RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 ERVK-21P61565 698 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 COPZ1P61923 177 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 RPS21P63220 83 aaKnown RBP4.62□□□□□ -1.67
SF3B6-202ENST00000478050 PRR5P85299 388 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 ZNF91Q05481 1191 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 TGM3Q08188 693 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 MLLT11Q13015 90 aaPredicted RBP4.62□□□□□ -1.67
SF3B6-202ENST00000478050 GPM6BQ13491 265 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 RUNX3Q13761 415 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 ENPP2Q13822 863 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 C1DQ13901 141 aaKnown RBP4.62□□□□□ -1.67
SF3B6-202ENST00000478050 KRT33BQ14525 404 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 SLC9A5Q14940 896 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 SEC23BQ15437 767 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 MLF2Q15773 248 aaPredicted RBP4.62□□□□□ -1.67
SF3B6-202ENST00000478050 SYPL1Q16563 259 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 DUSP6Q16828 381 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 TMEM44Q2T9K0 475 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 INAVAQ3KP66 663 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 KLHL22Q53GT1 634 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 SPANXN2Q5MJ10 180 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 ENTPD8Q5MY95 495 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 SLC25A30Q5SVS4 291 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 NDUFAF5Q5TEU4 345 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 ZNF776Q68DI1 518 aaPredicted RBP4.62□□□□□ -1.67
SF3B6-202ENST00000478050 C1orf94Q6P1W5 598 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 TMC5Q6UXY8 1006 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.62□□□□□ -1.67
SF3B6-202ENST00000478050 GET4Q7L5D6 327 aaPredicted RBP4.62□□□□□ -1.67
SF3B6-202ENST00000478050 SZRD1Q7Z422 152 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 ADCK2Q7Z695 626 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 CCDC190Q86UF4 302 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 YAF2Q8IY57 180 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 NLGN4XQ8N0W4 816 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 HDDC3Q8N4P3 179 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 FAM26EQ8N5C1 309 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 C12orf76Q8N812 135 aaPredicted RBP4.62□□□□□ -1.67
SF3B6-202ENST00000478050 LINC01555Q8NAE3 123 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 MFSD9Q8NBP5 474 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 SLC16A11Q8NCK7 471 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 PROKR2Q8NFJ6 384 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 OR2L5Q8NG80 312 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 OR4D11Q8NGI4 311 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 OR2A1Q8NGT9 310 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 VANGL1Q8TAA9 524 aaPredicted RBP4.62□□□□□ -1.67
SF3B6-202ENST00000478050 GNPDA2Q8TDQ7 276 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 XAGE5Q8WWM1 108 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 FGF13Q92913 245 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 C1orf159Q96HA4 380 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 CEP19Q96LK0 163 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 CCDC140Q96MF4 163 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 OPALINQ96PE5 141 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 TRNT1Q96Q11 434 aaKnown RBP4.62□□□□□ -1.67
SF3B6-202ENST00000478050 OR5M11Q96RB7 305 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 TREX2Q9BQ50 279 aaPredicted RBP4.62□□□□□ -1.67
SF3B6-202ENST00000478050 CENPOQ9BU64 300 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 CCDC32Q9BV29 185 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 SARGQ9BW04 601 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 MND1Q9BWT6 205 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 TSSK6Q9BXA6 273 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 POLDIP3Q9BY77 421 aaKnown RBP4.62□□□□□ -1.67
SF3B6-202ENST00000478050 PRRG3Q9BZD7 231 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 ROGDIQ9GZN7 287 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 NUAK2Q9H093 628 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 ABCG4Q9H172 646 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 SERHL2Q9H4I8 314 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 ANKRD19PQ9H560 264 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 ARMC7Q9H6L4 198 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 IFT22Q9H7X7 185 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 C3orf14Q9HBI5 128 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 MRPS30Q9NP92 439 aaKnown RBP4.62□□□□□ -1.67
SF3B6-202ENST00000478050 ABCB10Q9NRK6 738 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 TM7SF3Q9NS93 570 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 ZCCHC3Q9NUD5 404 aaKnown RBP4.62□□□□□ -1.67
SF3B6-202ENST00000478050 IMP3Q9NV31 184 aaKnown RBP4.62□□□□□ -1.67
SF3B6-202ENST00000478050 DNAJC27Q9NZQ0 273 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 CALML5Q9NZT1 146 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 C5AR2Q9P296 337 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 ANKMY1Q9P2S6 941 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 CD207Q9UJ71 328 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 SLC13A4Q9UKG4 626 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 STUB1Q9UNE7 303 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 LIPT1Q9Y234 373 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 KLHL20Q9Y2M5 609 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 LSM2Q9Y333 95 aaKnown RBP4.62□□□□□ -1.67
SF3B6-202ENST00000478050 HEBP2Q9Y5Z4 205 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 STON1Q9Y6Q2 735 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 R4GN57 208 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 GOLGA4Q13439 2230 aaKnown RBP4.62□□□□□ -1.67
SF3B6-202ENST00000478050 SCN2AQ99250 2005 aa4.62□□□□□ -1.67
SF3B6-202ENST00000478050 IGKV1-8A0A0C4DH67 115 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 A0A0G2JN53 185 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 HYKKA2RU49 373 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 GSAPA4D1B5 854 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 ZNF891A8MT65 544 aaPredicted RBP4.61□□□□□ -1.67
SF3B6-202ENST00000478050 M0R3H8 397 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 MYL12BO14950 172 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 ERI3O43414 337 aaKnown RBP4.61□□□□□ -1.67
SF3B6-202ENST00000478050 SIGLEC6O43699 453 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 CSO75390 466 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms