RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 HBA1P69905 142 aa16.04■□□□□ 0.16
PTPN7-209ENST00000477554 MRPS22P82650 360 aaKnown RBP16.04■□□□□ 0.16
PTPN7-209ENST00000477554 ART3Q13508 389 aa16.04■□□□□ 0.16
PTPN7-209ENST00000477554 GRAMD1BQ3KR37 738 aa16.04■□□□□ 0.16
PTPN7-209ENST00000477554 TIGD2Q4W5G0 525 aa16.04■□□□□ 0.16
PTPN7-209ENST00000477554 COQ5Q5HYK3 327 aa16.04■□□□□ 0.16
PTPN7-209ENST00000477554 CCDC121Q6ZUS5 278 aa16.04■□□□□ 0.16
PTPN7-209ENST00000477554 ANKRD46Q86W74 232 aa16.04■□□□□ 0.16
PTPN7-209ENST00000477554 ULK2Q8IYT8 1036 aa16.04■□□□□ 0.16
PTPN7-209ENST00000477554 POU5F2Q8N7G0 328 aa16.04■□□□□ 0.16
PTPN7-209ENST00000477554 GPR151Q8TDV0 419 aa16.04■□□□□ 0.16
PTPN7-209ENST00000477554 VPS33AQ96AX1 596 aa16.04■□□□□ 0.16
PTPN7-209ENST00000477554 TMCO6Q96DC7 493 aa16.04■□□□□ 0.16
PTPN7-209ENST00000477554 SLC52A3Q9NQ40 469 aa16.04■□□□□ 0.16
PTPN7-209ENST00000477554 ZCCHC3Q9NUD5 404 aaKnown RBP16.04■□□□□ 0.16
PTPN7-209ENST00000477554 QPCTLQ9NXS2 382 aa16.04■□□□□ 0.16
PTPN7-209ENST00000477554 MED11Q9P086 117 aa16.04■□□□□ 0.16
PTPN7-209ENST00000477554 LEF1Q9UJU2 399 aaPredicted RBP16.04■□□□□ 0.16
PTPN7-209ENST00000477554 A0A0G2JNJ9 132 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 PRSS51A0A1B0GVH4 220 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 FAM90A27PA6NNH2 459 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 RNASET2O00584 256 aaKnown RBP16.03■□□□□ 0.16
PTPN7-209ENST00000477554 BCKDKO14874 412 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 EMC8O43402 210 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 ZIC3O60481 467 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 ATP5HO75947 161 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 SLITRK5O94991 958 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 NKX2-2O95096 273 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 UTS2O95399 124 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 CLDN14O95500 239 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 HMGN2P05204 90 aaKnown RBP16.03■□□□□ 0.16
PTPN7-209ENST00000477554 RPP38P78345 283 aaKnown RBP16.03■□□□□ 0.16
PTPN7-209ENST00000477554 SNTA1Q13424 505 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 EFR3AQ14156 821 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 LASP1Q14847 261 aaKnown RBP16.03■□□□□ 0.16
PTPN7-209ENST00000477554 ZNF630Q2M218 657 aaPredicted RBP16.03■□□□□ 0.16
PTPN7-209ENST00000477554 CYP27C1Q4G0S4 372 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 MTFR2Q6P444 385 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 XKRXQ6PP77 449 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 PLCZ1Q86YW0 608 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 PCYOX1LQ8NBM8 494 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 NAXEQ8NCW5 288 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 OR5M1Q8NGP8 315 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 OR4C3Q8NH37 302 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 ZFP28Q8NHY6 868 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 CDS1Q92903 461 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 SARAFQ96BY9 339 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 MS4A4EQ96PG1 132 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 NPAS1Q99742 590 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 EFCAB1Q9HAE3 211 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 Q9N2J8 555 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 GPATCH2Q9NW75 528 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 Q9UFV3 132 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 RPH3AQ9Y2J0 694 aaPredicted RBP16.03■□□□□ 0.16
PTPN7-209ENST00000477554 HCFC1P51610 2035 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 LRBAP50851 2863 aa16.03■□□□□ 0.16
PTPN7-209ENST00000477554 NPIPA5A0A0B4J1W7 369 aa16.02■□□□□ 0.16
PTPN7-209ENST00000477554 SHISA8B8ZZ34 492 aa16.02■□□□□ 0.16
PTPN7-209ENST00000477554 NPIPA7E9PJI5 369 aa16.02■□□□□ 0.16
PTPN7-209ENST00000477554 SCN2BO60939 215 aa16.02■□□□□ 0.16
PTPN7-209ENST00000477554 ABCB7O75027 752 aa16.02■□□□□ 0.16
PTPN7-209ENST00000477554 KCNK2O95069 426 aa16.02■□□□□ 0.16
PTPN7-209ENST00000477554 NPIPA8P0DM63 369 aa16.02■□□□□ 0.16
PTPN7-209ENST00000477554 CD1EP15812 388 aa16.02■□□□□ 0.16
PTPN7-209ENST00000477554 KRT20P35900 424 aa16.02■□□□□ 0.16
PTPN7-209ENST00000477554 SMSP52788 366 aa16.02■□□□□ 0.16
PTPN7-209ENST00000477554 MLC1Q15049 377 aa16.02■□□□□ 0.16
PTPN7-209ENST00000477554 DECR1Q16698 335 aa16.02■□□□□ 0.16
PTPN7-209ENST00000477554 C1orf185Q5T7R7 199 aa16.02■□□□□ 0.16
PTPN7-209ENST00000477554 WLSQ5T9L3 541 aa16.02■□□□□ 0.16
PTPN7-209ENST00000477554 VASNQ6EMK4 673 aa16.02■□□□□ 0.16
PTPN7-209ENST00000477554 GATSQ8NAP1 163 aa16.02■□□□□ 0.16
PTPN7-209ENST00000477554 PSMA8Q8TAA3 256 aa16.02■□□□□ 0.16
PTPN7-209ENST00000477554 WDYHV1Q96HA8 205 aa16.02■□□□□ 0.16
PTPN7-209ENST00000477554 ITCHQ96J02 903 aa16.02■□□□□ 0.16
PTPN7-209ENST00000477554 G6PC3Q9BUM1 346 aa16.02■□□□□ 0.16
PTPN7-209ENST00000477554 DSN1Q9H410 356 aa16.02■□□□□ 0.16
PTPN7-209ENST00000477554 BTNL2Q9UIR0 455 aa16.02■□□□□ 0.16
PTPN7-209ENST00000477554 PCDHGB4Q9UN71 923 aa16.02■□□□□ 0.16
PTPN7-209ENST00000477554 HNRNPCL1O60812 293 aaKnown RBP16.02■□□□□ 0.15
PTPN7-209ENST00000477554 NPPAP01160 153 aa16.02■□□□□ 0.15
PTPN7-209ENST00000477554 IFI6P09912 130 aa16.02■□□□□ 0.15
PTPN7-209ENST00000477554 ELAVL4P26378 380 aaKnown RBP16.02■□□□□ 0.15
PTPN7-209ENST00000477554 CCT3P49368 545 aaKnown RBP16.02■□□□□ 0.15
PTPN7-209ENST00000477554 B3GALT5-AS1P59052 145 aa16.02■□□□□ 0.15
PTPN7-209ENST00000477554 TFF3Q07654 80 aa16.02■□□□□ 0.15
PTPN7-209ENST00000477554 BNIP1Q12981 228 aa16.02■□□□□ 0.15
PTPN7-209ENST00000477554 TP53BP2Q13625 1128 aa16.02■□□□□ 0.15
PTPN7-209ENST00000477554 ZSCAN26Q16670 478 aa16.02■□□□□ 0.15
PTPN7-209ENST00000477554 REP15Q6BDI9 236 aa16.02■□□□□ 0.15
PTPN7-209ENST00000477554 B3GNT6Q6ZMB0 384 aa16.02■□□□□ 0.15
PTPN7-209ENST00000477554 FADS6Q8N9I5 356 aa16.02■□□□□ 0.15
PTPN7-209ENST00000477554 CDRT4Q8N9R6 151 aa16.02■□□□□ 0.15
PTPN7-209ENST00000477554 OR2M3Q8NG83 312 aa16.02■□□□□ 0.15
PTPN7-209ENST00000477554 OR5D16Q8NGK9 328 aa16.02■□□□□ 0.15
PTPN7-209ENST00000477554 FAM110BQ8TC76 370 aa16.02■□□□□ 0.15
PTPN7-209ENST00000477554 OR5P2Q8WZ92 322 aa16.02■□□□□ 0.15
PTPN7-209ENST00000477554 JADE3Q92613 823 aa16.02■□□□□ 0.15
PTPN7-209ENST00000477554 OR2B2Q9GZK3 357 aa16.02■□□□□ 0.15
PTPN7-209ENST00000477554 NPDC1Q9NQX5 325 aaPredicted RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms