RNA–Protein interactions for RNA: ENST00000478087.5

HPS1-211, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 971 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-211ENST00000478087 SLC9A6Q92581 669 aa11.77□□□□□ -0.53
HPS1-211ENST00000478087 HOXB13Q92826 284 aaPredicted RBP11.77□□□□□ -0.53
HPS1-211ENST00000478087 RNASE6Q93091 150 aaKnown RBP11.77□□□□□ -0.53
HPS1-211ENST00000478087 PPP1R36Q96LQ0 422 aa11.77□□□□□ -0.53
HPS1-211ENST00000478087 GPATCH1Q9BRR8 931 aaKnown RBP11.77□□□□□ -0.53
HPS1-211ENST00000478087 SIKE1Q9BRV8 207 aa11.77□□□□□ -0.53
HPS1-211ENST00000478087 NUF2Q9BZD4 464 aa11.77□□□□□ -0.53
HPS1-211ENST00000478087 AKTIPQ9H8T0 292 aa11.77□□□□□ -0.53
HPS1-211ENST00000478087 Q9N2J8 555 aa11.77□□□□□ -0.53
HPS1-211ENST00000478087 SIRT3Q9NTG7 399 aaPredicted RBP11.77□□□□□ -0.53
HPS1-211ENST00000478087 MRPS18CQ9Y3D5 142 aaKnown RBP11.77□□□□□ -0.53
HPS1-211ENST00000478087 ZNF337Q9Y3M9 751 aa11.77□□□□□ -0.53
HPS1-211ENST00000478087 VPS13CQ709C8 3753 aa11.76□□□□□ -0.53
HPS1-211ENST00000478087 EEF1E1-BLOC1S5C9J1V9 151 aa11.76□□□□□ -0.53
HPS1-211ENST00000478087 EEF1E1O43324 174 aaKnown RBP11.76□□□□□ -0.53
HPS1-211ENST00000478087 CTAG2O75638 210 aa11.76□□□□□ -0.53
HPS1-211ENST00000478087 NKX2-2O95096 273 aa11.76□□□□□ -0.53
HPS1-211ENST00000478087 CHMP24386 653 aa11.76□□□□□ -0.53
HPS1-211ENST00000478087 RNF144AP50876 292 aaPredicted RBP11.76□□□□□ -0.53
HPS1-211ENST00000478087 DSCR4P56555 118 aaPredicted RBP11.76□□□□□ -0.53
HPS1-211ENST00000478087 TESK1Q15569 626 aa11.76□□□□□ -0.53
HPS1-211ENST00000478087 ZNHIT3Q15649 155 aaPredicted RBP11.76□□□□□ -0.53
HPS1-211ENST00000478087 DPY19L1Q2PZI1 675 aa11.76□□□□□ -0.53
HPS1-211ENST00000478087 CCNJQ5T5M9 372 aa11.76□□□□□ -0.53
HPS1-211ENST00000478087 LUZP2Q86TE4 346 aa11.76□□□□□ -0.53
HPS1-211ENST00000478087 GATSQ8NAP1 163 aa11.76□□□□□ -0.53
HPS1-211ENST00000478087 CEP70Q8NHQ1 597 aa11.76□□□□□ -0.53
HPS1-211ENST00000478087 ACTRT2Q8TDY3 377 aa11.76□□□□□ -0.53
HPS1-211ENST00000478087 ZBED6CLQ96FA7 236 aaPredicted RBP11.76□□□□□ -0.53
HPS1-211ENST00000478087 MAELQ96JY0 434 aaKnown RBP11.76□□□□□ -0.53
HPS1-211ENST00000478087 ACSS1Q9NUB1 689 aaPredicted RBP11.76□□□□□ -0.53
HPS1-211ENST00000478087 FAM120CQ9NX05 1096 aaKnown RBP11.76□□□□□ -0.53
HPS1-211ENST00000478087 JKAMPQ9P055 326 aa11.76□□□□□ -0.53
HPS1-211ENST00000478087 NTMQ9P121 344 aa11.76□□□□□ -0.53
HPS1-211ENST00000478087 CLCF1Q9UBD9 225 aa11.76□□□□□ -0.53
HPS1-211ENST00000478087 ATP6V1HQ9UI12 483 aa11.76□□□□□ -0.53
HPS1-211ENST00000478087 ACANP16112 2415 aa11.75□□□□□ -0.53
HPS1-211ENST00000478087 OR2M5A3KFT3 312 aa11.75□□□□□ -0.53
HPS1-211ENST00000478087 SDHDO14521 159 aa11.75□□□□□ -0.53
HPS1-211ENST00000478087 SCAMP2O15127 329 aaKnown RBP11.75□□□□□ -0.53
HPS1-211ENST00000478087 EMC8O43402 210 aa11.75□□□□□ -0.53
HPS1-211ENST00000478087 KCNK2O95069 426 aa11.75□□□□□ -0.53
HPS1-211ENST00000478087 RCBTB2O95199 551 aa11.75□□□□□ -0.53
HPS1-211ENST00000478087 ANGPTL1O95841 491 aa11.75□□□□□ -0.53
HPS1-211ENST00000478087 OPN1LWP04000 364 aa11.75□□□□□ -0.53
HPS1-211ENST00000478087 KITP10721 976 aa11.75□□□□□ -0.53
HPS1-211ENST00000478087 GCKP35557 465 aa11.75□□□□□ -0.53
HPS1-211ENST00000478087 CLNS1AP54105 237 aaKnown RBP11.75□□□□□ -0.53
HPS1-211ENST00000478087 CLDN8P56748 225 aa11.75□□□□□ -0.53
HPS1-211ENST00000478087 CLDN20P56880 219 aa11.75□□□□□ -0.53
HPS1-211ENST00000478087 SF3B4Q15427 424 aaKnown RBP eCLIP11.75□□□□□ -0.533e-7■■■■□ 25.9
HPS1-211ENST00000478087 FBXL19-AS1Q494R0 122 aa11.75□□□□□ -0.53
HPS1-211ENST00000478087 EXOSC6Q5RKV6 272 aaKnown RBP11.75□□□□□ -0.53
HPS1-211ENST00000478087 RAET1LQ5VY80 246 aa11.75□□□□□ -0.53
HPS1-211ENST00000478087 MFSD12Q6NUT3 480 aa11.75□□□□□ -0.53
HPS1-211ENST00000478087 AAGABQ6PD74 315 aa11.75□□□□□ -0.53
HPS1-211ENST00000478087 FAM110BQ8TC76 370 aa11.75□□□□□ -0.53
HPS1-211ENST00000478087 FIG4Q92562 907 aa11.75□□□□□ -0.53
HPS1-211ENST00000478087 WNT2BQ93097 391 aa11.75□□□□□ -0.53
HPS1-211ENST00000478087 FAM120BQ96EK7 910 aaKnown RBP11.75□□□□□ -0.53
HPS1-211ENST00000478087 UCN2Q96RP3 112 aa11.75□□□□□ -0.53
HPS1-211ENST00000478087 DNAJB12Q9NXW2 375 aaKnown RBP11.75□□□□□ -0.53
HPS1-211ENST00000478087 MARCOQ9UEW3 520 aaPredicted RBP11.75□□□□□ -0.53
HPS1-211ENST00000478087 ABCG2Q9UNQ0 655 aa11.75□□□□□ -0.53
HPS1-211ENST00000478087 KCNE3Q9Y6H6 103 aa11.75□□□□□ -0.53
HPS1-211ENST00000478087 USH1CQ9Y6N9 552 aa11.75□□□□□ -0.53
HPS1-211ENST00000478087 SETD2Q9BYW2 2564 aaPredicted RBP11.75□□□□□ -0.53
HPS1-211ENST00000478087 NPIPA5A0A0B4J1W7 369 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 A0A1W2PRB8 838 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 FAM221AA4D161 298 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 TTC36A6NLP5 189 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 NPIPA7E9PJI5 369 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 H3BML4 177 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 KCNH1O95259 989 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 OXSR1O95747 527 aaPredicted RBP11.74□□□□□ -0.53
HPS1-211ENST00000478087 HMGN2P05204 90 aaKnown RBP11.74□□□□□ -0.53
HPS1-211ENST00000478087 NPIPA8P0DM63 369 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 IDO1P14902 403 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 DNAJA1P31689 397 aaKnown RBP11.74□□□□□ -0.53
HPS1-211ENST00000478087 OPRM1P35372 400 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 PRR5P85299 388 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 MLC1Q15049 377 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 GSTA3Q16772 222 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 CAMKMTQ7Z624 323 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 CLEC4FQ8N1N0 589 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 CDRT4Q8N9R6 151 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 SMPDL3BQ92485 455 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 C1GALT1C1Q96EU7 318 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 ZNF845Q96IR2 970 aaPredicted RBP11.74□□□□□ -0.53
HPS1-211ENST00000478087 CCDC28BQ9BUN5 200 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 POLDIP3Q9BY77 421 aaKnown RBP11.74□□□□□ -0.53
HPS1-211ENST00000478087 TBL1XR1Q9BZK7 514 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 DPY30Q9C005 99 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 CCDC134Q9H6E4 229 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 CXorf36Q9H7Y0 433 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 C3orf14Q9HBI5 128 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 SDHAF3Q9NRP4 125 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 MRGBPQ9NV56 204 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 VDAC3Q9Y277 283 aa11.74□□□□□ -0.53
HPS1-211ENST00000478087 SNX8Q9Y5X2 465 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms