RNA–Protein interactions for RNA: ENST00000476085.1

MSH5-SAPCD1-205, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene MSH5-SAPCD1, Length 950 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-205ENST00000476085 CDRT4Q8N9R6 151 aa10.99□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 SLC16A11Q8NCK7 471 aa10.99□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 LRRN4CLQ8ND94 238 aa10.99□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 NUP43Q8NFH3 380 aa10.99□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 CEP70Q8NHQ1 597 aa10.99□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 CDC26Q8NHZ8 85 aa10.99□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 PPP1R14CQ8TAE6 165 aa10.99□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 ACTRT2Q8TDY3 377 aa10.99□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 ARSGQ96EG1 525 aa10.99□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 KLHDC3Q9BQ90 382 aa10.99□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 RHOXF2Q9BQY4 288 aa10.99□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 SLC39A3Q9BRY0 314 aa10.99□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 GATA5Q9BWX5 397 aaPredicted RBP10.99□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 TBL1XR1Q9BZK7 514 aa10.99□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 PPCSQ9HAB8 311 aa10.99□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 LRTM1Q9HBL6 345 aa10.99□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 FBXO34Q9NWN3 711 aa10.99□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 ZNF226Q9NYT6 803 aa10.99□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 DNAJC15Q9Y5T4 150 aa10.99□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 SHISA8B8ZZ34 492 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 H3BML4 177 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 AZIN1O14977 448 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 PDPK1O15530 556 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 SEC14L5O43304 696 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 KLF4O43474 513 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 RGS14O43566 566 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 THBDP07204 575 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 ACP2P11117 423 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 RPS3AP61247 264 aaKnown RBP10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 RAC1P63000 192 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 SIRPAP78324 504 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 HSPB3Q12988 150 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 PCLAFQ15004 111 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 ACKR1Q16570 336 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 DUSP5Q16690 384 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 VPS26BQ4G0F5 336 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 CFAP157Q5JU67 520 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 CPTPQ5TA50 214 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 KANK2Q63ZY3 851 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 MFSD12Q6NUT3 480 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 C10orf107Q8IVU9 208 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 GSPT2Q8IYD1 628 aaKnown RBP10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 OR6Y1Q8NGX8 325 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 PSMA8Q8TAA3 256 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 POC1BQ8TC44 478 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 GPR151Q8TDV0 419 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 CAVIN3Q969G5 261 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 PIGTQ969N2 578 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 GFM2Q969S9 779 aaKnown RBP10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 MTERF3Q96E29 417 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 ZBED6CLQ96FA7 236 aaPredicted RBP10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 FAM111AQ96PZ2 611 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 HS3ST6Q96QI5 342 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 TRMOQ9BU70 441 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 HHATLQ9HCP6 504 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 SIRT3Q9NTG7 399 aaPredicted RBP10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 GIN1Q9NXP7 522 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 BAIAP2L1Q9UHR4 511 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 TMED5Q9Y3A6 229 aa10.98□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 A0A1W2PQD3 144 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 NDUFB5O43674 189 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 EFNA2O43921 213 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 TRIM13O60858 407 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 SS18L1O75177 396 aaPredicted RBP10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 LINGO3P0C6S8 592 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 NEFHP12036 1026 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 FCGR2AP12318 317 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 BCKDHAP12694 445 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 PAX1P15863 534 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 KRT4P19013 534 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 MANFP55145 182 aaKnown RBP10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 LTBQ06643 244 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 PLPPR5Q32ZL2 321 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 STAC2Q6ZMT1 411 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 ZNF550Q7Z398 422 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 OR6K3Q8NGY3 331 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 OR10D3Q8NH80 312 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 ZBTB8AQ96BR9 441 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 C16orf58Q96GQ5 468 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 GMPPAQ96IJ6 420 aaPredicted RBP10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 MS4A4EQ96PG1 132 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 TSSK3Q96PN8 268 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 MED18Q9BUE0 208 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 EQTNQ9NQ60 294 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 UBQLN4Q9NRR5 601 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 MKS1Q9NXB0 559 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 PAQR5Q9NXK6 330 aaPredicted RBP10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 ATP6V1HQ9UI12 483 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 PROCRQ9UNN8 238 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 VDAC3Q9Y277 283 aa10.97□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 HIVEP2P31629 2446 aa10.96□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 A0A0J9YW62 118 aa10.96□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 A0A1W2PRB8 838 aa10.96□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 ESPNB1AK53 854 aa10.96□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 COPEO14579 308 aa10.96□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 ARHGEF9O43307 516 aa10.96□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 AKAP10O43572 662 aa10.96□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 CRCPO75575 148 aa10.96□□□□□ -0.65
MSH5-SAPCD1-205ENST00000476085 LINC00032P0C843 101 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms