RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 DNAJA2O60884 412 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 NGFRP08138 427 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 GUSBP08236 651 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 AQP1P29972 269 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 DNASE1L1P49184 302 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 GSK3BP49841 420 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 GZMMP51124 257 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 VMACQ2NL98 169 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 NADK2Q4G0N4 442 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 PRAMEF8Q5VWM4 474 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 PRAMEF7Q5VXH5 474 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 REEP3Q6NUK4 255 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 TMEM81Q6P7N7 255 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 HMGN2P46Q86SG4 172 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 SLC30A8Q8IWU4 369 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 METTL25Q8N6Q8 603 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 POGLUT1Q8NBL1 392 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 HIPK4Q8NE63 616 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 OR4C3Q8NH37 302 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 RNF138Q8WVD3 245 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 ZNF597Q96LX8 424 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 ZNF583Q96ND8 569 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 DOHHQ9BU89 302 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 QRSL1Q9H0R6 528 aaKnown RBP14.03□□□□□ -0.16
SEC13-215ENST00000477547 CACYBPQ9HB71 228 aaKnown RBP14.03□□□□□ -0.16
SEC13-215ENST00000477547 GALNT9Q9HCQ5 603 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 UBQLN4Q9NRR5 601 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 TMEM181Q9P2C4 612 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 GMPR2Q9P2T1 348 aaKnown RBP14.03□□□□□ -0.16
SEC13-215ENST00000477547 WIF1Q9Y5W5 379 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 PCNX3Q9H6A9 2034 aa14.03□□□□□ -0.16
SEC13-215ENST00000477547 NPIPB9F8W1W9 429 aa14.02□□□□□ -0.17
SEC13-215ENST00000477547 TBXA2RP21731 343 aa14.02□□□□□ -0.17
SEC13-215ENST00000477547 PTGDSP41222 190 aa14.02□□□□□ -0.17
SEC13-215ENST00000477547 CASP3P42574 277 aa14.02□□□□□ -0.17
SEC13-215ENST00000477547 MASP1P48740 699 aa14.02□□□□□ -0.17
SEC13-215ENST00000477547 CLK3P49761 638 aaKnown RBP14.02□□□□□ -0.17
SEC13-215ENST00000477547 MEOX1P50221 254 aa14.02□□□□□ -0.17
SEC13-215ENST00000477547 RNF144AP50876 292 aaPredicted RBP14.02□□□□□ -0.17
SEC13-215ENST00000477547 ATP12AP54707 1039 aa14.02□□□□□ -0.17
SEC13-215ENST00000477547 SNTA1Q13424 505 aa14.02□□□□□ -0.17
SEC13-215ENST00000477547 DNAL1Q4LDG9 190 aa14.02□□□□□ -0.17
SEC13-215ENST00000477547 SAMD4BQ5PRF9 694 aaKnown RBP14.02□□□□□ -0.17
SEC13-215ENST00000477547 PDZK1Q5T2W1 519 aa14.02□□□□□ -0.17
SEC13-215ENST00000477547 CCDC121Q6ZUS5 278 aa14.02□□□□□ -0.17
SEC13-215ENST00000477547 MICU2Q8IYU8 434 aa14.02□□□□□ -0.17
SEC13-215ENST00000477547 RNF148Q8N7C7 305 aa14.02□□□□□ -0.17
SEC13-215ENST00000477547 GATSQ8NAP1 163 aa14.02□□□□□ -0.17
SEC13-215ENST00000477547 FAM98AQ8NCA5 519 aaKnown RBP14.02□□□□□ -0.17
SEC13-215ENST00000477547 OR2M7Q8NG81 312 aa14.02□□□□□ -0.17
SEC13-215ENST00000477547 PNPLA2Q96AD5 504 aa14.02□□□□□ -0.17
SEC13-215ENST00000477547 KCTD14Q9BQ13 255 aaPredicted RBP14.02□□□□□ -0.17
SEC13-215ENST00000477547 FAM173AQ9BQD7 235 aa14.02□□□□□ -0.17
SEC13-215ENST00000477547 HOXD1Q9GZZ0 328 aa14.02□□□□□ -0.17
SEC13-215ENST00000477547 SAP130Q9H0E3 1048 aa14.02□□□□□ -0.17
SEC13-215ENST00000477547 DEPPQ9NTK1 212 aa14.02□□□□□ -0.17
SEC13-215ENST00000477547 PACSIN3Q9UKS6 424 aa14.02□□□□□ -0.17
SEC13-215ENST00000477547 PCDHGB6Q9Y5F9 930 aa14.02□□□□□ -0.17
SEC13-215ENST00000477547 A0A0G2JPF8 293 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 ELOVL7A1L3X0 281 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 ANKRD33BA6NCL7 494 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 HNRNPCL2B2RXH8 293 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 HNRNPCL3B7ZW38 293 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 ALG1L2C9J202 215 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 GYG2O15488 501 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 PEX1O43933 1283 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 FADS1O60427 444 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 UGT2B17O75795 530 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 PGM3O95394 542 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 HNRNPCL4P0DMR1 293 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 RPS4Y1P22090 263 aaKnown RBP14.01□□□□□ -0.17
SEC13-215ENST00000477547 KLRB1Q12918 225 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 ZNF141Q15928 474 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 INAQ16352 499 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 INTS11Q5TA45 600 aaKnown RBP14.01□□□□□ -0.17
SEC13-215ENST00000477547 SLC30A6Q6NXT4 461 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 KRT73Q86Y46 540 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 SULF2Q8IWU5 870 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 PEX5LQ8IYB4 626 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 TEX19Q8NA77 164 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 WDR60Q8WVS4 1066 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 SLC7A6OSQ96CW6 309 aaPredicted RBP14.01□□□□□ -0.17
SEC13-215ENST00000477547 JSRP1Q96MG2 331 aaPredicted RBP14.01□□□□□ -0.17
SEC13-215ENST00000477547 CDRT15Q96T59 188 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 ANGPTL4Q9BY76 406 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 C1orf21Q9H246 121 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 BCL2L10Q9HD36 194 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 TAS2R1Q9NYW7 299 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 PPP4R1LQ9P1A2 415 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 SUCOQ9UBS9 1254 aaKnown RBP14.01□□□□□ -0.17
SEC13-215ENST00000477547 KCNE5Q9UJ90 142 aa14.01□□□□□ -0.17
SEC13-215ENST00000477547 PRPF19Q9UMS4 504 aaKnown RBP14.01□□□□□ -0.17
SEC13-215ENST00000477547 BOKQ9UMX3 212 aaPredicted RBP14.01□□□□□ -0.17
SEC13-215ENST00000477547 A0A1W2PQD3 144 aa14□□□□□ -0.17
SEC13-215ENST00000477547 PINLYPA6NC86 204 aa14□□□□□ -0.17
SEC13-215ENST00000477547 PRORSD1PA6NEY8 169 aa14□□□□□ -0.17
SEC13-215ENST00000477547 AGAP5A6NIR3 686 aa14□□□□□ -0.17
SEC13-215ENST00000477547 H3BNH8 94 aa14□□□□□ -0.17
SEC13-215ENST00000477547 KLRC4-KLRK1H3BQV0 150 aa14□□□□□ -0.17
SEC13-215ENST00000477547 NDUFB5O43674 189 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms