 299 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 OBP2AQ9NY56 170 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 NDUFAF4Q9P032 175 aa13.47□□□□□ -0.25
COL20A1-206ENST00000479501 RBMXL2O75526 392 aaKnown RBP13.46□□□□□ -0.25
COL20A1-206ENST00000479501 CSNK1G2P78368 415 aa13.46□□□□□ -0.25
COL20A1-206ENST00000479501 LRRC37A5PQ49AS3 106 aa13.46□□□□□ -0.25
COL20A1-206ENST00000479501 FTMTQ8N4E7 242 aa13.46□□□□□ -0.25
COL20A1-206ENST00000479501 VN1R2Q8NFZ6 395 aa13.46□□□□□ -0.25
COL20A1-206ENST00000479501 OR52E2Q8NGJ4 325 aa13.46□□□□□ -0.25
COL20A1-206ENST00000479501 ARID1BQ8NFD5 2236 aaPredicted RBP13.46□□□□□ -0.25
COL20A1-206ENST00000479501 A0A0A6YYC8 382 aaPredicted RBP13.46□□□□□ -0.25
COL20A1-206ENST00000479501 TRBV4-1A0A0J9YWV2 114 aa13.46□□□□□ -0.25
COL20A1-206ENST00000479501 MEIOCA2RUB1 952 aa13.46□□□□□ -0.25
COL20A1-206ENST00000479501 NPIPA5E9PKD4 350 aa13.46□□□□□ -0.25
COL20A1-206ENST00000479501 I3L1I5 382 aaPredicted RBP13.46□□□□□ -0.25
COL20A1-206ENST00000479501 LYRM1O43325 122 aa13.46□□□□□ -0.25
COL20A1-206ENST00000479501 PRKYO43930 277 aa13.46□□□□□ -0.25
COL20A1-206ENST00000479501 GASTP01350 101 aa13.46□□□□□ -0.25
COL20A1-206ENST00000479501 TNFRSF4P43489 277 aa13.46□□□□□ -0.25
COL20A1-206ENST00000479501 B4GALNT1Q00973 533 aa13.46□□□□□ -0.25
COL20A1-206ENST00000479501 CHRNEQ04844 493 aa13.46□□□□□ -0.25
COL20A1-206ENST00000479501 DPTQ07507 201 aa13.46□□□□□ -0.25
COL20A1-206ENST00000479501 TRAM1Q15629 374 aa13.46□□□□□ -0.25
COL20A1-206ENST00000479501 ASTLQ6HA08 431 aaPredicted RBP13.46□□□□□ -0.25
COL20A1-206ENST00000479501 ZNF619Q8N2I2 560 aa13.46□□□□□ -0.25
COL20A1-206ENST00000479501 DNAJC22Q8N4W6 341 aa13.46□□□□□ -0.25
COL20A1-206ENST00000479501 POGLUT1Q8NBL1 392 aa13.46□□□□□ -0.25
COL20A1-206ENST00000479501 FCAMRQ8WWV6 532 aa13.46□□□□□ -0.25
COL20A1-206ENST00000479501 TMEM121BQ9BXQ6 578 aaPredicted RBP13.46□□□□□ -0.25
COL20A1-206ENST00000479501 ATPIF1Q9UII2 106 aa13.46□□□□□ -0.25
COL20A1-206ENST00000479501 CA14Q9ULX7 337 aa13.46□□□□□ -0.25
COL20A1-206ENST00000479501 NPIPA1Q9UND3 350 aa13.46□□□□□ -0.25
COL20A1-206ENST00000479501 SH2B3Q9UQQ2 575 aa13.46□□□□□ -0.25
COL20A1-206ENST00000479501 ZNF726A6NNF4 738 aa13.46□□□□□ -0.26
COL20A1-206ENST00000479501 C11orf98E9PRG8 122 aa13.46□□□□□ -0.26
COL20A1-206ENST00000479501 F5H0A9 414 aaPredicted RBP13.46□□□□□ -0.26
COL20A1-206ENST00000479501 H3BSH0 61 aa13.46□□□□□ -0.26
COL20A1-206ENST00000479501 SGK494L7N484 410 aa13.46□□□□□ -0.26
COL20A1-206ENST00000479501 PLPP1O14494 284 aa13.46□□□□□ -0.26
COL20A1-206ENST00000479501 DUX1O43812 170 aa13.46□□□□□ -0.26
COL20A1-206ENST00000479501 PRR35P0CG20 571 aa13.46□□□□□ -0.26
COL20A1-206ENST00000479501 SOX3P41225 446 aa13.46□□□□□ -0.26
COL20A1-206ENST00000479501 BCL2L15Q5TBC7 163 aa13.46□□□□□ -0.26
COL20A1-206ENST00000479501 SPATC1Q76KD6 591 aa13.46□□□□□ -0.26
COL20A1-206ENST00000479501 VRK2Q86Y07 508 aa13.46□□□□□ -0.26
COL20A1-206ENST00000479501 JAGN1Q8N5M9 183 aa13.46□□□□□ -0.26
COL20A1-206ENST00000479501 OR4K13Q8NH42 304 aa13.46□□□□□ -0.26
COL20A1-206ENST00000479501 TOE1Q96GM8 510 aaKnown RBP13.46□□□□□ -0.26
COL20A1-206ENST00000479501 SAV1Q9H4B6 383 aaPredicted RBP13.46□□□□□ -0.26
COL20A1-206ENST00000479501 SRA1Q9HD15 236 aaKnown RBP13.46□□□□□ -0.26
COL20A1-206ENST00000479501 SCP2D1Q9UJQ7 156 aa13.46□□□□□ -0.26
COL20A1-206ENST00000479501 NEU3Q9UQ49 428 aa13.46□□□□□ -0.26
COL20A1-206ENST00000479501 A0A1W2PPK0 400 aa13.45□□□□□ -0.26
COL20A1-206ENST00000479501 RNF13O43567 381 aa13.45□□□□□ -0.26
COL20A1-206ENST00000479501 KLK3P07288 261 aaPredicted RBP13.45□□□□□ -0.26
COL20A1-206ENST00000479501 GKN3PP0CG01 181 aa13.45□□□□□ -0.26
COL20A1-206ENST00000479501 MAPK3P27361 379 aaPredicted RBP13.45□□□□□ -0.26
COL20A1-206ENST00000479501 SOX2P48431 317 aa13.45□□□□□ -0.26
COL20A1-206ENST00000479501 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.45□□□□□ -0.26
COL20A1-206ENST00000479501 GFOD2Q3B7J2 385 aa13.45□□□□□ -0.26
COL20A1-206ENST00000479501 CCNJQ5T5M9 372 aa13.45□□□□□ -0.26
COL20A1-206ENST00000479501 ZNF440Q8IYI8 595 aa13.45□□□□□ -0.26
COL20A1-206ENST00000479501 PM20D2Q8IYS1 436 aa13.45□□□□□ -0.26
COL20A1-206ENST00000479501 TMEM239Q8WW34 195 aa13.45□□□□□ -0.26
COL20A1-206ENST00000479501 RPL3LQ92901 407 aaKnown RBP13.45□□□□□ -0.26
COL20A1-206ENST00000479501 ALG14Q96F25 216 aa13.45□□□□□ -0.26
COL20A1-206ENST00000479501 CCDC120Q96HB5 630 aa13.45□□□□□ -0.26
COL20A1-206ENST00000479501 TMEM168Q9H0V1 697 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms