RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 KRTCAP2Q8N6L1 136 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 METTL25Q8N6Q8 603 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 COX18Q8N8Q8 333 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 FNDC5Q8NAU1 212 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 FBXO30Q8TB52 745 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 NUDT8Q8WV74 236 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 OR5P2Q8WZ92 322 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 DACH2Q96NX9 599 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 YIPF4Q9BSR8 244 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 C1orf50Q9BV19 199 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 PARD6BQ9BYG5 372 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 CXXC4Q9H2H0 198 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 UBQLN4Q9NRR5 601 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 DUSP22Q9NRW4 184 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 GIN1Q9NXP7 522 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 GALNT8Q9NY28 637 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.73□□□□□ -0.85
SEC13-214ENST00000476597 ST6GALNAC2Q9UJ37 374 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 PACSIN3Q9UKS6 424 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 ZNF175Q9Y473 711 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 V9GYY5 206 aaPredicted RBP9.73□□□□□ -0.85
SEC13-214ENST00000476597 EXPH5Q8NEV8 1989 aa9.73□□□□□ -0.85
SEC13-214ENST00000476597 A0A087WZY1 265 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 A0A1W2PQD3 144 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 SHISA8B8ZZ34 492 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 H3BML4 177 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 SEC14L5O43304 696 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 ITM2AO43736 263 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 SOX30O94993 753 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 GOSR1O95249 250 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 HSPA4LO95757 839 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 KIR2DL2P43627 348 aaPredicted RBP9.72□□□□□ -0.85
SEC13-214ENST00000476597 CPA2P48052 419 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 CCT3P49368 545 aaKnown RBP9.72□□□□□ -0.85
SEC13-214ENST00000476597 POU6F2P78424 691 aaPredicted RBP9.72□□□□□ -0.85
SEC13-214ENST00000476597 EMX2Q04743 252 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 SMU1Q2TAY7 513 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 SZRD1Q7Z422 152 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 BTLAQ7Z6A9 289 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 MISPQ8IVT2 679 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 ACTRT2Q8TDY3 377 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 OTUB1Q96FW1 271 aaPredicted RBP9.72□□□□□ -0.85
SEC13-214ENST00000476597 ZNF845Q96IR2 970 aaPredicted RBP9.72□□□□□ -0.85
SEC13-214ENST00000476597 STACQ99469 402 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 PRPF18Q99633 342 aaKnown RBP9.72□□□□□ -0.85
SEC13-214ENST00000476597 FOXC2Q99958 501 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 BTBD2Q9BX70 525 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 PINK1Q9BXM7 581 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 BHLHE41Q9C0J9 482 aaPredicted RBP9.72□□□□□ -0.85
SEC13-214ENST00000476597 PIGUQ9H490 435 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 CXorf36Q9H7Y0 433 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 ZNF395Q9H8N7 513 aaPredicted RBP9.72□□□□□ -0.85
SEC13-214ENST00000476597 RNF122Q9H9V4 155 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 SSU72Q9NP77 194 aaKnown RBP9.72□□□□□ -0.85
SEC13-214ENST00000476597 ZCCHC3Q9NUD5 404 aaKnown RBP9.72□□□□□ -0.85
SEC13-214ENST00000476597 CCM2LQ9NUG4 571 aaPredicted RBP9.72□□□□□ -0.85
SEC13-214ENST00000476597 ATAD3AQ9NVI7 634 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 GPATCH2Q9NW75 528 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 EDARQ9UNE0 448 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 EIF3LQ9Y262 564 aaKnown RBP9.72□□□□□ -0.85
SEC13-214ENST00000476597 ABCA4P78363 2273 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 KIAA1549Q9HCM3 1950 aa9.72□□□□□ -0.85
SEC13-214ENST00000476597 WDR91A4D1P6 747 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 C7orf72A4D263 438 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 SH3D21A4FU49 640 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 BIRC5O15392 142 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 RGS16O15492 202 aaPredicted RBP9.71□□□□□ -0.86
SEC13-214ENST00000476597 GMFGO60234 142 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 ZNF500O60304 480 aaPredicted RBP9.71□□□□□ -0.86
SEC13-214ENST00000476597 SKAP2O75563 359 aaPredicted RBP9.71□□□□□ -0.86
SEC13-214ENST00000476597 C6orf47O95873 294 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 CGAP01215 116 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 G6PDP11413 515 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 HPGDP15428 266 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 ZNF17P17021 662 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 PRPS1L1P21108 318 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 PSMA4P25789 261 aaKnown RBP9.71□□□□□ -0.86
SEC13-214ENST00000476597 CLDN8P56748 225 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 C21orf58P58505 322 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 RPS3AP61247 264 aaKnown RBP9.71□□□□□ -0.86
SEC13-214ENST00000476597 ZNF844Q08AG5 666 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 FAM27E3Q08E93 113 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 MAD2L1Q13257 205 aaPredicted RBP9.71□□□□□ -0.86
SEC13-214ENST00000476597 LASP1Q14847 261 aaKnown RBP9.71□□□□□ -0.86
SEC13-214ENST00000476597 PON3Q15166 354 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 GUSBP1Q15486 140 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 CD226Q15762 336 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 LSM12Q3MHD2 195 aaKnown RBP9.71□□□□□ -0.86
SEC13-214ENST00000476597 KRT71Q3SY84 523 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 TNFAIP8L3Q5GJ75 292 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 CCNJQ5T5M9 372 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 CDC73Q6P1J9 531 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 VWA1Q6PCB0 445 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 ZNF474Q6S9Z5 364 aaPredicted RBP9.71□□□□□ -0.86
SEC13-214ENST00000476597 GGNQ86UU5 652 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 GTPBP8Q8N3Z3 284 aaPredicted RBP9.71□□□□□ -0.86
SEC13-214ENST00000476597 CNEP1R1Q8N9A8 125 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 GATSQ8NAP1 163 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 OR56A1Q8NGH5 318 aa9.71□□□□□ -0.86
SEC13-214ENST00000476597 FNDC9Q8TBE3 224 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms