RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 GNPDA2Q8TDQ7 276 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 MYLIPQ8WY64 445 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 C1orf74Q96LT6 269 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 USB1Q9BQ65 265 aaKnown RBP10.9□□□□□ -0.66
U2AF1-209ENST00000475639 GOLGA2P5Q9HBQ8 144 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 RAB9BQ9NP90 201 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 PRMT8Q9NR22 394 aaPredicted RBP10.9□□□□□ -0.66
U2AF1-209ENST00000475639 HIF1ANQ9NWT6 349 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 TAC3Q9UHF0 121 aa10.9□□□□□ -0.66
U2AF1-209ENST00000475639 OIP5O43482 229 aa10.9□□□□□ -0.67
U2AF1-209ENST00000475639 CERS1P27544 350 aa10.9□□□□□ -0.67
U2AF1-209ENST00000475639 RPS19P39019 145 aaKnown RBP10.9□□□□□ -0.67
U2AF1-209ENST00000475639 MAGEB1P43366 347 aa10.9□□□□□ -0.67
U2AF1-209ENST00000475639 CLRN1P58418 232 aa10.9□□□□□ -0.67
U2AF1-209ENST00000475639 IKZF1Q13422 519 aa10.9□□□□□ -0.67
U2AF1-209ENST00000475639 DOC2BQ14184 412 aa10.9□□□□□ -0.67
U2AF1-209ENST00000475639 GLYR1Q49A26 553 aaPredicted RBP10.9□□□□□ -0.67
U2AF1-209ENST00000475639 C10orf62Q5T681 223 aaPredicted RBP10.9□□□□□ -0.67
U2AF1-209ENST00000475639 PHF19Q5T6S3 580 aa10.9□□□□□ -0.67
U2AF1-209ENST00000475639 NDRG1Q92597 394 aaKnown RBP10.9□□□□□ -0.67
U2AF1-209ENST00000475639 GGHQ92820 318 aa10.9□□□□□ -0.67
U2AF1-209ENST00000475639 GPR137Q96N19 417 aa10.9□□□□□ -0.67
U2AF1-209ENST00000475639 PLCXD1Q9NUJ7 323 aa10.9□□□□□ -0.67
U2AF1-209ENST00000475639 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.89□□□□□ -0.67
U2AF1-209ENST00000475639 LINC01387J3KSC0 135 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 SLC10A3P09131 477 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 CHRNA4P43681 627 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 DAOAP59103 153 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 TAS2R30P59541 319 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 PDGFRLQ15198 375 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 SPHARQ15513 63 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 OR4D1Q15615 310 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 IGSF11Q5DX21 431 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 Q6ZPB1 254 aaPredicted RBP10.89□□□□□ -0.67
U2AF1-209ENST00000475639 CFAP77Q6ZQR2 320 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 TSTD1Q8NFU3 115 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 NETO1Q8TDF5 533 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 NUS1Q96E22 293 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 PGAP3Q96FM1 320 aaPredicted RBP10.89□□□□□ -0.67
U2AF1-209ENST00000475639 CNTNAP3BQ96NU0 1288 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 OR4K3Q96R72 315 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 MAGIXQ9H6Y5 334 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 TAS2R16Q9NYV7 291 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 NME7Q9Y5B8 376 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 FAM230AA0A1W2PPH8 454 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 RPS10-NUDT3A0A1W2PQS6 291 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 GMDSO60547 372 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 SOX30O94993 753 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 STSP08842 583 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 CD34P28906 385 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 MAP2K6P52564 334 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 ERVK-16P61578 105 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 CMTM1Q8IZ96 169 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 RSC1A1Q92681 617 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 DAZAP1Q96EP5 407 aaKnown RBP10.89□□□□□ -0.67
U2AF1-209ENST00000475639 CDK15Q96Q40 435 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 MS4A12Q9NXJ0 267 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 GPR83Q9NYM4 423 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 IL20RAQ9UHF4 553 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 TRAPPC13A5PLN9 417 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 ARNTLO00327 626 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 SEC14L5O43304 696 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 HCRTR2O43614 444 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 ZNF821O75541 412 aaPredicted RBP10.89□□□□□ -0.67
U2AF1-209ENST00000475639 SC5DO75845 299 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 SERPINE2P07093 398 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 AKR1C4P17516 323 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 KCNQ1P51787 676 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 KCNC3Q14003 757 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 SPANXN4Q5MJ08 99 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 C6orf136Q5SQH8 315 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 RNF130Q86XS8 419 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 DNAJC22Q8N4W6 341 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 MITD1Q8WV92 249 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 ZNF599Q96NL3 588 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 PITX2Q99697 317 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 GMEB2Q9UKD1 530 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 DLGAP4Q9Y2H0 992 aa10.89□□□□□ -0.67
U2AF1-209ENST00000475639 TRBV2A0A0J9YWF9 115 aa10.88□□□□□ -0.67
U2AF1-209ENST00000475639 SLC22A31A6NKX4 558 aa10.88□□□□□ -0.67
U2AF1-209ENST00000475639 B4DGG1 531 aa10.88□□□□□ -0.67
U2AF1-209ENST00000475639 ARVCFO00192 962 aa10.88□□□□□ -0.67
U2AF1-209ENST00000475639 VEGFDO43915 354 aa10.88□□□□□ -0.67
U2AF1-209ENST00000475639 AOC2O75106 756 aa10.88□□□□□ -0.67
U2AF1-209ENST00000475639 AMY2AP04746 511 aa10.88□□□□□ -0.67
U2AF1-209ENST00000475639 CD1DP15813 335 aa10.88□□□□□ -0.67
U2AF1-209ENST00000475639 DYRK1AQ13627 763 aa10.88□□□□□ -0.67
U2AF1-209ENST00000475639 LIPKQ5VXJ0 399 aa10.88□□□□□ -0.67
U2AF1-209ENST00000475639 PXKQ7Z7A4 578 aa10.88□□□□□ -0.67
U2AF1-209ENST00000475639 BEST4Q8NFU0 473 aa10.88□□□□□ -0.67
U2AF1-209ENST00000475639 OR5M3Q8NGP4 307 aa10.88□□□□□ -0.67
U2AF1-209ENST00000475639 OR51A7Q8NH64 312 aa10.88□□□□□ -0.67
U2AF1-209ENST00000475639 ST8SIA2Q92186 375 aa10.88□□□□□ -0.67
U2AF1-209ENST00000475639 SGCZQ96LD1 299 aa10.88□□□□□ -0.67
U2AF1-209ENST00000475639 COQ10AQ96MF6 247 aa10.88□□□□□ -0.67
U2AF1-209ENST00000475639 IFT22Q9H7X7 185 aa10.88□□□□□ -0.67
U2AF1-209ENST00000475639 GPX5O75715 221 aa10.88□□□□□ -0.67
U2AF1-209ENST00000475639 PAHP00439 452 aa10.88□□□□□ -0.67
U2AF1-209ENST00000475639 RRAS2P62070 204 aaPredicted RBP10.88□□□□□ -0.67
U2AF1-209ENST00000475639 NPRL3Q12980 569 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms