RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 HCN1O60741 890 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 TNFRSF21O75509 655 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 STX11O75558 287 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 CBR3O75828 277 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 KRT75O95678 551 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 AGR2O95994 175 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 AK1P00568 194 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 HPNP05981 417 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 NGFRP08138 427 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 ZCCHC18P0CG32 403 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 ETFAP13804 333 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 HOXB9P17482 250 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-222ENST00000478095 TBXA2RP21731 343 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 CA7P43166 264 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 CASP6P55212 293 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 HPCAP84074 193 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 SYPL1Q16563 259 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 NDUFAF6Q330K2 333 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 ARHGAP11BQ3KRB8 267 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 LINC01559Q495D7 138 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 GPAT3Q53EU6 434 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 HEPHL1Q6MZM0 1159 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 NCCRP1Q6ZVX7 275 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-222ENST00000478095 SPATA21Q7Z572 469 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 FAM26EQ8N5C1 309 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 ANKFN1Q8N957 763 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 OR2M3Q8NG83 312 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 NEIL3Q8TAT5 605 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 FAM57AQ8TBR7 257 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 KLHDC3Q9BQ90 382 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 NMUR2Q9GZQ4 415 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 ZNF350Q9GZX5 532 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 ACKR4Q9NPB9 350 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 SAR1AQ9NR31 198 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 SDHAF3Q9NRP4 125 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 PNPLA3Q9NST1 481 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 TMEM45AQ9NWC5 275 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 TAS2R10Q9NYW0 307 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 ARMCX1Q9P291 453 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 LEF1Q9UJU2 399 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-222ENST00000478095 ACAD8Q9UKU7 415 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 SLC5A6Q9Y289 635 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 RPH3AQ9Y2J0 694 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-222ENST00000478095 WDR45Q9Y484 360 aa9.34□□□□□ -0.91
HDAC6-222ENST00000478095 CROCCQ5TZA2 2017 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 SHISA8B8ZZ34 492 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 CLIC1O00299 241 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 CCL21O00585 134 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 AQP7O14520 342 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 PRRG2O14669 202 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 ANGPT2O15123 496 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 OIP5O43482 229 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 KIAA0513O60268 411 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 SUSD5O60279 629 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 SOX30O94993 753 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 H6PDO95479 791 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 CHRM4P08173 479 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 SNRPB2P08579 225 aaKnown RBP9.33□□□□□ -0.92
HDAC6-222ENST00000478095 NR2F1P10589 423 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 DRD4P21917 467 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 DPP4P27487 766 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 LCN1P31025 176 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 SRD5A2P31213 254 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 ANXA11P50995 505 aaKnown RBP9.33□□□□□ -0.92
HDAC6-222ENST00000478095 ATP12AP54707 1039 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 DSTNP60981 165 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 CHRNEQ04844 493 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 C17orf67Q0P5P2 114 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 KLF10Q13118 480 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 C4orf17Q53FE4 359 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 KLHL26Q53HC5 615 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 EMC4Q5J8M3 183 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 DCST1Q5T197 706 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 PDZK1Q5T2W1 519 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 LRIF1Q5T3J3 769 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 TYW3Q6IPR3 259 aaKnown RBP9.33□□□□□ -0.92
HDAC6-222ENST00000478095 ZNF585AQ6P3V2 769 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 ARSKQ6UWY0 536 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 FRRS1Q6ZNA5 592 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 Q6ZPB1 254 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-222ENST00000478095 DHDDSQ86SQ9 333 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 DOLPP1Q86YN1 238 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 RPRMLQ8N4K4 120 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 FADS6Q8N9I5 356 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 ZNF527Q8NB42 609 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 OR5M1Q8NGP8 315 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 PHOSPHO1Q8TCT1 267 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 ARSGQ96EG1 525 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 TRIM8Q9BZR9 551 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 OR2B2Q9GZK3 357 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 HOXD1Q9GZZ0 328 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 QRSL1Q9H0R6 528 aaKnown RBP9.33□□□□□ -0.92
HDAC6-222ENST00000478095 ALKBH4Q9NXW9 302 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 VAPAQ9P0L0 249 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-222ENST00000478095 KCNE5Q9UJ90 142 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 NDUFAF1Q9Y375 327 aa9.33□□□□□ -0.92
HDAC6-222ENST00000478095 PRRC2CQ9Y520 2896 aaKnown RBP9.32□□□□□ -0.92
HDAC6-222ENST00000478095 HELZ2Q9BYK8 2649 aaKnown RBP9.32□□□□□ -0.92
HDAC6-222ENST00000478095 A0A1W2PQD3 144 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms